Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00711g00528 Petunia axillaris HOM05D003519 ORTHO05D024023 4.6e-107 391.3 214 100.0
Peaxi162Scf00711g00512 Petunia axillaris HOM05D003519 ORTHO05D004443 3.2e-31 139.4 76 86.8
Solyc04g076520.3 Solanum lycopersicum HOM05D003519 ORTHO05D004443 2.3e-29 133.3 76 80.3
Sopen04g030250 Solanum pennellii HOM05D003519 ORTHO05D004443 2.3e-29 133.3 76 80.3
PGSC0003DMG400009336 Solanum tuberosum HOM05D003519 ORTHO05D004443 5.0e-29 132.1 76 78.9
Nitab4.5_0003068g0020 Nicotiana tabacum HOM05D003519 ORTHO05D004443 4.3e-28 129.0 76 77.6
Nitab4.5_0000227g0340 Nicotiana tabacum HOM05D003519 ORTHO05D004443 7.3e-28 128.3 76 77.6
CAN.G475.7 Capsicum annuum HOM05D003519 ORTHO05D004443 2.1e-27 126.7 74 74.3
Cc00_g06200 Coffea canephora HOM05D003519 ORTHO05D004443 1.8e-26 123.6 74 74.3
AUR62000513 Chenopodium quinoa HOM05D003519 ORTHO05D004443 5.2e-26 122.1 73 75.3
CiPaw.03G118200 Carya illinoinensis HOM05D003519 ORTHO05D004443 1.5e-25 120.6 74 71.6
Manes.12G158800 Manihot esculenta HOM05D003519 ORTHO05D004443 3.4e-25 119.4 74 71.6
Rhsim08G0000500 Rhododendron simsii HOM05D003519 ORTHO05D004443 4.4e-25 119.0 74 68.9
Hma1.2p1_0310F.1_g121010 Hydrangea macrophylla HOM05D003519 ORTHO05D004443 7.5e-25 118.2 74 71.6
Hund21800 Selenicereus undatus HOM05D003519 ORTHO05D004443 7.5e-25 118.2 74 71.6
Thecc.01G137200 Theobroma cacao HOM05D003519 ORTHO05D004443 7.5e-25 118.2 74 71.6
TAR625G0887 Trochodendron aralioides HOM05D003519 ORTHO05D004443 9.8e-25 117.9 74 70.3
COL.COLO4_35812 Corchorus olitorius HOM05D003519 ORTHO05D004443 1.7e-24 117.1 74 71.6
Eucgr.H05140 Eucalyptus grandis HOM05D003519 ORTHO05D004443 1.7e-24 117.1 74 73.0
Oeu050088.1 Olea europaea HOM05D003519 ORTHO05D004443 2.9e-24 116.3 69 72.5
Oeu050089.1 Olea europaea HOM05D003519 ORTHO05D004443 2.9e-24 116.3 69 72.5
Lj2A614T30 Lonicera japonica HOM05D003519 ORTHO05D004443 3.7e-24 115.9 72 69.4
PGR102G0700 Punica granatum HOM05D003519 ORTHO05D004443 3.7e-24 115.9 74 68.9
Ah.04g157880 Amaranthus hybridus HOM05D003519 ORTHO05D004443 6.4e-24 115.2 73 68.5
COL.COLO4_35769 Corchorus olitorius HOM05D003519 ORTHO05D004443 6.4e-24 115.2 74 70.3
FvH4_1g24840 Fragaria vesca HOM05D003519 ORTHO05D004443 8.3e-24 114.8 74 70.3
GSVIVG01022332001 Vitis vinifera HOM05D003519 ORTHO05D004443 1.1e-23 114.4 74 68.9
Haze_25334 Corylus avellana HOM05D003519 ORTHO05D004443 1.9e-23 113.6 74 70.3
Sc09g0002240 Simmondsia chinensis HOM05D003519 ORTHO05D004443 1.9e-23 113.6 72 69.4
Duzib187G0434 Durio zibethinus HOM05D003519 ORTHO05D004443 2.4e-23 113.2 74 70.3
FAN26G0860 Fragaria x ananassa HOM05D003519 ORTHO05D004443 2.4e-23 113.2 74 68.9
FAN23G1921 Fragaria x ananassa HOM05D003519 ORTHO05D004443 4.1e-23 112.5 74 68.9
PSO063G6904 Papaver somniferum HOM05D003519 ORTHO05D004443 4.1e-23 112.5 74 66.2
CSS0008781 Camellia sinensis var. sinensis HOM05D003519 ORTHO05D004443 5.4e-23 112.1 74 67.6
CSS0040411 Camellia sinensis var. sinensis HOM05D003519 ORTHO05D004443 5.4e-23 112.1 74 67.6
FAN19G3005 Fragaria x ananassa HOM05D003519 ORTHO05D004443 5.4e-23 112.1 74 68.9
PSO832G0337 Papaver somniferum HOM05D003519 ORTHO05D004443 5.4e-23 112.1 74 66.2
Nn1g08957 Nelumbo nucifera HOM05D003519 ORTHO05D004443 7.1e-23 111.7 72 66.7
TWI79G1726 Tripterygium wilfordii HOM05D003519 ORTHO05D004443 7.1e-23 111.7 75 68.0
Atru.chr4.987 Acer truncatum HOM05D003519 ORTHO05D004443 9.2e-23 111.3 74 66.2
SalBow5G2644 Salvia bowleyana HOM05D003519 ORTHO05D004443 9.2e-23 111.3 74 64.9
SGA_v2.0_scaffold3G01832 Striga asiatica HOM05D003519 ORTHO05D004443 9.2e-23 111.3 69 69.6
Ciclev10000587m.g Citrus clementina HOM05D003519 ORTHO05D004443 1.2e-22 110.9 74 64.9
CANSAT80G2376 Cannabis sativa HOM05D003519 ORTHO05D004443 2.1e-22 110.2 74 67.6
RcHm_v2.0_Chr2g0122451 Rosa chinensis HOM05D003519 ORTHO05D004443 2.1e-22 110.2 74 67.6
EL10Ac4g09622 Beta vulgaris HOM05D003519 ORTHO05D004443 2.7e-22 109.8 73 65.8
ECA238G3965 Erigeron canadensis HOM05D003519 ORTHO05D004443 2.7e-22 109.8 74 66.2
Potri.007G102000 Populus trichocarpa HOM05D003519 ORTHO05D004443 2.7e-22 109.8 74 64.9
Gohir.A05G382700 Gossypium hirsutum HOM05D003519 ORTHO05D004443 3.5e-22 109.4 74 64.9
Potri.005G067300 Populus trichocarpa HOM05D003519 ORTHO05D004443 3.5e-22 109.4 72 65.3
TAR229G0003 Trochodendron aralioides HOM05D003519 ORTHO05D004443 3.5e-22 109.4 74 66.2
TAR381G0828 Trochodendron aralioides HOM05D003519 ORTHO05D004443 3.5e-22 109.4 74 66.2
FAN28G0413 Fragaria x ananassa HOM05D003519 ORTHO05D004443 4.6e-22 109.0 74 67.6
THA.LOC104819485 Tarenaya hassleriana HOM05D003519 ORTHO05D004443 4.6e-22 109.0 74 67.6
QL10p041283 Quercus lobata HOM05D003519 ORTHO05D004443 6.0e-22 108.6 74 64.9
MELO3C008911.2 Cucumis melo HOM05D003519 ORTHO05D004443 7.8e-22 108.2 74 64.9
Prupe.4G275200 Prunus persica HOM05D003519 ORTHO05D004443 7.8e-22 108.2 74 64.9
arahy.Tifrunner.gnm1.ann1.CM19QL Arachis hypogaea HOM05D003519 ORTHO05D004443 1.0e-21 107.8 74 67.6
arahy.Tifrunner.gnm1.ann1.JB39ED Arachis hypogaea HOM05D003519 ORTHO05D004443 1.0e-21 107.8 74 67.6
Sed0005441 Sechium edule HOM05D003519 ORTHO05D004443 1.0e-21 107.8 73 64.4
Gohir.D04G033200 Gossypium hirsutum HOM05D003519 ORTHO05D004443 1.3e-21 107.5 74 63.5
VMungo1309G2829 Vigna mungo HOM05D003519 ORTHO05D004443 1.3e-21 107.5 76 67.1
Cpa.g.sc37.5 Carica papaya HOM05D003519 ORTHO05D004443 1.7e-21 107.1 74 66.2
ClCG04G002210 Citrullus lanatus HOM05D003519 ORTHO05D004443 1.7e-21 107.1 74 64.9
CsaV3_4G030500 Cucumis sativus L. HOM05D003519 ORTHO05D004443 1.7e-21 107.1 74 63.5
Sabra05G0055300 Salix brachista HOM05D003519 ORTHO05D004443 1.7e-21 107.1 72 68.1
Sabra07G0084100 Salix brachista HOM05D003519 ORTHO05D004443 1.7e-21 107.1 74 66.2
Actinidia06577 Actinidia chinensis HOM05D003519 ORTHO05D004443 2.3e-21 106.7 74 63.5
Gorai.012G036900 Gossypium raimondii HOM05D003519 ORTHO05D004443 2.3e-21 106.7 74 63.5
MD15G1134900 Malus domestica HOM05D003519 ORTHO05D004443 2.3e-21 106.7 74 64.9
Phvul.009G154700 Phaseolus vulgaris HOM05D003519 ORTHO05D004443 2.3e-21 106.7 75 65.3
DCAR_019993 Daucus carota HOM05D003519 ORTHO05D004443 3.9e-21 105.9 74 64.9
Lsat_1_v5_gn_2_36940 Lactuca sativa HOM05D003519 ORTHO05D004443 5.1e-21 105.5 74 62.2
Lalb_Chr23g0272671 Lupinus albus HOM05D003519 ORTHO05D004443 1.1e-20 104.4 74 66.2
CDE06G0958 Ceratophyllum demersum HOM05D003519 ORTHO05D004443 1.9e-20 103.6 74 59.5
MSTRG.15264 Avicennia marina HOM05D003519 ORTHO05D004443 2.5e-20 103.2 74 60.8
Glyma.06G155700 Glycine max HOM05D003519 ORTHO05D004443 2.5e-20 103.2 69 68.1
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 2.5e-20 103.2 74 64.9
Psat5g059880 Pisum sativum HOM05D003519 ORTHO05D004443 2.5e-20 103.2 69 66.7
MBI03_g39654_MAGBIO Magnolia biondii HOM05D003519 ORTHO05D004443 5.6e-20 102.1 74 60.8
Medtr3g096670 Medicago truncatula HOM05D003519 ORTHO05D004443 7.3e-20 101.7 73 64.4
Migut.L00390 Erythranthe guttata HOM05D003519 ORTHO05D004443 9.5e-20 101.3 74 60.8
Aqoxy5G02420 Aquilegia oxysepala HOM05D003519 ORTHO05D004443 2.1e-19 100.1 75 58.7
Ca_16980_v3 Cicer arietinum L. HOM05D003519 ORTHO05D004443 2.1e-19 100.1 73 64.4
SEGI_06784 Sequoiadendron giganteum HOM05D003519 ORTHO05D004443 2.8e-19 99.8 76 57.9
TPR.G33582 Trifolium pratense HOM05D003519 ORTHO05D004443 2.8e-19 99.8 76 61.8
Migut.L00566 Erythranthe guttata HOM05D003519 ORTHO05D004443 4.7e-19 99.0 74 59.5
HPP92_006886 Vanilla planifolia HOM05D003519 ORTHO05D004443 4.7e-19 99.0 69 62.3
ATR0138G021 Amborella trichopoda HOM05D003519 ORTHO05D004443 6.2e-19 98.6 74 60.8
Lalb_Chr11g0068601 Lupinus albus HOM05D003519 ORTHO05D004443 8.1e-19 98.2 74 62.2
PSO832G1142 Papaver somniferum HOM05D003519 ORTHO05D004443 1.4e-18 97.4 75 56.0
Glyma.05G194000 Glycine max HOM05D003519 ORTHO05D004443 2.3e-18 96.7 69 63.8
Sp7g02530 Schrenkiella parvula HOM05D003519 ORTHO05D004443 2.3e-18 96.7 73 58.9
Aa31LG9G16540 Aethionema arabicum HOM05D003519 ORTHO05D004443 2.0e-17 93.6 74 56.8
Thhalv10027700m.g Eutrema salsugineum HOM05D003519 ORTHO05D004443 3.4e-17 92.8 69 56.5
Phvul.002G274400 Phaseolus vulgaris HOM05D003519 ORTHO05D004443 3.4e-17 92.8 69 59.4
VMungo0251G1228 Vigna mungo HOM05D003519 ORTHO05D004443 3.4e-17 92.8 69 60.9
Glyma.08G002000 Glycine max HOM05D003519 ORTHO05D004443 4.4e-17 92.4 69 60.9
AL7G50860 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 7.6e-17 91.7 72 56.9
AT5G39450 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 9.9e-17 91.3 69 58.0
Zm00001eb174460 Zea mays HOM05D003519 ORTHO05D004443 1.3e-16 90.9 69 52.2
PSO063G4810 Papaver somniferum HOM05D003519 ORTHO05D004443 1.7e-16 90.5 76 55.3
arahy.Tifrunner.gnm1.ann1.02NDWK Arachis hypogaea HOM05D003519 ORTHO05D004443 4.9e-16 89.0 69 59.4
arahy.Tifrunner.gnm1.ann1.I6W5T3 Arachis hypogaea HOM05D003519 ORTHO05D004443 4.9e-16 89.0 69 59.4
A04p12190 Brassica napus HOM05D003519 ORTHO05D004443 4.9e-16 89.0 74 55.4
BraA04t16883Z Brassica rapa HOM05D003519 ORTHO05D004443 4.9e-16 89.0 74 55.4
BcaB06g27330 Brassica carinata HOM05D003519 ORTHO05D004443 6.4e-16 88.6 74 55.4
CARHR262900 Cardamine hirsuta HOM05D003519 ORTHO05D004443 6.4e-16 88.6 72 55.6
Migut.L00374 Erythranthe guttata HOM05D003519 ORTHO05D004443 6.4e-16 88.6 65 56.9
BcaB06g27308 Brassica carinata HOM05D003519 ORTHO05D004443 8.4e-16 88.2 74 55.4
C04p45840 Brassica napus HOM05D003519 ORTHO05D004443 8.4e-16 88.2 74 55.4
BolC4t26170H Brassica oleracea HOM05D003519 ORTHO05D004443 8.4e-16 88.2 74 55.4
Migut.L00384 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.1e-15 87.8 65 55.4
Carub.0007s3648 Capsella rubella HOM05D003519 ORTHO05D004443 4.1e-15 85.9 65 58.5
Os08g0105100 Oryza sativa ssp. japonica HOM05D003519 ORTHO05D004443 4.1e-15 85.9 69 50.7
Pp3c17_16670 Physcomitrium patens HOM05D003519 ORTHO05D004443 2.1e-14 83.6 69 53.6
Pp3c14_13020 Physcomitrium patens HOM05D003519 ORTHO05D004443 3.5e-14 82.8 74 50.0
HPP92_025170 Vanilla planifolia HOM05D003519 ORTHO05D004443 7.8e-14 81.6 65 53.8
TPR.G37338 Trifolium pratense HOM05D003519 ORTHO05D004443 1.7e-13 80.5 74 52.7
Migut.L00372 Erythranthe guttata HOM05D003519 ORTHO05D004443 5.1e-13 79.0 69 52.2
Migut.L00383 Erythranthe guttata HOM05D003519 ORTHO05D004443 5.1e-13 79.0 69 52.2
Migut.O00452 Erythranthe guttata HOM05D003519 ORTHO05D004443 5.1e-13 79.0 69 52.2
BcaB06g27309 Brassica carinata HOM05D003519 ORTHO05D004443 6.6e-13 78.6 65 53.8
A04p12200 Brassica napus HOM05D003519 ORTHO05D004443 6.6e-13 78.6 65 53.8
C04p45850 Brassica napus HOM05D003519 ORTHO05D004443 6.6e-13 78.6 65 53.8
PSO832G2795 Papaver somniferum HOM05D003519 ORTHO05D004443 8.6e-13 78.2 73 50.7
BraA04t16884Z Brassica rapa HOM05D003519 ORTHO05D004443 1.1e-12 77.8 65 52.3
BolC4t26171H Brassica oleracea HOM05D003519 ORTHO05D004443 1.9e-12 77.0 62 54.8
AL7G50830 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 3.3e-12 76.3 73 46.6
Migut.L00523 Erythranthe guttata HOM05D003519 ORTHO05D004443 3.3e-12 76.3 64 51.6
Ca_17623_v3 Cicer arietinum L. HOM05D003519 ORTHO05D004443 4.3e-12 75.9 66 48.5
SMO137G0098 Selaginella moellendorffii HOM05D003519 ORTHO05D004443 5.6e-12 75.5 69 49.3
AL7G50850 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 7.3e-12 75.1 98 40.8
CARHR262890 Cardamine hirsuta HOM05D003519 ORTHO05D004443 7.3e-12 75.1 69 46.4
Migut.L00387 Erythranthe guttata HOM05D003519 ORTHO05D004443 9.6e-12 74.7 72 44.4
A04p12230 Brassica napus HOM05D003519 ORTHO05D004443 1.6e-11 73.9 62 53.2
CARHR258220 Cardamine hirsuta HOM05D003519 ORTHO05D004443 2.1e-11 73.6 74 45.9
BcaB06g27312 Brassica carinata HOM05D003519 ORTHO05D004443 2.8e-11 73.2 62 53.2
BcaB06g27331 Brassica carinata HOM05D003519 ORTHO05D004443 2.8e-11 73.2 62 53.2
C04p45890 Brassica napus HOM05D003519 ORTHO05D004443 2.8e-11 73.2 62 53.2
Sp7g02470 Schrenkiella parvula HOM05D003519 ORTHO05D004443 3.6e-11 72.8 82 46.3
AL7G50820 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 1.4e-10 70.9 81 45.7
Migut.L00524 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.4e-10 70.9 73 43.8
Migut.L00373 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.8e-10 70.5 68 51.5
Migut.L00385 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.8e-10 70.5 68 51.5
Migut.L00389 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.8e-10 70.5 69 43.5
Migut.L00388 Erythranthe guttata HOM05D003519 ORTHO05D004443 2.4e-10 70.1 69 43.5
Psat7g045400 Pisum sativum HOM05D003519 ORTHO05D004443 3.1e-10 69.7 67 46.3
Sp7g02490 Schrenkiella parvula HOM05D003519 ORTHO05D004443 4.0e-10 69.3 73 47.9
AT5G39490 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 5.2e-10 68.9 73 42.5
Sp7g02520 Schrenkiella parvula HOM05D003519 ORTHO05D004443 1.5e-09 67.4 68 47.1
AT5G39460 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 2.6e-09 66.6 74 43.2
BcaB06g27334 Brassica carinata HOM05D003519 ORTHO05D004443 3.4e-09 66.2 59 49.2
CARHR262850 Cardamine hirsuta HOM05D003519 ORTHO05D004443 3.4e-09 66.2 80 42.5
CDE08G0134 Ceratophyllum demersum HOM05D003519 ORTHO05D004443 1.7e-08 63.9 49 55.1
BcaB06g27311 Brassica carinata HOM05D003519 ORTHO05D004443 2.9e-08 63.2 59 47.5
C04p45870 Brassica napus HOM05D003519 ORTHO05D004443 2.9e-08 63.2 59 47.5
A04p12220 Brassica napus HOM05D003519 ORTHO05D004443 3.8e-08 62.8 59 47.5
CARHR262880 Cardamine hirsuta HOM05D003519 ORTHO05D004443 3.8e-08 62.8 69 40.6
AT5G39480 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 1.4e-07 60.8 73 41.1


User provided reference genes

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