Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00711g00414 Petunia axillaris HOM05D003937 ORTHO05D004583 3.6e-129 464.9 234 100.0
Nitab4.5_0000588g0020 Nicotiana tabacum HOM05D003937 ORTHO05D004583 4.3e-74 282.0 263 62.0
PGSC0003DMG400009905 Solanum tuberosum HOM05D003937 ORTHO05D004583 3.4e-71 272.3 301 54.5
CAN.G311.122 Capsicum annuum HOM05D003937 ORTHO05D004583 3.0e-67 259.2 262 57.3
Sopen04g036060 Solanum pennellii HOM05D003937 ORTHO05D004583 3.3e-66 255.8 262 56.5
Solyc04g082450.3 Solanum lycopersicum HOM05D003937 ORTHO05D004583 4.3e-66 255.4 262 56.5
Cc10_g00590 Coffea canephora HOM05D003937 ORTHO05D004583 3.7e-33 146.0 281 37.7
MSTRG.22102 Avicennia marina HOM05D003937 ORTHO05D004583 1.1e-32 144.4 256 37.9
MSTRG.24495 Avicennia marina HOM05D003937 ORTHO05D004583 1.1e-32 144.4 268 39.6
SalBow6G3106 Salvia bowleyana HOM05D003937 ORTHO05D004583 1.6e-31 140.6 265 36.2
Oeu033835.1 Olea europaea HOM05D003937 ORTHO05D004583 8.8e-27 124.8 264 34.5
Oeu046353.1 Olea europaea HOM05D003937 ORTHO05D004583 2.0e-26 123.6 262 34.4
Actinidia37917 Actinidia chinensis HOM05D003937 ORTHO05D004583 7.5e-26 121.7 248 37.9
Lj4A806T76 Lonicera japonica HOM05D003937 ORTHO05D004583 5.3e-24 115.5 259 32.8
vmacro04409 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 1.7e-22 110.5 264 35.6
Rhsim07G0256300 Rhododendron simsii HOM05D003937 ORTHO05D004583 6.5e-22 108.6 254 36.2
CANSAT25G1278 Cannabis sativa HOM05D003937 ORTHO05D004583 9.4e-21 104.8 226 37.2
TAR625G1504 Trochodendron aralioides HOM05D003937 ORTHO05D004583 8.8e-19 98.2 266 32.3
Migut.N02961 Erythranthe guttata HOM05D003937 ORTHO05D004583 1.5e-18 97.4 240 34.2
Nn5g30963 Nelumbo nucifera HOM05D003937 ORTHO05D004583 7.5e-18 95.1 273 30.8
QL02p014402 Quercus lobata HOM05D003937 ORTHO05D004583 9.8e-18 94.7 263 31.6
Cfa005351 Carpinus fangiana HOM05D003937 ORTHO05D004583 1.3e-17 94.4 261 31.4
SGA_v2.0_scaffold364G49977 Striga asiatica HOM05D003937 ORTHO05D004583 1.3e-17 94.4 223 34.1
ECA233G5124 Erigeron canadensis HOM05D003937 ORTHO05D004583 2.8e-17 93.2 240 35.0
TAR381G0291 Trochodendron aralioides HOM05D003937 ORTHO05D004583 3.7e-17 92.8 282 29.1
Haze_02016 Corylus avellana HOM05D003937 ORTHO05D004583 1.1e-16 91.3 261 31.0
unitig_8.g3603 Utricularia gibba HOM05D000001 ORTHO05D000003 1.4e-16 90.9 253 29.6
Actinidia32012 Actinidia chinensis HOM05D003937 ORTHO05D004583 4.1e-16 89.4 257 32.3
CANSAT25G1327 Cannabis sativa HOM05D003937 ORTHO05D004583 1.6e-15 87.4 259 29.7
PSO675G5999 Papaver somniferum HOM05D003937 ORTHO05D004583 4.5e-15 85.9 259 30.5
CiPaw.05G091700 Carya illinoinensis HOM05D003937 ORTHO05D004583 7.7e-15 85.1 254 29.9
Haze_22797 Corylus avellana HOM05D003937 ORTHO05D004583 7.7e-15 85.1 261 33.0
PSO541G3051 Papaver somniferum HOM05D003937 ORTHO05D004583 2.9e-14 83.2 263 30.4
Thecc.02G044800 Theobroma cacao HOM05D003937 ORTHO05D004583 2.9e-14 83.2 261 31.0
Dinv41880 Davidia involucrata HOM05D001927 ORTHO05D001972 1.1e-13 81.3 263 30.0
Prupe.5G011500 Prunus persica HOM05D003937 ORTHO05D004583 1.1e-13 81.3 285 30.2
Cpa.g.sc20.204 Carica papaya HOM05D003937 ORTHO05D004583 1.9e-13 80.5 253 30.4
Gohir.A01G174900 Gossypium hirsutum HOM05D003937 ORTHO05D004583 2.5e-13 80.1 250 30.4
TWI75G1612 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 4.2e-13 79.3 259 27.4
CSS0036568 Camellia sinensis var. sinensis HOM05D003937 ORTHO05D004583 7.2e-13 78.6 255 30.2
HanXRQChr12g0367561 Helianthus annuus HOM05D003937 ORTHO05D004583 7.2e-13 78.6 236 31.4
Lsat_1_v5_gn_8_26360 Lactuca sativa HOM05D003937 ORTHO05D004583 7.2e-13 78.6 197 35.0
Manes.04G067300 Manihot esculenta HOM05D003937 ORTHO05D004583 7.2e-13 78.6 260 30.8
Sc18g0006030 Simmondsia chinensis HOM05D003937 ORTHO05D004583 2.1e-12 77.0 272 29.0
VMungo0540G0354 Vigna mungo HOM05D003937 ORTHO05D004583 2.1e-12 77.0 252 31.0
Phvul.006G042500 Phaseolus vulgaris HOM05D003937 ORTHO05D004583 2.8e-12 76.6 245 30.2
CsaV3_6G031550 Cucumis sativus L. HOM05D003937 ORTHO05D004583 8.0e-12 75.1 203 31.5
Duzib052G0838 Durio zibethinus HOM05D003937 ORTHO05D004583 8.0e-12 75.1 265 31.7
Glyma.06G000500 Glycine max HOM05D003937 ORTHO05D004583 1.0e-11 74.7 250 28.4
Dinv14164 Davidia involucrata HOM05D001927 ORTHO05D001972 1.4e-11 74.3 263 27.4
Aqoxy6G01687 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 1.8e-11 73.9 250 30.0
Gohir.D02G231300 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.8e-11 73.9 259 28.6
Rhsim05G0047600 Rhododendron simsii HOM05D003937 ORTHO05D004583 1.8e-11 73.9 227 28.2
Duzib132G1231 Durio zibethinus HOM05D003937 ORTHO05D004583 2.3e-11 73.6 257 29.2
Glyma.04G000700 Glycine max HOM05D003937 ORTHO05D004583 2.3e-11 73.6 250 30.0
FvH4_5g25250 Fragaria vesca HOM05D003937 ORTHO05D004583 3.0e-11 73.2 286 28.3
Atru.chr5.3549 Acer truncatum HOM05D003937 ORTHO05D004583 4.0e-11 72.8 250 26.0
Haze_22798 Corylus avellana HOM05D003937 ORTHO05D004583 4.0e-11 72.8 247 31.6
Cfa014094 Carpinus fangiana HOM05D003937 ORTHO05D004583 5.2e-11 72.4 247 30.4
Hund06165 Selenicereus undatus HOM05D003937 ORTHO05D004583 5.2e-11 72.4 247 29.1
DCAR_013923 Daucus carota HOM05D003937 ORTHO05D004583 6.8e-11 72.0 269 28.6
Gohir.D01G166000 Gossypium hirsutum HOM05D003937 ORTHO05D004583 8.8e-11 71.6 250 29.6
Gorai.002G206500 Gossypium raimondii HOM05D003937 ORTHO05D004583 8.8e-11 71.6 250 29.6
Hma1.2p1_0271F.1_g108900 Hydrangea macrophylla HOM05D003937 ORTHO05D004583 8.8e-11 71.6 264 28.8
FAN18G0752 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.5e-10 70.9 264 28.4
RcHm_v2.0_Chr7g0215391 Rosa chinensis HOM05D003937 ORTHO05D004583 1.5e-10 70.9 263 28.9
Gorai.005G258900 Gossypium raimondii HOM05D003937 ORTHO05D004583 2.0e-10 70.5 259 28.2
Gohir.A03G209600 Gossypium hirsutum HOM05D003937 ORTHO05D004583 2.6e-10 70.1 259 28.6
Sed0010938 Sechium edule HOM05D003937 ORTHO05D004583 3.4e-10 69.7 234 29.9
arahy.Tifrunner.gnm1.ann1.G18Z51 Arachis hypogaea HOM05D003937 ORTHO05D004583 7.5e-10 68.6 249 28.5
FAN04G2017 Fragaria x ananassa HOM05D003937 ORTHO05D004583 9.8e-10 68.2 264 28.4
Potri.009G166100 Populus trichocarpa HOM05D003937 ORTHO05D004583 1.3e-09 67.8 246 31.3
FAN08G1258 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.7e-09 67.4 262 27.9
QL11p055606 Quercus lobata HOM05D003937 ORTHO05D004583 1.7e-09 67.4 259 28.2
QL11p055907 Quercus lobata HOM05D003937 ORTHO05D004583 1.7e-09 67.4 259 28.2
ClCG02G009960 Citrullus lanatus HOM05D003937 ORTHO05D004583 2.2e-09 67.0 251 27.5
MD06G1009100 Malus domestica HOM05D003937 ORTHO05D004583 2.8e-09 66.6 262 28.2
Ciclev10028873m.g Citrus clementina HOM05D003937 ORTHO05D004583 3.7e-09 66.2 240 27.9
CsaV3_6G010160 Cucumis sativus L. HOM05D003937 ORTHO05D004583 3.7e-09 66.2 259 27.4
arahy.Tifrunner.gnm1.ann1.388DF8 Arachis hypogaea HOM05D003937 ORTHO05D004583 6.3e-09 65.5 240 28.8
Dinv31951 Davidia involucrata HOM05D003937 ORTHO05D004583 1.4e-08 64.3 65 58.5
Medtr3g118500 Medicago truncatula HOM05D003937 ORTHO05D004583 1.4e-08 64.3 241 29.5
TPR.G38537 Trifolium pratense HOM05D003937 ORTHO05D004583 1.8e-08 63.9 243 28.0
vmacro17300 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 2.4e-08 63.5 243 30.0
COL.COLO4_17933 Corchorus olitorius HOM05D003937 ORTHO05D004583 4.1e-08 62.8 261 28.4
GSVIVG01009897001 Vitis vinifera HOM05D003937 ORTHO05D004583 4.1e-08 62.8 59 55.9
HanXRQChr12g0374421 Helianthus annuus HOM05D003937 ORTHO05D004583 9.2e-08 61.6 200 30.0
AUR62011702 Chenopodium quinoa HOM05D003937 ORTHO05D004583 1.2e-07 61.2 237 26.6
DCAR_015663 Daucus carota HOM05D003937 ORTHO05D004583 1.2e-07 61.2 262 26.7
DCAR_016775 Daucus carota HOM05D003937 ORTHO05D004583 1.2e-07 61.2 278 25.9
TWI79G1491 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 1.2e-07 61.2 251 24.3
vmacro08750 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 2.0e-07 60.5 45 66.7
Eucgr.I01517 Eucalyptus grandis HOM05D003937 ORTHO05D004583 2.7e-07 60.1 243 26.7
AUR62012919 Chenopodium quinoa HOM05D003937 ORTHO05D004583 4.5e-07 59.3 245 26.5
MD05G1134400 Malus domestica HOM05D003937 ORTHO05D004583 7.8e-07 58.5 245 27.3
arahy.Tifrunner.gnm1.ann1.BKYH70 Arachis hypogaea HOM05D003937 ORTHO05D004583 1.0e-06 58.2 245 26.5
MELO3C026537.2 Cucumis melo HOM05D003937 ORTHO05D004583 1.0e-06 58.2 235 26.8
MD10G1139500 Malus domestica HOM05D003937 ORTHO05D004583 1.0e-06 58.2 246 28.5
Sed0014450 Sechium edule HOM05D003937 ORTHO05D004583 2.3e-06 57.0 252 27.8
AT4G38280 Arabidopsis thaliana HOM05D003937 ORTHO05D004583 3.8e-06 56.2 143 30.8
Nitab4.5_0011212g0050 Nicotiana tabacum HOM05D003937 ORTHO05D004583 6.6e-06 55.5 261 25.7
HanXRQChr13g0409731 Helianthus annuus HOM05D003937 ORTHO05D004583 8.6e-06 55.1 151 29.1
Nn6g31719 Nelumbo nucifera HOM05D003937 ORTHO05D004583 8.6e-06 55.1 202 28.2
Solyc01g112180.4 Solanum lycopersicum HOM05D003937 ORTHO05D004583 8.6e-06 55.1 256 27.0


User provided reference genes

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