Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00611g00057 Petunia axillaris HOM05D002660 ORTHO05D003902 1.6e-118 429.5 222 100.0
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 1.1e-34 151.0 84 94.0
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-27 125.9 84 70.2
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-27 125.9 84 70.2
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-27 125.9 84 70.2
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-27 125.9 84 70.2
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-27 125.9 84 70.2
Solyc11g063540.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-27 125.9 84 70.2
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 3.8e-27 125.9 84 70.2
Sopen05g012620 Solanum pennellii HOM05D002660 ORTHO05D003902 3.8e-27 125.9 84 70.2
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 3.8e-27 125.9 84 70.2
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 3.5e-25 119.4 87 66.7
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 3.5e-25 119.4 87 66.7
Solyc03g063470.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 7.8e-25 118.2 84 66.7
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 1.1e-23 114.4 87 64.4
CAN.G993.8 Capsicum annuum HOM05D002660 ORTHO05D003902 5.6e-23 112.1 87 64.4
Peaxi162Scf00625g00034 Petunia axillaris HOM05D002660 ORTHO05D003902 9.6e-23 111.3 64 89.1
CAN.G841.4 Capsicum annuum HOM05D002660 ORTHO05D003902 8.1e-22 108.2 87 65.5
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 1.4e-21 107.5 87 62.1
PGSC0003DMG400006470 Solanum tuberosum HOM05D002660 ORTHO05D003902 1.3e-19 100.9 80 63.8
CAN.G70.3 Capsicum annuum HOM05D002660 ORTHO05D003902 6.4e-19 98.6 71 71.8
AT2G07749 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 4.6e-17 92.4 75 61.3
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 4.6e-17 92.4 75 61.3
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 4.6e-17 92.4 75 61.3
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 4.6e-17 92.4 75 61.3
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 4.6e-17 92.4 75 61.3
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 4.6e-17 92.4 75 61.3
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 4.6e-17 92.4 75 61.3
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 4.6e-17 92.4 75 61.3
CAN.G140.15 Capsicum annuum HOM05D002660 ORTHO05D003902 4.6e-17 92.4 78 61.5
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 6.0e-17 92.0 75 60.0
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 1.0e-16 91.3 75 62.7
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 1.3e-16 90.9 87 57.5
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 1.1e-15 87.8 84 54.8
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 1.1e-15 87.8 84 54.8
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 1.1e-15 87.8 84 54.8
arahy.Tifrunner.gnm1.ann1.KBVE6B Arachis hypogaea HOM05D002660 ORTHO05D003902 1.5e-15 87.4 75 57.3
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 1.5e-15 87.4 75 58.7
CAN.G1.4 Capsicum annuum HOM05D002660 ORTHO05D003902 1.5e-15 87.4 75 60.0
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 2.5e-15 86.7 85 56.5
CAN.G1001.30 Capsicum annuum HOM05D002660 ORTHO05D003902 2.5e-15 86.7 87 52.9
LjContig00315g0012920 Lotus japonicus HOM05D002660 ORTHO05D003902 6.2e-14 82.0 78 53.8
SalBow7G1147 Salvia bowleyana HOM05D002660 ORTHO05D009845 6.2e-14 82.0 78 57.7
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 6.2e-14 82.0 87 49.4
BraSC77t46647Z Brassica rapa HOM05D002660 ORTHO05D003902 1.1e-13 81.3 75 56.0
TAR371G0124 Trochodendron aralioides HOM05D002660 ORTHO05D003902 1.4e-13 80.9 82 51.2
Glyma.08G300900 Glycine max HOM05D002660 ORTHO05D003902 1.8e-13 80.5 71 56.3
Nn1g10113 Nelumbo nucifera HOM05D002660 ORTHO05D003902 4.0e-13 79.3 79 51.9
CSS0017389 Camellia sinensis var. sinensis HOM05D002660 ORTHO05D003902 6.9e-13 78.6 111 41.4
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 9.0e-13 78.2 104 46.2
BcaC08g43703 Brassica carinata HOM05D002660 ORTHO05D003902 2.6e-12 76.6 68 57.4
Lj5g0008059 Lotus japonicus HOM05D002660 ORTHO05D003902 4.5e-12 75.9 69 53.6
CAN.G26.9 Capsicum annuum HOM05D002660 ORTHO05D003902 2.9e-11 73.2 52 69.2
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 4.9e-11 72.4 96 43.8
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 4.9e-11 72.4 96 43.8
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 4.9e-11 72.4 96 43.8
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 4.9e-11 72.4 96 43.8
CAN.G505.14 Capsicum annuum HOM05D000743 ORTHO05D000580 4.9e-11 72.4 89 44.9
ATR0502G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 6.4e-11 72.0 78 48.7
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 8.4e-11 71.6 96 43.8
CsaV3_UNG194490 Cucumis sativus L. HOM05D002660 ORTHO05D003902 1.1e-10 71.2 91 47.3
Nitab4.5_0012260g0040 Nicotiana tabacum HOM05D002660 ORTHO05D003902 1.4e-10 70.9 82 46.3
Sc05g0004260 Simmondsia chinensis HOM05D002660 ORTHO05D003902 3.2e-10 69.7 65 52.3
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 5.4e-10 68.9 78 47.4
Gorai.009G406600 Gossypium raimondii HOM05D002660 ORTHO05D003902 7.1e-10 68.6 77 44.2
Actinidia02791 Actinidia chinensis HOM05D002660 ORTHO05D003902 9.3e-10 68.2 69 52.2
Sopen11g012750 Solanum pennellii HOM05D002660 ORTHO05D003902 9.3e-10 68.2 82 45.1
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.6e-09 67.4 96 40.6
Gorai.001G162700 Gossypium raimondii HOM05D002660 ORTHO05D003902 1.6e-09 67.4 72 45.8
Nitab4.5_0017902g0020 Nicotiana tabacum HOM05D002660 ORTHO05D003902 1.6e-09 67.4 130 35.4
Aa31csc1168G10 Aethionema arabicum HOM05D002660 ORTHO05D003902 2.1e-09 67.0 84 44.0
Peaxi162Scf01528g00009 Petunia axillaris HOM05D010952 ORTHO05D017366 2.1e-09 67.0 102 39.2
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 2.7e-09 66.6 77 48.1
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 2.7e-09 66.6 77 48.1
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 3.5e-09 66.2 75 48.0
Nitab4.5_0001607g0070 Nicotiana tabacum HOM05D002660 ORTHO05D003902 6.0e-09 65.5 78 44.9
Nitab4.5_0000031g0200 Nicotiana tabacum HOM05D002660 ORTHO05D003902 7.9e-09 65.1 97 42.3
Nitab4.5_0001796g0170 Nicotiana tabacum HOM05D002660 ORTHO05D003902 1.0e-08 64.7 82 42.7
Psat4g178320 Pisum sativum HOM05D002660 ORTHO05D003902 1.3e-08 64.3 72 50.0
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.8e-08 63.9 76 46.1
TPR.G40534 Trifolium pratense HOM05D002660 ORTHO05D003902 1.8e-08 63.9 64 53.1
Nitab4.5_0009256g0020 Nicotiana tabacum HOM05D002660 ORTHO05D003902 2.3e-08 63.5 82 43.9
Nitab4.5_0001152g0860 Nicotiana tabacum HOM05D002660 ORTHO05D003902 3.0e-08 63.2 103 37.9
Solyc07g008830.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.0e-08 63.2 77 45.5
CAN.G1594.3 Capsicum annuum HOM05D002660 ORTHO05D011674 3.9e-08 62.8 107 37.4
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 3.9e-08 62.8 75 46.7
SHI02522 Sapria himalayana HOM05D002660 ORTHO05D003902 6.7e-08 62.0 64 50.0
SHI41394 Sapria himalayana HOM05D002660 ORTHO05D003902 8.7e-08 61.6 52 57.7
Nitab4.5_0003758g0080 Nicotiana tabacum HOM05D002660 ORTHO05D003902 1.1e-07 61.2 61 49.2
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 1.9e-07 60.5 59 47.5
Lsat_1_v5_gn_8_124640 Lactuca sativa HOM05D002660 ORTHO05D003902 1.9e-07 60.5 76 43.4
Lsat_1_v5_gn_8_93860 Lactuca sativa HOM05D002660 ORTHO05D003902 1.9e-07 60.5 76 43.4
Lsat_1_v5_gn_5_13340 Lactuca sativa HOM05D002660 ORTHO05D003902 2.5e-07 60.1 67 44.8
Nitab4.5_0000172g2140 Nicotiana tabacum HOM05D002660 ORTHO05D003902 4.3e-07 59.3 82 41.5
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 4.3e-07 59.3 53 54.7
Medtr0212s0050 Medicago truncatula HOM05D002660 ORTHO05D003902 9.6e-07 58.2 60 53.3
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.3e-06 57.8 84 45.2
Solyc00g142170.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.3e-06 57.8 40 70.0
Solyc00g500255.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.3e-06 57.8 40 70.0
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 1.3e-06 57.8 40 70.0
Ca_07940_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 2.1e-06 57.0 49 59.2
Ca_08791_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 2.1e-06 57.0 49 59.2
Ca_22174_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 2.1e-06 57.0 49 59.2
Ca_26184_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 2.1e-06 57.0 49 59.2
MELO3C033917.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.8e-06 56.6 69 44.9
SHI35758 Sapria himalayana HOM05D024615 ORTHO05D003902 2.8e-06 56.6 60 53.3
SHI35938 Sapria himalayana HOM05D024615 ORTHO05D003902 3.6e-06 56.2 48 56.2
SGA_v2.0_scaffold245G44628 Striga asiatica HOM05D002660 ORTHO05D003902 4.8e-06 55.8 95 35.8
Peaxi162Scf00651g00640 Petunia axillaris HOM05D002660 ORTHO05D003902 6.2e-06 55.5 51 52.9


User provided reference genes

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