Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00611g00021 Petunia axillaris HOM05D004626 ORTHO05D005185 1.7e-120 436.0 220 100.0
Nitab4.5_0000308g0400 Nicotiana tabacum HOM05D004626 ORTHO05D005185 3.7e-59 232.3 151 84.1
Nitab4.5_0002169g0010 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.2e-54 217.2 142 83.8
Nitab4.5_0003026g0030 Nicotiana tabacum HOM05D004626 ORTHO05D005185 2.1e-54 216.5 142 83.8
CAN.G222.27 Capsicum annuum HOM05D004626 ORTHO05D005185 2.7e-54 216.1 144 78.5
Solyc11g011140.2 Solanum lycopersicum HOM05D004626 ORTHO05D005185 1.5e-52 210.3 150 78.0
Sopen11g005900 Solanum pennellii HOM05D004626 ORTHO05D005185 1.5e-52 210.3 150 78.0
Nitab4.5_0000004g0320 Nicotiana tabacum HOM05D004626 ORTHO05D005185 9.7e-52 207.6 142 80.3
Cc07_g15200 Coffea canephora HOM05D004626 ORTHO05D005185 3.6e-46 189.1 140 70.0
Migut.H02360 Erythranthe guttata HOM05D004626 ORTHO05D005185 1.4e-42 177.2 145 71.0
Oeu056607.1 Olea europaea HOM05D004626 ORTHO05D005185 4.5e-41 172.2 142 72.5
Dinv21908 Davidia involucrata HOM05D004626 ORTHO05D005185 1.0e-40 171.0 142 69.7
ECA232G0540 Erigeron canadensis HOM05D004626 ORTHO05D001353 1.0e-40 171.0 138 71.0
SGA_v2.0_scaffold111G31515 Striga asiatica HOM05D004626 ORTHO05D005185 2.9e-40 169.5 140 71.4
Lj4A891T55 Lonicera japonica HOM05D004626 ORTHO05D005185 3.8e-40 169.1 155 62.6
CsaV3_4G008860 Cucumis sativus L. HOM05D004626 ORTHO05D005185 1.5e-39 167.2 138 70.3
Nn2g14516 Nelumbo nucifera HOM05D004626 ORTHO05D005185 2.5e-39 166.4 134 70.1
Lsat_1_v5_gn_4_141400 Lactuca sativa HOM05D004626 ORTHO05D005185 3.2e-39 166.0 142 66.9
SGA_v2.0_scaffold54G19499 Striga asiatica HOM05D004626 ORTHO05D005185 5.5e-39 165.2 139 67.6
MSTRG.2568 Avicennia marina HOM05D004626 ORTHO05D005185 7.2e-39 164.9 141 69.5
GSVIVG01002466001 Vitis vinifera HOM05D004626 ORTHO05D005185 9.4e-39 164.5 138 68.8
DCAR_014224 Daucus carota HOM05D004626 ORTHO05D005185 1.2e-38 164.1 147 63.3
CANSAT01G3216 Cannabis sativa HOM05D004626 ORTHO05D005185 1.6e-38 163.7 140 67.9
Cfa002662 Carpinus fangiana HOM05D004626 ORTHO05D005185 1.6e-38 163.7 138 68.8
Haze_24931 Corylus avellana HOM05D004626 ORTHO05D005185 1.6e-38 163.7 138 68.8
DCAR_001782 Daucus carota HOM05D004626 ORTHO05D005185 1.6e-38 163.7 147 63.3
ClCG10G009000 Citrullus lanatus HOM05D004626 ORTHO05D005185 3.6e-38 162.5 138 68.8
HanXRQChr10g0305361 Helianthus annuus HOM05D004626 ORTHO05D005185 6.1e-38 161.8 141 67.4
CiPaw.03G141900 Carya illinoinensis HOM05D004626 ORTHO05D005185 8.0e-38 161.4 141 66.7
Phvul.008G217800 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 8.0e-38 161.4 141 65.2
Phvul.L001740 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 8.0e-38 161.4 141 65.2
Phvul.L002040 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 8.0e-38 161.4 141 65.2
TAR628G0369 Trochodendron aralioides HOM05D004626 ORTHO05D005185 2.3e-37 159.8 138 66.7
Hma1.2p1_0308F.1_g120190 Hydrangea macrophylla HOM05D004626 ORTHO05D005185 3.0e-37 159.5 140 69.3
TPR.G17855 Trifolium pratense HOM05D004626 ORTHO05D005185 3.0e-37 159.5 153 61.4
MELO3C018951.2 Cucumis melo HOM05D004626 ORTHO05D005185 5.2e-37 158.7 138 67.4
Nitab4.5_0012380g0020 Nicotiana tabacum HOM05D004626 ORTHO05D005185 5.2e-37 158.7 142 65.5
Dinv13189 Davidia involucrata HOM05D004626 ORTHO05D005185 2.6e-36 156.4 151 62.3
Actinidia28864 Actinidia chinensis HOM05D004626 ORTHO05D005185 4.4e-36 155.6 164 60.4
Lj6g0027398 Lotus japonicus HOM05D004626 ORTHO05D005185 5.7e-36 155.2 145 62.8
Cpa.g.sc974.3 Carica papaya HOM05D004626 ORTHO05D005185 7.5e-36 154.8 138 64.5
Manes.12G134800 Manihot esculenta HOM05D004626 ORTHO05D005185 9.8e-36 154.5 138 65.9
VMungo0647G0150 Vigna mungo HOM05D004626 ORTHO05D005185 9.8e-36 154.5 141 61.0
Potri.005G075500 Populus trichocarpa HOM05D004626 ORTHO05D005185 2.2e-35 153.3 142 62.7
Sc16g0005030 Simmondsia chinensis HOM05D004626 ORTHO05D005185 2.2e-35 153.3 142 62.0
Hund13624 Selenicereus undatus HOM05D004626 ORTHO05D005185 2.8e-35 152.9 138 64.5
Lalb_Chr11g0075381 Lupinus albus HOM05D004626 ORTHO05D005185 3.7e-35 152.5 142 60.6
Sed0012532 Sechium edule HOM05D004626 ORTHO05D005185 3.7e-35 152.5 156 60.3
Ca_16525_v3 Cicer arietinum L. HOM05D004626 ORTHO05D005185 4.8e-35 152.1 139 61.2
BcaNung00909 Brassica carinata HOM05D004626 ORTHO05D005185 6.3e-35 151.8 145 62.1
C01p00890 Brassica napus HOM05D004626 ORTHO05D005185 6.3e-35 151.8 145 62.1
BolC1t00090H Brassica oleracea HOM05D004626 ORTHO05D005185 6.3e-35 151.8 145 62.1
TAR381G1723 Trochodendron aralioides HOM05D004626 ORTHO05D005185 6.3e-35 151.8 138 65.2
Sabra05G0062000 Salix brachista HOM05D004626 ORTHO05D005185 1.1e-34 151.0 141 63.1
TWI53G1689 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 1.1e-34 151.0 137 64.2
Hund16286 Selenicereus undatus HOM05D004626 ORTHO05D005185 1.4e-34 150.6 141 61.7
Thhalv10026378m.g Eutrema salsugineum HOM05D004626 ORTHO05D005185 1.8e-34 150.2 140 61.4
Gohir.A11G201300 Gossypium hirsutum HOM05D004626 ORTHO05D005185 1.8e-34 150.2 144 59.0
Gorai.007G238600 Gossypium raimondii HOM05D004626 ORTHO05D005185 1.8e-34 150.2 144 59.0
Sp7g36010 Schrenkiella parvula HOM05D004626 ORTHO05D005185 2.4e-34 149.8 140 62.1
Ah.02g122510 Amaranthus hybridus HOM05D004626 ORTHO05D005185 3.1e-34 149.4 143 61.5
Gohir.D11G221600 Gossypium hirsutum HOM05D004626 ORTHO05D005185 3.1e-34 149.4 137 62.8
Sc20g0005870 Simmondsia chinensis HOM05D004626 ORTHO05D005185 3.1e-34 149.4 143 62.2
THA.LOC104807692 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 3.1e-34 149.4 137 62.8
BraA01t00081Z Brassica rapa HOM05D004626 ORTHO05D005185 4.1e-34 149.1 142 61.3
AL7G12120 Arabidopsis lyrata HOM05D004626 ORTHO05D005185 5.4e-34 148.7 137 60.6
A01p00780 Brassica napus HOM05D004626 ORTHO05D005185 5.4e-34 148.7 142 61.3
Aa31LG6G15380 Aethionema arabicum HOM05D004626 ORTHO05D005185 7.0e-34 148.3 140 63.6
CDE10G0605 Ceratophyllum demersum HOM05D004626 ORTHO05D005185 7.0e-34 148.3 139 59.0
AT4G39880 Arabidopsis thaliana HOM05D004626 ORTHO05D005185 9.1e-34 147.9 142 60.6
Duzib147G1109 Durio zibethinus HOM05D004626 ORTHO05D005185 9.1e-34 147.9 144 59.0
Psat5g090160 Pisum sativum HOM05D004626 ORTHO05D005185 9.1e-34 147.9 168 54.2
unitig_749.g13443 Utricularia gibba HOM05D004626 ORTHO05D005185 9.1e-34 147.9 150 57.3
QL06p049512 Quercus lobata HOM05D004626 ORTHO05D005185 1.2e-33 147.5 140 62.9
Thecc.01G101400 Theobroma cacao HOM05D004626 ORTHO05D005185 1.2e-33 147.5 137 63.5
Carub.0007s0181 Capsella rubella HOM05D004626 ORTHO05D005185 1.6e-33 147.1 137 61.3
Glyma.18G017100 Glycine max HOM05D004626 ORTHO05D005185 2.0e-33 146.7 141 60.3
AUR62003794 Chenopodium quinoa HOM05D004626 ORTHO05D005185 4.5e-33 145.6 139 59.0
AUR62002008 Chenopodium quinoa HOM05D004626 ORTHO05D005185 5.9e-33 145.2 139 59.0
CARHR246820 Cardamine hirsuta HOM05D004626 ORTHO05D005185 7.7e-33 144.8 140 60.7
TWI77G0829 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 1.0e-32 144.4 162 57.4
Eucgr.I00432 Eucalyptus grandis HOM05D004626 ORTHO05D005185 1.3e-32 144.1 138 60.9
MBI05_g19353_MAGBIO Magnolia biondii HOM05D004626 ORTHO05D005185 1.7e-32 143.7 92 80.4
Medtr3g087190 Medicago truncatula HOM05D004626 ORTHO05D005185 1.7e-32 143.7 173 53.2
BcaNung02302 Brassica carinata HOM05D004626 ORTHO05D005185 2.9e-32 142.9 141 58.2
Ciclev10026391m.g Citrus clementina HOM05D004626 ORTHO05D005185 2.9e-32 142.9 139 58.3
PSO541G2613 Papaver somniferum HOM05D004626 ORTHO05D005185 5.0e-32 142.1 150 56.7
PSO781G0234 Papaver somniferum HOM05D004626 ORTHO05D005185 5.0e-32 142.1 145 55.9
RcHm_v2.0_Chr2g0113491 Rosa chinensis HOM05D004626 ORTHO05D005185 1.1e-31 141.0 138 58.7
Aqoxy6G00796 Aquilegia oxysepala HOM05D004626 ORTHO05D005185 1.5e-31 140.6 150 54.7
C07p62810 Brassica napus HOM05D004626 ORTHO05D005185 1.9e-31 140.2 144 58.3
EL10Ac6g15105 Beta vulgaris HOM05D004626 ORTHO05D005185 5.5e-31 138.7 137 56.9
BcaNung06392 Brassica carinata HOM05D004626 ORTHO05D005185 5.5e-31 138.7 139 58.3
FAN19G0994 Fragaria x ananassa HOM05D004626 ORTHO05D005185 5.5e-31 138.7 140 59.3
PGR102G1283 Punica granatum HOM05D004626 ORTHO05D005185 7.2e-31 138.3 143 60.8
FAN23G0429 Fragaria x ananassa HOM05D004626 ORTHO05D005185 9.5e-31 137.9 140 58.6
A03p65840 Brassica napus HOM05D004626 ORTHO05D005185 1.6e-30 137.1 141 56.0
BraA03t15636Z Brassica rapa HOM05D004626 ORTHO05D005185 1.6e-30 137.1 141 56.0
CSS0038413 Camellia sinensis var. sinensis HOM05D004626 ORTHO05D005185 1.6e-30 137.1 147 56.5
FvH4_1g20880 Fragaria vesca HOM05D004626 ORTHO05D005185 2.1e-30 136.7 140 58.6
Prupe.6G187100 Prunus persica HOM05D004626 ORTHO05D005185 2.1e-30 136.7 137 55.5
FAN26G0520 Fragaria x ananassa HOM05D004626 ORTHO05D005185 3.6e-30 136.0 140 57.9
Duzib264G0371 Durio zibethinus HOM05D004626 ORTHO05D005185 1.0e-29 134.4 99 72.7
MD01G1030100 Malus domestica HOM05D004626 ORTHO05D005185 1.0e-29 134.4 140 53.6
arahy.Tifrunner.gnm1.ann1.ZXJH7W Arachis hypogaea HOM05D004626 ORTHO05D005185 2.3e-29 133.3 147 55.8
arahy.Tifrunner.gnm1.ann1.IYB3ER Arachis hypogaea HOM05D004626 ORTHO05D005185 5.2e-29 132.1 147 55.1
BcaNung03404 Brassica carinata HOM05D004626 ORTHO05D005185 5.2e-29 132.1 144 54.9
BolC7t46695H Brassica oleracea HOM05D004626 ORTHO05D005185 5.2e-29 132.1 144 54.9
MD15G1324000 Malus domestica HOM05D004626 ORTHO05D005185 6.8e-29 131.7 137 50.4
Atru.chr4.63 Acer truncatum HOM05D004626 ORTHO05D005185 1.5e-28 130.6 147 53.7
vmacro18600 Vaccinium macrocarpon HOM05D004626 ORTHO05D005185 1.5e-28 130.6 96 72.9
ATR0693G394 Amborella trichopoda HOM05D004626 ORTHO05D005185 2.0e-28 130.2 141 51.8
HPP92_019309 Vanilla planifolia HOM05D004626 ORTHO05D005185 2.0e-28 130.2 153 51.6
Rhsim08G0010500 Rhododendron simsii HOM05D004626 ORTHO05D005185 4.4e-28 129.0 96 69.8
TAR381G1658 Trochodendron aralioides HOM05D004626 ORTHO05D005185 5.4e-26 122.1 80 73.8
SalBow3G4134 Salvia bowleyana HOM05D004626 ORTHO05D005185 2.3e-24 116.7 132 55.3
SHI34078 Sapria himalayana HOM05D004626 ORTHO05D005185 2.9e-24 116.3 137 51.8
TPR.G17173 Trifolium pratense HOM05D004626 ORTHO05D005185 6.6e-24 115.2 62 87.1
SEGI_37892 Sequoiadendron giganteum HOM05D004626 ORTHO05D005185 2.5e-23 113.2 100 60.0
VMungo1383G1685 Vigna mungo HOM05D004626 ORTHO05D005185 1.2e-22 110.9 73 75.3
arahy.Tifrunner.gnm1.ann1.VCFG2H Arachis hypogaea HOM05D004626 ORTHO05D005185 2.8e-22 109.8 82 67.1
Nitab4.5_0006375g0050 Nicotiana tabacum HOM05D004626 ORTHO05D005185 2.8e-22 109.8 68 89.7
COL.COLO4_09965 Corchorus olitorius HOM05D004626 ORTHO05D005185 8.0e-22 108.2 61 85.2
Zm00001eb120260 Zea mays HOM05D004626 ORTHO05D005185 1.8e-21 107.1 158 41.8
Os07g0415200 Oryza sativa ssp. japonica HOM05D004626 ORTHO05D005185 2.3e-21 106.7 156 40.4
Cfa005597 Carpinus fangiana HOM05D004626 ORTHO05D005185 3.0e-21 106.3 71 70.4
FAN28G0327 Fragaria x ananassa HOM05D004626 ORTHO05D005185 3.0e-21 106.3 140 51.4
QL11p020935 Quercus lobata HOM05D004626 ORTHO05D005185 2.6e-20 103.2 66 75.8
QL11p021166 Quercus lobata HOM05D004626 ORTHO05D005185 2.6e-20 103.2 66 75.8
CiPaw.05G035400 Carya illinoinensis HOM05D004626 ORTHO05D005185 9.2e-18 94.7 94 54.3
Glyma.05G178600 Glycine max HOM05D004626 ORTHO05D005185 2.7e-17 93.2 68 67.6
Glyma.08G135700 Glycine max HOM05D004626 ORTHO05D005185 5.9e-17 92.0 68 66.2
MD06G1167700 Malus domestica HOM05D004626 ORTHO05D005185 1.9e-15 87.0 78 56.4
Lalb_Chr22g0353781 Lupinus albus HOM05D004626 ORTHO05D005185 1.2e-14 84.3 62 62.9
Pp3c1_13270 Physcomitrium patens HOM05D004626 ORTHO05D005185 1.2e-14 84.3 69 59.4
Phvul.002G256100 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 1.6e-14 84.0 69 58.0
Lalb_Chr12g0203831 Lupinus albus HOM05D004626 ORTHO05D005185 2.1e-14 83.6 62 62.9
Lj4g0016107 Lotus japonicus HOM05D004626 ORTHO05D005185 3.6e-14 82.8 78 52.6
Mapoly0065s0037 Marchantia polymorpha HOM05D004626 ORTHO05D005185 3.1e-13 79.7 79 51.9
VMungo0251G0963 Vigna mungo HOM05D004626 ORTHO05D005185 3.1e-13 79.7 69 58.0
TPR.G6292 Trifolium pratense HOM05D004626 ORTHO05D005185 4.0e-13 79.3 75 49.3
THA.LOC104818439 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 2.6e-12 76.6 73 50.7
AagrBONN_evm.TU.Sc2ySwM_117.40 Anthoceros agrestis HOM05D004626 ORTHO05D005185 2.4e-10 70.1 83 43.4
Medtr8g090225 Medicago truncatula HOM05D004626 ORTHO05D005185 2.0e-09 67.0 87 43.7
Nn1g04969 Nelumbo nucifera HOM05D004626 ORTHO05D005185 2.7e-09 66.6 57 57.9
SMO134G0295 Selaginella moellendorffii HOM05D004626 ORTHO05D005185 7.8e-09 65.1 64 50.0
CAN.G1581.1 Capsicum annuum HOM05D004626 ORTHO05D005185 1.7e-08 63.9 54 64.8
Potri.007G093100 Populus trichocarpa HOM05D004626 ORTHO05D005185 2.3e-08 63.5 155 35.5
Medtr3g079680 Medicago truncatula HOM05D004626 ORTHO05D005185 5.0e-08 62.4 123 40.7
Ciclev10029799m.g Citrus clementina HOM05D004626 ORTHO05D005185 1.9e-07 60.5 48 56.2
MCO11G885 Micromonas commoda HOM05D004626 ORTHO05D005185 7.3e-07 58.5 48 52.1
Nitab4.5_0000104g0020 Nicotiana tabacum HOM05D034732 ORTHO05D285139 9.5e-07 58.2 58 58.6


User provided reference genes

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