Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 2.6e-222 775.0 374 100.0
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.0e-186 656.8 376 83.5
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 2.1e-184 649.0 362 84.8
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 6.5e-181 637.5 371 83.0
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 4.8e-160 568.2 350 75.1
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 3.8e-157 558.5 359 73.3
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 5.0e-157 558.1 370 70.8
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 6.5e-157 557.8 350 74.3
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 4.2e-156 555.1 350 72.6
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.2e-156 554.3 361 71.7
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 1.6e-155 553.1 350 70.6
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.0e-154 550.4 349 71.9
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 6.7e-154 547.7 369 70.7
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 2.0e-153 546.2 350 69.7
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 2.0e-153 546.2 350 72.9
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 8.2e-152 540.8 388 67.8
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 1.8e-151 539.7 354 71.2
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 2.4e-151 539.3 353 72.0
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 7.0e-151 537.7 350 70.9
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 1.9e-148 529.6 350 69.1
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 3.2e-148 528.9 350 69.1
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 5.5e-148 528.1 349 70.5
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 5.5e-148 528.1 350 69.1
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 5.5e-148 528.1 350 69.1
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 9.4e-148 527.3 350 69.7
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.6e-147 526.6 350 68.9
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 2.1e-147 526.2 354 69.2
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 2.7e-147 525.8 350 69.1
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.0e-146 523.9 354 69.2
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 1.4e-146 523.5 350 68.6
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 2.0e-145 519.6 355 67.0
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 3.3e-145 518.8 350 68.9
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 5.7e-145 518.1 350 68.0
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 2.8e-144 515.8 350 69.1
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 3.7e-144 515.4 350 68.0
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 8.2e-144 514.2 351 67.8
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.8e-143 513.1 350 67.1
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 4.1e-143 511.9 329 70.8
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 9.1e-143 510.8 351 67.5
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 2.7e-142 509.2 350 67.7
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 4.5e-142 508.4 352 70.5
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 1.9e-140 503.1 353 66.6
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 2.5e-140 502.7 414 58.7
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 5.5e-140 501.5 449 55.9
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 6.1e-139 498.0 350 66.0
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.0e-138 497.3 414 57.7
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 8.8e-138 494.2 351 66.7
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 5.7e-137 491.5 350 65.7
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 8.3e-136 487.6 353 65.2
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 3.1e-135 485.7 350 65.4
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.6e-134 483.4 353 63.2
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 1.3e-133 480.3 347 63.7
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.9e-133 479.2 351 65.0
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.5e-132 476.9 351 63.2
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 2.6e-129 466.1 363 59.5
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 5.4e-127 458.4 351 62.1
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.4e-127 458.4 351 62.1
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 7.0e-127 458.0 351 61.8
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.3e-125 453.8 350 63.7
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 3.6e-123 445.7 355 60.8
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.2e-121 440.7 353 61.5
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 2.6e-121 439.5 497 47.7
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 2.7e-118 429.5 455 50.5
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 2.6e-113 412.9 285 68.8
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.0e-93 347.8 292 59.2
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 4.0e-90 335.9 363 45.7
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.2e-86 324.3 191 74.9
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.2e-86 324.3 343 54.5
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.2e-86 324.3 357 46.5
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 9.6e-84 314.7 196 73.0
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 3.1e-82 309.7 236 60.2
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 2.5e-71 273.5 214 64.5
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 4.3e-68 262.7 147 80.3
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 5.3e-66 255.8 160 70.6
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 5.8e-65 252.3 233 53.6
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 3.0e-61 240.0 248 51.6
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 3.4e-57 226.5 140 74.3
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 4.2e-55 219.5 356 36.2
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 2.1e-46 190.7 162 59.3
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 8.8e-45 185.3 428 29.7
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 3.8e-40 169.9 116 69.0
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 2.7e-38 163.7 377 31.6
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 2.3e-37 160.6 127 66.1
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.0e-28 131.0 109 56.0
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.6e-28 130.6 108 56.5
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 3.4e-28 130.2 102 65.7
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.4e-28 129.8 78 70.5
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 1.3e-27 128.3 70 75.7
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 1.3e-27 128.3 70 75.7
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 2.7e-25 120.6 69 72.5
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.8e-24 116.7 103 56.3
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.2e-22 111.7 70 78.6
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.6e-22 111.3 70 77.1
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.1e-22 109.4 70 75.7
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 6.1e-22 109.4 295 27.8
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.8e-21 107.8 70 75.7
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 6.8e-21 105.9 115 51.3
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 7.0e-18 95.9 158 39.2
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.2e-17 95.1 121 43.8
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.7e-16 91.3 91 57.1
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.8e-16 90.1 57 66.7
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.1e-15 88.6 89 47.2
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 6.1e-14 82.8 72 55.6
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.8e-13 81.3 68 51.5
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 9.2e-10 68.9 101 40.6
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 6.6e-08 62.8 119 36.1
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 1.1e-07 62.0 62 48.4


User provided reference genes

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