Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00546g00046 Petunia axillaris HOM05D013992 ORTHO05D011565 2.9e-179 631.7 305 100.0
Peaxi162Scf18773g00001 Petunia axillaris HOM05D013992 ORTHO05D011565 4.5e-116 421.8 204 100.0
Peaxi162Scf00546g00045 Petunia axillaris HOM05D013992 ORTHO05D011565 1.0e-115 420.6 205 99.5
Nitab4.5_0000259g0150 Nicotiana tabacum HOM05D012079 ORTHO05D011565 4.8e-33 146.0 192 46.9
PGSC0003DMG400046279 Solanum tuberosum HOM05D013992 ORTHO05D011565 2.4e-32 143.7 207 43.5
PGSC0003DMG400045879 Solanum tuberosum HOM05D013992 ORTHO05D011565 4.5e-31 139.4 212 46.2
PGSC0003DMG400034990 Solanum tuberosum HOM05D013992 ORTHO05D011565 3.6e-28 129.8 206 43.2
Peaxi162Scf00179g00014 Petunia axillaris HOM05D002039 ORTHO05D005834 4.7e-28 129.4 108 66.7
Peaxi162Scf00205g00134 Petunia axillaris HOM05D012079 ORTHO05D011565 6.1e-28 129.0 194 44.3
CAN.G588.77 Capsicum annuum HOM05D013992 ORTHO05D011565 1.8e-27 127.5 197 42.6
PGSC0003DMG400018170 Solanum tuberosum HOM05D013992 ORTHO05D011565 1.5e-26 124.4 163 48.5
CAN.G680.28 Capsicum annuum HOM05D013992 ORTHO05D011565 2.2e-25 120.6 211 38.9
Nitab4.5_0000283g0330 Nicotiana tabacum HOM05D012079 ORTHO05D011565 9.1e-24 115.2 202 39.1
CAN.G416.52 Capsicum annuum HOM05D012079 ORTHO05D011565 2.6e-23 113.6 231 39.0
CAN.G1271.22 Capsicum annuum HOM05D012079 ORTHO05D011565 2.2e-22 110.5 202 41.1
Peaxi162Scf00252g00020 Petunia axillaris HOM05D000017 ORTHO05D000308 3.2e-21 106.7 51 96.1
PGSC0003DMG400005156 Solanum tuberosum HOM05D012079 ORTHO05D011565 2.1e-20 104.0 168 42.3
Solyc05g010510.1 Solanum lycopersicum HOM05D013992 ORTHO05D011565 1.1e-16 91.7 162 40.7
Peaxi162Scf00205g01428 Petunia axillaris HOM05D012079 ORTHO05D011565 4.5e-15 86.3 206 33.5
Peaxi162Scf00205g01427 Petunia axillaris HOM05D012079 ORTHO05D011565 5.0e-14 82.8 164 38.4
CAN.G588.78 Capsicum annuum HOM05D013992 ORTHO05D011565 1.9e-13 80.9 138 42.0
Nitab4.5_0010778g0050 Nicotiana tabacum HOM05D012079 ORTHO05D011565 6.1e-12 75.9 103 46.6
Rhsim12G0150000 Rhododendron simsii HOM05D000007 ORTHO05D000676 1.4e-11 74.7 145 35.2
Duzib147G0121 Durio zibethinus HOM05D000007 ORTHO05D000039 3.4e-10 70.1 151 30.5
Aqoxy3G03710 Aquilegia oxysepala HOM05D015266 ORTHO05D007631 3.7e-09 66.6 150 31.3
PSO832G0591 Papaver somniferum HOM05D000007 ORTHO05D000676 4.8e-09 66.2 138 29.7
Thecc.04G089700 Theobroma cacao HOM05D000007 ORTHO05D000039 6.3e-09 65.9 154 29.9
CANSAT21G0589 Cannabis sativa HOM05D000007 ORTHO05D000039 8.3e-09 65.5 214 24.8
Haze_02856 Corylus avellana HOM05D000007 ORTHO05D000039 8.3e-09 65.5 163 30.7
Actinidia18974 Actinidia chinensis HOM05D000007 ORTHO05D008819 1.1e-08 65.1 145 34.5
Oeu011073.1 Olea europaea HOM05D000007 ORTHO05D000039 1.4e-08 64.7 234 26.1
TAR626G0319 Trochodendron aralioides HOM05D000007 ORTHO05D000017 1.4e-08 64.7 154 31.8
Actinidia35051 Actinidia chinensis HOM05D000007 ORTHO05D007631 1.8e-08 64.3 140 34.3
Actinidia35052 Actinidia chinensis HOM05D000007 ORTHO05D000676 1.8e-08 64.3 145 33.8
PSO832G3397 Papaver somniferum HOM05D000007 ORTHO05D000676 3.1e-08 63.5 169 30.2
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 4.1e-08 63.2 155 31.0
PSO210G6767 Papaver somniferum HOM05D000007 ORTHO05D000676 7.0e-08 62.4 156 30.1
Eucgr.B00632 Eucalyptus grandis HOM05D000007 ORTHO05D007631 9.1e-08 62.0 143 32.9
MD03G1174100 Malus domestica HOM05D000007 ORTHO05D000521 9.1e-08 62.0 157 30.6
PSO170G3398 Papaver somniferum HOM05D004049 ORTHO05D004496 9.1e-08 62.0 162 32.7
Lalb_Chr23g0272161 Lupinus albus HOM05D000007 ORTHO05D000017 1.2e-07 61.6 179 29.1
Gohir.A05G369700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.0e-07 60.8 166 27.1
PSO782G0708 Papaver somniferum HOM05D000007 ORTHO05D000017 2.0e-07 60.8 169 28.4
TPR.G14415 Trifolium pratense HOM05D000007 ORTHO05D000521 2.0e-07 60.8 161 32.9
TWI38G1608 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 2.0e-07 60.8 146 27.4
Aqoxy3G03706 Aquilegia oxysepala HOM05D015266 ORTHO05D007631 2.7e-07 60.5 153 31.4
TPR.G18189 Trifolium pratense HOM05D000007 ORTHO05D000521 2.7e-07 60.5 158 32.9
A04p27510 Brassica napus HOM05D001738 ORTHO05D001644 3.5e-07 60.1 174 29.9
COL.COLO4_11925 Corchorus olitorius HOM05D000007 ORTHO05D000039 3.5e-07 60.1 142 28.9
Haze_04558 Corylus avellana HOM05D000007 ORTHO05D000521 3.5e-07 60.1 153 30.1
Medtr3g058480 Medicago truncatula HOM05D000007 ORTHO05D000017 3.5e-07 60.1 156 30.8
PSO832G1314 Papaver somniferum HOM05D000007 ORTHO05D000676 3.5e-07 60.1 136 33.1
Sabra07G0023700 Salix brachista HOM05D002420 ORTHO05D002422 3.5e-07 60.1 191 28.3
Sabra07G0062400 Salix brachista HOM05D000007 ORTHO05D007631 3.5e-07 60.1 137 33.6
DCAR_004837 Daucus carota HOM05D000007 ORTHO05D000039 4.5e-07 59.7 150 30.0
FAN13G2729 Fragaria x ananassa HOM05D000007 ORTHO05D022567 4.5e-07 59.7 138 33.3
Lj7P411T12 Lonicera japonica HOM05D000007 ORTHO05D000017 4.5e-07 59.7 161 28.0
Prupe.3G111700 Prunus persica HOM05D000007 ORTHO05D000521 4.5e-07 59.7 160 30.6
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 5.9e-07 59.3 179 31.3
HanXRQChr16g0498261 Helianthus annuus HOM05D000664 ORTHO05D000491 5.9e-07 59.3 141 30.5
PSO832G2113 Papaver somniferum HOM05D000007 ORTHO05D000676 5.9e-07 59.3 129 31.0
Peaxi162Scf00188g00102 Petunia axillaris HOM05D005774 ORTHO05D006516 5.9e-07 59.3 87 39.1
Psat2g140960 Pisum sativum HOM05D000007 ORTHO05D000521 5.9e-07 59.3 148 32.4
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 5.9e-07 59.3 146 32.2
THA.LOC104818824 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 5.9e-07 59.3 142 31.0
BraA04t18245Z Brassica rapa HOM05D001738 ORTHO05D001644 7.7e-07 58.9 174 29.3
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 7.7e-07 58.9 149 28.2
Thecc.10G169000 Theobroma cacao HOM05D000007 ORTHO05D000039 7.7e-07 58.9 154 30.5
COL.COLO4_11922 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.0e-06 58.5 143 28.0
Haze_06943 Corylus avellana HOM05D000007 ORTHO05D000017 1.0e-06 58.5 150 27.3
Haze_06948 Corylus avellana HOM05D000007 ORTHO05D000017 1.0e-06 58.5 151 27.8
Dinv01180 Davidia involucrata HOM05D000007 ORTHO05D000521 1.0e-06 58.5 145 31.0
Dinv26435 Davidia involucrata HOM05D000007 ORTHO05D000521 1.0e-06 58.5 145 31.0
Oeu025158.1 Olea europaea HOM05D000007 ORTHO05D000039 1.0e-06 58.5 145 31.0
PSO824G0099 Papaver somniferum HOM05D000007 ORTHO05D000676 1.0e-06 58.5 132 32.6
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 1.0e-06 58.5 163 31.3
TPR.G29403 Trifolium pratense HOM05D000007 ORTHO05D000521 1.0e-06 58.5 159 32.1
AL3G17110 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 1.3e-06 58.2 144 30.6
Potri.007G074084 Populus trichocarpa HOM05D000007 ORTHO05D007631 1.3e-06 58.2 137 32.8
Thecc.06G029600 Theobroma cacao HOM05D000007 ORTHO05D000039 1.3e-06 58.2 153 30.7
arahy.Tifrunner.gnm1.ann1.DMZX0C Arachis hypogaea HOM05D000007 ORTHO05D000017 1.7e-06 57.8 138 31.2
PSO081G0128 Papaver somniferum HOM05D000007 ORTHO05D000676 1.7e-06 57.8 135 30.4
Aa31LG5G16750 Aethionema arabicum HOM05D000007 ORTHO05D000017 2.3e-06 57.4 146 28.1
Eucgr.L03420 Eucalyptus grandis HOM05D000007 ORTHO05D003666 2.3e-06 57.4 158 29.7
PSO339G5071 Papaver somniferum HOM05D000007 ORTHO05D000676 2.3e-06 57.4 126 34.1
PSO675G5716 Papaver somniferum HOM05D000007 ORTHO05D000676 2.3e-06 57.4 137 32.8
Prupe.1G167900 Prunus persica HOM05D000007 ORTHO05D000521 2.3e-06 57.4 140 30.0
SalBow3G0037 Salvia bowleyana HOM05D011515 ORTHO05D005165 2.3e-06 57.4 150 28.7
Thecc.10G168700 Theobroma cacao HOM05D000007 ORTHO05D000039 2.3e-06 57.4 146 30.8
Thecc.10G169200 Theobroma cacao HOM05D000007 ORTHO05D000039 2.3e-06 57.4 146 30.8
Thecc.10G169400 Theobroma cacao HOM05D000007 ORTHO05D000039 2.3e-06 57.4 154 30.5
CARHR080760 Cardamine hirsuta HOM05D000007 ORTHO05D000017 2.9e-06 57.0 163 28.8
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.9e-06 57.0 181 32.0
Medtr1g094210 Medicago truncatula HOM05D000007 ORTHO05D000017 2.9e-06 57.0 147 34.0
Haze_06941 Corylus avellana HOM05D000007 ORTHO05D000017 3.8e-06 56.6 150 26.7
PSO675G6799 Papaver somniferum HOM05D000007 ORTHO05D000676 3.8e-06 56.6 143 32.9
RcHm_v2.0_Chr3g0455861 Rosa chinensis HOM05D000007 ORTHO05D000039 3.8e-06 56.6 120 33.3
Sabra05G0102300 Salix brachista HOM05D002420 ORTHO05D002422 3.8e-06 56.6 224 27.7
AT3G17530 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.0e-06 56.2 143 30.1
Cfa006260 Carpinus fangiana HOM05D000007 ORTHO05D000521 5.0e-06 56.2 153 28.8
AUR62026585 Chenopodium quinoa HOM05D000007 ORTHO05D000017 5.0e-06 56.2 175 28.6
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.0e-06 56.2 181 31.5
MD17G1263300 Malus domestica HOM05D000007 ORTHO05D000521 5.0e-06 56.2 138 32.6
PSO675G6896 Papaver somniferum HOM05D000007 ORTHO05D000676 5.0e-06 56.2 156 28.2
PSO832G4171 Papaver somniferum HOM05D000007 ORTHO05D000676 5.0e-06 56.2 130 30.0
Eucgr.G02384 Eucalyptus grandis HOM05D000171 ORTHO05D000101 6.5e-06 55.8 147 32.7
HanXRQChr03g0067811 Helianthus annuus HOM05D000664 ORTHO05D000491 6.5e-06 55.8 148 27.7
TPR.G18192 Trifolium pratense HOM05D000007 ORTHO05D000521 6.5e-06 55.8 161 31.7
CSS0038812 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 8.6e-06 55.5 147 28.6
COL.COLO4_24613 Corchorus olitorius HOM05D000007 ORTHO05D000017 8.6e-06 55.5 157 31.2
COL.COLO4_31026 Corchorus olitorius HOM05D000007 ORTHO05D000521 8.6e-06 55.5 146 28.1
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 8.6e-06 55.5 151 29.8
Gohir.D10G123300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.6e-06 55.5 181 30.9
Lj2P412T54 Lonicera japonica HOM05D000007 ORTHO05D000521 8.6e-06 55.5 156 30.8
RcHm_v2.0_Chr6g0306731 Rosa chinensis HOM05D000007 ORTHO05D000521 8.6e-06 55.5 144 31.9


User provided reference genes

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