Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00546g00045 Petunia axillaris HOM05D013992 ORTHO05D011565 2.5e-127 458.8 224 100.0
Peaxi162Scf00546g00046 Petunia axillaris HOM05D013992 ORTHO05D011565 9.7e-116 420.2 205 99.5
Peaxi162Scf18773g00001 Petunia axillaris HOM05D013992 ORTHO05D011565 3.7e-115 418.3 204 99.5
Nitab4.5_0000259g0150 Nicotiana tabacum HOM05D012079 ORTHO05D011565 6.0e-33 145.2 192 46.9
PGSC0003DMG400046279 Solanum tuberosum HOM05D013992 ORTHO05D011565 2.3e-32 143.3 207 43.5
PGSC0003DMG400045879 Solanum tuberosum HOM05D013992 ORTHO05D011565 6.7e-32 141.7 219 45.7
PGSC0003DMG400034990 Solanum tuberosum HOM05D013992 ORTHO05D011565 2.6e-28 129.8 206 43.2
Peaxi162Scf00205g00134 Petunia axillaris HOM05D012079 ORTHO05D011565 4.5e-28 129.0 194 44.3
CAN.G588.77 Capsicum annuum HOM05D013992 ORTHO05D011565 2.2e-27 126.7 197 42.6
PGSC0003DMG400018170 Solanum tuberosum HOM05D013992 ORTHO05D011565 3.8e-27 125.9 163 49.1
CAN.G680.28 Capsicum annuum HOM05D013992 ORTHO05D011565 5.5e-26 122.1 211 39.3
Nitab4.5_0000283g0330 Nicotiana tabacum HOM05D012079 ORTHO05D011565 3.0e-24 116.3 202 39.1
CAN.G416.52 Capsicum annuum HOM05D012079 ORTHO05D011565 1.1e-23 114.4 230 39.6
CAN.G1271.22 Capsicum annuum HOM05D012079 ORTHO05D011565 2.1e-22 110.2 202 41.1
PGSC0003DMG400005156 Solanum tuberosum HOM05D012079 ORTHO05D011565 1.3e-19 100.9 168 41.7
Solyc05g010510.1 Solanum lycopersicum HOM05D013992 ORTHO05D011565 9.3e-18 94.7 181 40.3
Peaxi162Scf00205g01428 Petunia axillaris HOM05D012079 ORTHO05D011565 1.5e-15 87.4 217 32.3
Peaxi162Scf00205g01427 Petunia axillaris HOM05D012079 ORTHO05D011565 4.8e-14 82.4 164 38.4
CAN.G588.78 Capsicum annuum HOM05D013992 ORTHO05D011565 2.4e-13 80.1 137 40.9
Rhsim12G0150000 Rhododendron simsii HOM05D000007 ORTHO05D000676 1.0e-11 74.7 145 35.2
Nitab4.5_0010778g0050 Nicotiana tabacum HOM05D012079 ORTHO05D011565 5.0e-11 72.4 103 45.6
Duzib147G0121 Durio zibethinus HOM05D000007 ORTHO05D000039 2.5e-10 70.1 151 30.5
Aqoxy3G03710 Aquilegia oxysepala HOM05D015266 ORTHO05D007631 2.7e-09 66.6 150 31.3
PSO832G0591 Papaver somniferum HOM05D000007 ORTHO05D000676 3.6e-09 66.2 138 29.7
Thecc.04G089700 Theobroma cacao HOM05D000007 ORTHO05D000039 4.6e-09 65.9 154 29.9
Actinidia18974 Actinidia chinensis HOM05D000007 ORTHO05D008819 7.9e-09 65.1 145 34.5
Haze_02856 Corylus avellana HOM05D000007 ORTHO05D000039 7.9e-09 65.1 163 30.7
Lalb_Chr23g0272161 Lupinus albus HOM05D000007 ORTHO05D000017 7.9e-09 65.1 230 27.8
Actinidia35051 Actinidia chinensis HOM05D000007 ORTHO05D007631 1.4e-08 64.3 140 34.3
Actinidia35052 Actinidia chinensis HOM05D000007 ORTHO05D000676 1.4e-08 64.3 145 33.8
TAR626G0319 Trochodendron aralioides HOM05D000007 ORTHO05D000017 1.4e-08 64.3 154 31.8
Oeu011073.1 Olea europaea HOM05D000007 ORTHO05D000039 1.8e-08 63.9 234 26.1
PSO832G3397 Papaver somniferum HOM05D000007 ORTHO05D000676 2.3e-08 63.5 169 30.2
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 3.0e-08 63.2 155 31.0
CANSAT21G0589 Cannabis sativa HOM05D000007 ORTHO05D000039 5.1e-08 62.4 182 26.4
MD03G1174100 Malus domestica HOM05D000007 ORTHO05D000521 5.1e-08 62.4 157 30.6
PSO210G6767 Papaver somniferum HOM05D000007 ORTHO05D000676 5.1e-08 62.4 156 30.1
Eucgr.B00632 Eucalyptus grandis HOM05D000007 ORTHO05D007631 6.7e-08 62.0 143 32.9
PSO170G3398 Papaver somniferum HOM05D004049 ORTHO05D004496 6.7e-08 62.0 162 32.7
PSO782G0708 Papaver somniferum HOM05D000007 ORTHO05D000017 6.7e-08 62.0 169 28.4
PSO832G1314 Papaver somniferum HOM05D000007 ORTHO05D000676 1.5e-07 60.8 154 31.8
TWI38G1608 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 1.5e-07 60.8 146 27.4
HanXRQChr16g0498261 Helianthus annuus HOM05D000664 ORTHO05D000491 2.0e-07 60.5 153 30.1
PSO824G0099 Papaver somniferum HOM05D000007 ORTHO05D000676 2.0e-07 60.5 183 28.4
TPR.G14415 Trifolium pratense HOM05D000007 ORTHO05D000521 2.0e-07 60.5 160 33.1
Aqoxy3G03706 Aquilegia oxysepala HOM05D015266 ORTHO05D007631 2.6e-07 60.1 153 31.4
arahy.Tifrunner.gnm1.ann1.DMZX0C Arachis hypogaea HOM05D000007 ORTHO05D000017 2.6e-07 60.1 224 26.8
A04p27510 Brassica napus HOM05D001738 ORTHO05D001644 2.6e-07 60.1 174 29.9
COL.COLO4_11925 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.6e-07 60.1 142 28.9
Haze_04558 Corylus avellana HOM05D000007 ORTHO05D000521 2.6e-07 60.1 153 30.1
Peaxi162Scf00188g00102 Petunia axillaris HOM05D005774 ORTHO05D006516 2.6e-07 60.1 87 39.1
Sabra07G0023700 Salix brachista HOM05D002420 ORTHO05D002422 2.6e-07 60.1 191 28.3
Sabra07G0062400 Salix brachista HOM05D000007 ORTHO05D007631 2.6e-07 60.1 137 33.6
DCAR_004837 Daucus carota HOM05D000007 ORTHO05D000039 3.3e-07 59.7 150 30.0
Dinv01180 Davidia involucrata HOM05D000007 ORTHO05D000521 3.3e-07 59.7 162 32.1
Dinv26435 Davidia involucrata HOM05D000007 ORTHO05D000521 3.3e-07 59.7 162 32.1
FAN13G2729 Fragaria x ananassa HOM05D000007 ORTHO05D022567 3.3e-07 59.7 138 33.3
Lj7P411T12 Lonicera japonica HOM05D000007 ORTHO05D000017 3.3e-07 59.7 161 28.0
PSO675G5716 Papaver somniferum HOM05D000007 ORTHO05D000676 3.3e-07 59.7 149 32.9
Prupe.3G111700 Prunus persica HOM05D000007 ORTHO05D000521 3.3e-07 59.7 160 30.6
TPR.G18189 Trifolium pratense HOM05D000007 ORTHO05D000521 3.3e-07 59.7 150 33.3
PSO832G2113 Papaver somniferum HOM05D000007 ORTHO05D000676 4.4e-07 59.3 129 31.0
Psat2g140960 Pisum sativum HOM05D000007 ORTHO05D000521 4.4e-07 59.3 148 32.4
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 4.4e-07 59.3 146 32.2
THA.LOC104818824 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 4.4e-07 59.3 142 31.0
BraA04t18245Z Brassica rapa HOM05D001738 ORTHO05D001644 5.7e-07 58.9 174 29.3
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 5.7e-07 58.9 149 28.2
Thecc.10G169000 Theobroma cacao HOM05D000007 ORTHO05D000039 5.7e-07 58.9 154 30.5
COL.COLO4_11922 Corchorus olitorius HOM05D000007 ORTHO05D000039 7.4e-07 58.5 143 28.0
Haze_06943 Corylus avellana HOM05D000007 ORTHO05D000017 7.4e-07 58.5 150 27.3
Haze_06948 Corylus avellana HOM05D000007 ORTHO05D000017 7.4e-07 58.5 151 27.8
Medtr3g058480 Medicago truncatula HOM05D000007 ORTHO05D000017 7.4e-07 58.5 156 30.8
Oeu025158.1 Olea europaea HOM05D000007 ORTHO05D000039 7.4e-07 58.5 145 31.0
AL3G17110 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 9.7e-07 58.2 144 30.6
Potri.007G074084 Populus trichocarpa HOM05D000007 ORTHO05D007631 9.7e-07 58.2 137 32.8
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 9.7e-07 58.2 155 32.3
Thecc.06G029600 Theobroma cacao HOM05D000007 ORTHO05D000039 9.7e-07 58.2 153 30.7
TPR.G29403 Trifolium pratense HOM05D000007 ORTHO05D000521 9.7e-07 58.2 158 32.3
AT3G17530 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.3e-06 57.8 183 27.9
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 1.3e-06 57.8 155 31.6
HanXRQChr03g0067811 Helianthus annuus HOM05D000664 ORTHO05D000491 1.3e-06 57.8 148 28.4
PSO081G0128 Papaver somniferum HOM05D000007 ORTHO05D000676 1.3e-06 57.8 135 30.4
PSO339G5071 Papaver somniferum HOM05D000007 ORTHO05D000676 1.3e-06 57.8 126 34.1
SalBow3G0037 Salvia bowleyana HOM05D011515 ORTHO05D005165 1.3e-06 57.8 150 28.7
Aa31LG5G16750 Aethionema arabicum HOM05D000007 ORTHO05D000017 1.7e-06 57.4 146 28.1
Prupe.1G167900 Prunus persica HOM05D000007 ORTHO05D000521 1.7e-06 57.4 140 30.0
Thecc.10G168700 Theobroma cacao HOM05D000007 ORTHO05D000039 1.7e-06 57.4 146 30.8
Thecc.10G169200 Theobroma cacao HOM05D000007 ORTHO05D000039 1.7e-06 57.4 146 30.8
Thecc.10G169400 Theobroma cacao HOM05D000007 ORTHO05D000039 1.7e-06 57.4 154 30.5
CARHR080760 Cardamine hirsuta HOM05D000007 ORTHO05D000017 2.2e-06 57.0 163 28.8
Medtr1g094210 Medicago truncatula HOM05D000007 ORTHO05D000017 2.2e-06 57.0 147 34.0
PSO384G4220 Papaver somniferum HOM05D000007 ORTHO05D000039 2.2e-06 57.0 169 26.6
Haze_06941 Corylus avellana HOM05D000007 ORTHO05D000017 2.8e-06 56.6 150 26.7
PSO675G6799 Papaver somniferum HOM05D000007 ORTHO05D000676 2.8e-06 56.6 143 32.9
RcHm_v2.0_Chr3g0455861 Rosa chinensis HOM05D000007 ORTHO05D000039 2.8e-06 56.6 120 33.3
Cfa006260 Carpinus fangiana HOM05D000007 ORTHO05D000521 3.7e-06 56.2 153 28.8
Eucgr.E01420 Eucalyptus grandis HOM05D000007 ORTHO05D003666 3.7e-06 56.2 158 29.1
MD17G1263300 Malus domestica HOM05D000007 ORTHO05D000521 3.7e-06 56.2 138 32.6
PSO675G6896 Papaver somniferum HOM05D000007 ORTHO05D000676 3.7e-06 56.2 156 28.2
PSO832G4171 Papaver somniferum HOM05D000007 ORTHO05D000676 3.7e-06 56.2 130 30.0
Eucgr.G02384 Eucalyptus grandis HOM05D000171 ORTHO05D000101 4.8e-06 55.8 147 32.7
CSS0038812 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 6.3e-06 55.5 147 28.6
COL.COLO4_31026 Corchorus olitorius HOM05D000007 ORTHO05D000521 6.3e-06 55.5 146 28.1
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 6.3e-06 55.5 181 32.0
CSS0050410 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 8.2e-06 55.1 147 27.9
COL.COLO4_37361 Corchorus olitorius HOM05D000664 ORTHO05D000491 8.2e-06 55.1 150 31.3
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 8.2e-06 55.1 151 29.8
Lj2P412T54 Lonicera japonica HOM05D000007 ORTHO05D000521 8.2e-06 55.1 151 30.5
PSO782G2795 Papaver somniferum HOM05D000007 ORTHO05D000676 8.2e-06 55.1 130 32.3
RcHm_v2.0_Chr6g0306731 Rosa chinensis HOM05D000007 ORTHO05D000521 8.2e-06 55.1 144 31.9
SalBow3G2064 Salvia bowleyana HOM05D000412 ORTHO05D000429 8.2e-06 55.1 143 27.3


User provided reference genes

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