Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 1.3e-67 259.6 137 100.0
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 4.2e-13 78.6 51 76.5
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 9.4e-13 77.4 51 74.5
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 9.4e-13 77.4 51 74.5
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.5e-10 70.1 51 62.7
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 2.0e-10 69.7 55 63.6
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 2.6e-10 69.3 51 66.7
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 2.6e-10 69.3 51 62.7
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 5.7e-10 68.2 50 66.0
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 5.7e-10 68.2 51 62.7
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 7.5e-10 67.8 55 61.8
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 9.8e-10 67.4 51 60.8
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 2.2e-09 66.2 51 58.8
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 2.2e-09 66.2 50 62.0
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 2.2e-09 66.2 50 62.0
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 2.8e-09 65.9 51 58.8
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 6.3e-09 64.7 50 60.0
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 6.3e-09 64.7 50 60.0
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 8.3e-09 64.3 50 62.0
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 8.3e-09 64.3 51 54.9
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 1.1e-08 63.9 50 62.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 1.1e-08 63.9 50 62.0
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.1e-08 63.9 50 62.0
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 1.4e-08 63.5 50 62.0
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 1.8e-08 63.2 50 58.0
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 1.8e-08 63.2 50 58.0
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.8e-08 63.2 51 56.9
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 1.8e-08 63.2 50 60.0
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 2.4e-08 62.8 50 60.0
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 2.4e-08 62.8 50 58.0
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.4e-08 62.8 50 60.0
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 2.4e-08 62.8 51 56.9
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 2.4e-08 62.8 50 60.0
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 3.1e-08 62.4 50 56.0
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 4.1e-08 62.0 50 60.0
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 4.1e-08 62.0 50 58.0
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 5.4e-08 61.6 51 58.8
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 5.4e-08 61.6 90 44.4
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 7.0e-08 61.2 50 56.0
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 7.0e-08 61.2 51 54.9
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 7.0e-08 61.2 93 43.0
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 9.1e-08 60.8 50 54.0
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.2e-07 60.5 50 58.0
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.2e-07 60.5 50 58.0
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.2e-07 60.5 50 56.0
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 1.2e-07 60.5 50 56.0
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 1.2e-07 60.5 51 52.9
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 1.6e-07 60.1 50 58.0
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.6e-07 60.1 51 52.9
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.6e-07 60.1 51 52.9
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 1.6e-07 60.1 51 52.9
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.6e-07 60.1 51 52.9
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.6e-07 60.1 51 52.9
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 1.6e-07 60.1 50 56.0
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.6e-07 60.1 67 50.7
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 1.6e-07 60.1 50 58.0
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 1.6e-07 60.1 50 58.0
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 2.0e-07 59.7 50 56.0
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 2.0e-07 59.7 67 50.7
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.0e-07 59.7 67 50.7
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.0e-07 59.7 67 50.7
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.0e-07 59.7 67 50.7
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 2.7e-07 59.3 51 54.9
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 2.7e-07 59.3 51 52.9
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 2.7e-07 59.3 50 56.0
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 3.5e-07 58.9 50 56.0
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 3.5e-07 58.9 50 56.0
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 3.5e-07 58.9 51 52.9
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 3.5e-07 58.9 50 56.0
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 3.5e-07 58.9 50 56.0
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 3.5e-07 58.9 50 56.0
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 3.5e-07 58.9 50 54.0
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 4.5e-07 58.5 50 56.0
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 4.5e-07 58.5 50 52.0
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 4.5e-07 58.5 51 54.9
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 5.9e-07 58.2 50 54.0
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 5.9e-07 58.2 50 52.0
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 5.9e-07 58.2 50 54.0
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 5.9e-07 58.2 50 54.0
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 5.9e-07 58.2 50 50.0
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 5.9e-07 58.2 50 56.0
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 5.9e-07 58.2 51 54.9
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 5.9e-07 58.2 51 54.9
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 7.7e-07 57.8 51 52.9
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 7.7e-07 57.8 51 51.0
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 1.0e-06 57.4 56 46.4
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 1.0e-06 57.4 51 51.0
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.3e-06 57.0 50 54.0
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 1.3e-06 57.0 51 52.9
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 1.3e-06 57.0 50 52.0
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.7e-06 56.6 50 50.0
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.7e-06 56.6 50 48.0
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.7e-06 56.6 50 52.0
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 2.3e-06 56.2 51 51.0
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 2.9e-06 55.8 56 48.2
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 3.8e-06 55.5 50 52.0
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 5.0e-06 55.1 50 52.0
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 5.0e-06 55.1 50 50.0
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 5.0e-06 55.1 50 46.0
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 6.6e-06 54.7 51 51.0


User provided reference genes

Program Settings