Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 6.8e-60 233.8 119 100.0
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 6.6e-47 190.7 119 80.7
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 9.0e-44 180.3 120 76.7
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 1.2e-43 179.9 120 75.0
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 1.5e-43 179.5 120 75.0
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 1.5e-38 162.9 102 77.5
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 6.0e-32 141.0 121 62.0
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 6.7e-31 137.5 120 60.8
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 2.1e-29 132.5 120 63.3
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 2.8e-29 132.1 119 60.5
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 6.2e-29 131.0 120 61.7
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 1.1e-28 130.2 118 58.5
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 3.1e-28 128.6 120 57.5
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 3.1e-28 128.6 119 58.8
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 9.0e-28 127.1 119 56.3
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 1.2e-27 126.7 120 61.7
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 1.5e-27 126.3 120 53.3
Peaxi162Scf17552g00001 Petunia axillaris HOM05D007246 ORTHO05D009066 3.4e-27 125.2 63 100.0
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 8.4e-26 120.6 119 56.3
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 8.4e-26 120.6 119 52.1
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 1.1e-25 120.2 111 55.9
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 1.9e-25 119.4 119 55.5
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 2.5e-25 119.0 120 58.3
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 3.2e-25 118.6 119 50.4
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 3.2e-25 118.6 119 52.9
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 4.2e-25 118.2 120 55.0
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 4.2e-25 118.2 119 54.6
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 7.2e-25 117.5 119 53.8
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 9.3e-25 117.1 119 52.1
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 2.7e-24 115.5 120 55.0
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 3.5e-24 115.2 119 50.4
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 1.8e-23 112.8 121 48.8
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 2.3e-23 112.5 120 50.8
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 2.3e-23 112.5 119 47.1
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 2.3e-23 112.5 121 53.7
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 8.7e-23 110.5 120 51.7
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 1.1e-22 110.2 117 53.0
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 1.9e-22 109.4 123 52.8
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 1.9e-22 109.4 98 58.2
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 2.5e-22 109.0 106 46.2
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 3.3e-22 108.6 102 53.9
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 4.3e-22 108.2 119 51.3
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 4.3e-22 108.2 94 53.2
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 4.3e-22 108.2 119 52.9
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 5.7e-22 107.8 119 51.3
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 7.4e-22 107.5 119 52.1
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 7.4e-22 107.5 95 58.9
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 1.3e-21 106.7 120 50.0
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 1.3e-21 106.7 95 58.9
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 1.3e-21 106.7 96 56.2
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 1.6e-21 106.3 112 50.0
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 2.8e-21 105.5 120 50.0
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 3.7e-21 105.1 102 54.9
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 6.3e-21 104.4 118 44.9
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 6.3e-21 104.4 116 49.1
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 6.3e-21 104.4 112 50.0
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 2.4e-20 102.4 112 46.4
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 4.1e-20 101.7 109 51.4
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 4.1e-20 101.7 120 45.8
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 5.3e-20 101.3 120 47.5
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 5.3e-20 101.3 120 47.5
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 5.3e-20 101.3 118 50.0
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 5.3e-20 101.3 118 50.8
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 5.3e-20 101.3 114 50.0
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 9.0e-20 100.5 118 50.0
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 2.0e-19 99.4 109 50.5
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 2.0e-19 99.4 118 50.8
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 2.0e-19 99.4 118 50.0
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 7.7e-19 97.4 118 50.8
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 7.7e-19 97.4 118 50.8
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 1.0e-18 97.1 92 54.3
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 2.9e-18 95.5 87 55.2
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 3.8e-18 95.1 118 50.0
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 3.8e-18 95.1 118 50.0
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 5.0e-18 94.7 118 50.0
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 1.1e-17 93.6 118 47.5
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 1.1e-17 93.6 97 50.5
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 1.4e-17 93.2 109 46.8
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 1.9e-17 92.8 102 52.9
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 3.2e-17 92.0 102 50.0
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 3.2e-17 92.0 99 52.5
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 9.4e-17 90.5 99 51.5
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 3.6e-16 88.6 116 44.0
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 3.6e-16 88.6 116 44.0
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 6.1e-16 87.8 120 44.2
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 1.4e-15 86.7 112 45.5
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 2.3e-15 85.9 116 43.1
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 3.0e-15 85.5 80 51.2
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 8.8e-15 84.0 119 43.7
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 5.7e-14 81.3 109 45.9
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 9.7e-14 80.5 80 51.2
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.7e-13 79.7 80 51.2
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 2.2e-13 79.3 114 38.6
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 2.2e-13 79.3 95 45.3
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.2e-13 79.3 80 51.2
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.8e-13 79.0 80 50.0
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 1.1e-12 77.0 98 45.9
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 1.5e-11 73.2 75 50.7
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 3.4e-11 72.0 95 44.2
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 1.0e-10 70.5 92 42.4
BcaB07g33731 Brassica carinata HOM05D007246 ORTHO05D009066 2.2e-10 69.3 75 48.0
BcaB07g33733 Brassica carinata HOM05D007246 ORTHO05D009066 2.2e-10 69.3 75 48.0
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 3.8e-10 68.6 108 42.6
SEGI_11751 Sequoiadendron giganteum HOM05D007246 ORTHO05D009066 9.4e-09 63.9 113 36.3
SGA_v2.0_scaffold52G18969 Striga asiatica HOM05D007246 ORTHO05D009066 9.4e-09 63.9 88 45.5
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.1e-06 57.0 63 49.2
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 9.7e-06 53.9 80 37.5


User provided reference genes

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