Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00517g00428 Petunia axillaris HOM05D000347 ORTHO05D008062 6.0e-109 397.5 200 100.0
Sopen06g034940 Solanum pennellii HOM05D000347 ORTHO05D008062 5.0e-47 191.8 241 51.5
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 2.5e-46 189.5 238 50.8
Solyc06g083560.3 Solanum lycopersicum HOM05D000347 ORTHO05D008062 9.5e-46 187.6 242 50.8
Nitab4.5_0002085g0080 Nicotiana tabacum HOM05D000347 ORTHO05D008062 1.6e-37 160.2 217 50.7
Manes.12G042000 Manihot esculenta HOM05D000347 ORTHO05D008062 3.4e-35 152.5 248 42.3
Nitab4.5_0000866g0010 Nicotiana tabacum HOM05D000347 ORTHO05D008062 3.2e-33 146.0 255 42.4
Thecc.01G228300 Theobroma cacao HOM05D000347 ORTHO05D008062 5.4e-33 145.2 244 43.0
GSVIVG01028561001 Vitis vinifera HOM05D000347 ORTHO05D008062 3.5e-32 142.5 252 43.7
Dinv19218 Davidia involucrata HOM05D000347 ORTHO05D008062 1.7e-31 140.2 246 39.8
Solyc09g061715.1 Solanum lycopersicum HOM05D000347 ORTHO05D008062 2.3e-31 139.8 234 41.0
Sopen09g024710 Solanum pennellii HOM05D000347 ORTHO05D008062 2.3e-31 139.8 234 41.0
Hma1.2p1_0351F.1_g132820 Hydrangea macrophylla HOM05D000347 ORTHO05D008062 3.9e-31 139.0 241 41.1
Eucgr.H00807 Eucalyptus grandis HOM05D000347 ORTHO05D008062 5.0e-31 138.7 243 40.3
Cc01_g17250 Coffea canephora HOM05D000347 ORTHO05D008062 1.1e-30 137.5 253 40.3
CiPaw.04G106800 Carya illinoinensis HOM05D000347 ORTHO05D000694 1.5e-30 137.1 231 42.0
Peaxi162Scf02141g00004 Petunia axillaris HOM05D000347 ORTHO05D008062 5.6e-30 135.2 187 46.5
Prupe.8G205000 Prunus persica HOM05D000347 ORTHO05D000694 9.5e-30 134.4 254 39.4
TWI18G0408 Tripterygium wilfordii HOM05D000347 ORTHO05D008062 3.6e-29 132.5 197 44.7
Potri.002G240300 Populus trichocarpa HOM05D000347 ORTHO05D008062 3.1e-28 129.4 246 37.0
Sabra02G0183100 Salix brachista HOM05D000347 ORTHO05D008062 5.2e-28 128.6 206 43.2
CSS0034279 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D008062 2.6e-27 126.3 180 45.6
FAN15G1475 Fragaria x ananassa HOM05D000347 ORTHO05D000694 9.8e-27 124.4 210 41.9
TAR365G0021 Trochodendron aralioides HOM05D000347 ORTHO05D008062 1.3e-26 124.0 208 42.3
PGR083G0949 Punica granatum HOM05D000347 ORTHO05D008062 2.2e-26 123.2 240 40.0
FAN27G2014 Fragaria x ananassa HOM05D000347 ORTHO05D008062 2.9e-26 122.9 210 41.9
Actinidia23733 Actinidia chinensis HOM05D000347 ORTHO05D008062 3.7e-26 122.5 233 39.1
MD05G1178500 Malus domestica HOM05D000347 ORTHO05D008062 3.7e-26 122.5 212 42.0
MSTRG.21431 Avicennia marina HOM05D000347 ORTHO05D008062 4.9e-26 122.1 249 39.0
FAN24G2098 Fragaria x ananassa HOM05D000347 ORTHO05D000694 1.1e-25 120.9 242 38.8
RcHm_v2.0_Chr6g0285151 Rosa chinensis HOM05D000347 ORTHO05D008062 3.2e-25 119.4 211 41.2
TAR365G1261 Trochodendron aralioides HOM05D000347 ORTHO05D008062 3.2e-25 119.4 145 52.4
Migut.D00520 Erythranthe guttata HOM05D000347 ORTHO05D008062 5.4e-25 118.6 221 39.4
FvH4_2g19360 Fragaria vesca HOM05D000347 ORTHO05D008062 5.4e-25 118.6 210 40.5
Oeu018505.1 Olea europaea HOM05D000879 ORTHO05D002043 1.7e-23 113.6 154 47.4
TAR636G2566 Trochodendron aralioides HOM05D000347 ORTHO05D008062 2.3e-23 113.2 226 38.5
Gohir.D11G142500 Gossypium hirsutum HOM05D000347 ORTHO05D008062 3.9e-23 112.5 241 40.2
MD10G1166700 Malus domestica HOM05D000347 ORTHO05D008062 5.0e-23 112.1 207 40.6
QL09p044668 Quercus lobata HOM05D000347 ORTHO05D008062 5.0e-23 112.1 181 44.2
Glyma.08G356200 Glycine max HOM05D000347 ORTHO05D008062 8.6e-23 111.3 214 40.2
Lj1g0023077 Lotus japonicus HOM05D000347 ORTHO05D008062 8.6e-23 111.3 200 41.5
Gohir.A11G136100 Gossypium hirsutum HOM05D000347 ORTHO05D008062 1.9e-22 110.2 243 39.1
Gorai.007G152800 Gossypium raimondii HOM05D000347 ORTHO05D008062 1.9e-22 110.2 243 39.1
SGA_v2.0_scaffold1G00715 Striga asiatica HOM05D000347 ORTHO05D008062 2.5e-22 109.8 242 35.1
Ciclev10021356m.g Citrus clementina HOM05D000347 ORTHO05D008062 4.3e-22 109.0 224 38.8
Lalb_Chr01g0022451 Lupinus albus HOM05D000347 ORTHO05D008062 5.6e-22 108.6 203 40.9
Actinidia37581 Actinidia chinensis HOM05D000347 ORTHO05D008062 2.1e-21 106.7 176 43.8
Phvul.008G123300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 2.8e-21 106.3 208 41.3
PGSC0003DMG400003422 Solanum tuberosum HOM05D000347 ORTHO05D008062 8.1e-21 104.8 173 42.2
Glyma.18G173300 Glycine max HOM05D000347 ORTHO05D008062 3.1e-20 102.8 213 39.4
SalBow4G1846 Salvia bowleyana HOM05D000347 ORTHO05D008062 3.1e-20 102.8 169 41.4
CiPaw.03G151400 Carya illinoinensis HOM05D000347 ORTHO05D008062 5.2e-20 102.1 169 42.0
DCAR_018551 Daucus carota HOM05D000347 ORTHO05D008062 6.8e-20 101.7 218 33.5
Actinidia30090 Actinidia chinensis HOM05D000347 ORTHO05D008062 1.3e-18 97.4 176 43.2
Sed0024241 Sechium edule HOM05D000347 ORTHO05D008062 1.7e-18 97.1 197 39.6
CsaV3_3G028770 Cucumis sativus L. HOM05D000347 ORTHO05D008062 2.2e-18 96.7 198 40.4
VMungo1383G0854 Vigna mungo HOM05D000347 ORTHO05D008062 2.2e-18 96.7 205 38.0
Glyma.16G094000 Glycine max HOM05D000347 ORTHO05D008062 2.9e-18 96.3 182 35.2
Medtr0027s0180 Medicago truncatula HOM05D000347 ORTHO05D008062 6.4e-18 95.1 224 35.7
Rhsim13G0044000 Rhododendron simsii HOM05D000347 ORTHO05D008062 1.9e-17 93.6 167 41.9
Cpa.g.sc8.175 Carica papaya HOM05D000347 ORTHO05D008062 2.4e-17 93.2 213 34.7
HanXRQChr01g0014681 Helianthus annuus HOM05D000347 ORTHO05D008062 3.2e-17 92.8 179 38.0
MELO3C018065.2 Cucumis melo HOM05D000347 ORTHO05D008062 9.2e-17 91.3 175 41.1
Nn1g07779 Nelumbo nucifera HOM05D000347 ORTHO05D008062 9.2e-17 91.3 169 38.5
Lalb_Chr03g0041901 Lupinus albus HOM05D000347 ORTHO05D008062 2.1e-16 90.1 182 36.8
Haze_24776 Corylus avellana HOM05D000347 ORTHO05D008062 2.7e-16 89.7 169 40.2
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 3.5e-16 89.4 201 37.3
Ca_07542_v3 Cicer arietinum L. HOM05D000347 ORTHO05D008062 4.6e-16 89.0 166 37.3
Sed0024927 Sechium edule HOM05D000901 ORTHO05D008062 1.7e-15 87.0 239 33.9
CANSAT01G0926 Cannabis sativa HOM05D000347 ORTHO05D008062 3.0e-15 86.3 232 32.8
Medtr7g059080 Medicago truncatula HOM05D000347 ORTHO05D008062 3.0e-15 86.3 161 39.1
TPR.G15284 Trifolium pratense HOM05D000347 ORTHO05D008062 3.9e-15 85.9 192 35.4
Psat3g142320 Pisum sativum HOM05D000347 ORTHO05D008062 6.6e-15 85.1 200 35.5
AUR62031831 Chenopodium quinoa HOM05D000347 ORTHO05D008062 1.5e-14 84.0 142 40.8
Aqoxy2G03776 Aquilegia oxysepala HOM05D000347 ORTHO05D008062 4.3e-14 82.4 150 44.0
Nitab4.5_0003790g0070 Nicotiana tabacum HOM05D000347 ORTHO05D008062 1.6e-13 80.5 115 45.2
Gorai.004G225100 Gossypium raimondii HOM05D000347 ORTHO05D008062 2.1e-13 80.1 244 32.4
Nitab4.5_0006773g0040 Nicotiana tabacum HOM05D000347 ORTHO05D008062 4.7e-13 79.0 83 49.4
Gohir.A08G194000 Gossypium hirsutum HOM05D000347 ORTHO05D008062 8.1e-13 78.2 244 31.1
Atru.chr5.2056 Acer truncatum HOM05D000347 ORTHO05D008062 4.0e-12 75.9 109 41.3
A07p07520 Brassica napus HOM05D011699 ORTHO05D008062 5.2e-12 75.5 211 31.8
BraA07t28543Z Brassica rapa HOM05D011699 ORTHO05D008062 5.2e-12 75.5 211 31.8
Ah.08g214040 Amaranthus hybridus HOM05D000901 ORTHO05D008062 6.8e-12 75.1 196 35.2
AUR62008877 Chenopodium quinoa HOM05D000347 ORTHO05D008062 6.8e-12 75.1 114 41.2
Nn3g19918 Nelumbo nucifera HOM05D000347 ORTHO05D008062 6.8e-12 75.1 154 38.3
vmacro02746 Vaccinium macrocarpon HOM05D000347 ORTHO05D008062 8.9e-12 74.7 118 50.0
BcaB06g26692 Brassica carinata HOM05D011699 ORTHO05D008062 1.2e-11 74.3 193 32.1
arahy.Tifrunner.gnm1.ann1.W0YDFD Arachis hypogaea HOM05D000347 ORTHO05D008062 2.0e-11 73.6 213 34.7
Lsat_1_v5_gn_5_179760 Lactuca sativa HOM05D000347 ORTHO05D008062 3.4e-11 72.8 187 33.7
arahy.Tifrunner.gnm1.ann1.54FW37 Arachis hypogaea HOM05D000347 ORTHO05D008062 4.4e-11 72.4 215 33.5
BcaC06g35749 Brassica carinata HOM05D011699 ORTHO05D008062 5.8e-11 72.0 193 32.6
BolC7t41607H Brassica oleracea HOM05D011699 ORTHO05D008062 5.8e-11 72.0 193 32.6
C07p11290 Brassica napus HOM05D011699 ORTHO05D008062 7.6e-11 71.6 193 32.6
Sc24g0003600 Simmondsia chinensis HOM05D000347 ORTHO05D008062 1.4e-09 67.4 130 38.5
Sc05g0002410 Simmondsia chinensis HOM05D000347 ORTHO05D008062 5.4e-09 65.5 195 32.3
DCAR_004713 Daucus carota HOM05D000347 ORTHO05D008062 7.1e-09 65.1 150 33.3
Gohir.D08G211800 Gossypium hirsutum HOM05D000347 ORTHO05D008062 7.1e-09 65.1 196 33.2
VMungo0331G1006 Vigna mungo HOM05D000347 ORTHO05D008062 9.2e-09 64.7 182 31.3
Carub.0003s2514 Capsella rubella HOM05D011699 ORTHO05D008062 1.2e-08 64.3 196 32.7
MBI07_g21075_MAGBIO Magnolia biondii HOM05D000347 ORTHO05D008062 1.6e-08 63.9 172 34.9
Lj3g0009150 Lotus japonicus HOM05D000347 ORTHO05D008062 2.7e-08 63.2 147 32.7
Oeu058867.1 Olea europaea HOM05D000347 ORTHO05D008062 2.7e-08 63.2 62 58.1
Sp3g22490 Schrenkiella parvula HOM05D011699 ORTHO05D008062 3.5e-08 62.8 191 27.7
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 4.6e-08 62.4 139 33.8
THA.LOC104821644 Tarenaya hassleriana HOM05D000347 ORTHO05D008062 4.6e-08 62.4 150 32.7
Thhalv10002691m.g Eutrema salsugineum HOM05D011699 ORTHO05D008062 3.9e-07 59.3 162 27.8
AL3G40480 Arabidopsis lyrata HOM05D011699 ORTHO05D008062 2.5e-06 56.6 196 31.6
Phvul.010G019300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 4.3e-06 55.8 192 30.7
Phvul.010G019000 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 5.6e-06 55.5 192 31.2


User provided reference genes

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