Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 1.0e-176 623.2 301 100.0
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 1.9e-154 549.3 301 87.0
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 5.4e-154 547.7 300 86.3
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 7.8e-153 543.9 300 86.0
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 5.4e-146 521.2 301 83.4
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.4e-141 506.5 306 81.4
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.0e-123 447.2 289 72.7
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.9e-123 445.7 289 72.7
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 2.3e-120 436.0 287 71.4
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.3e-120 436.0 288 72.6
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 3.0e-120 435.6 288 73.3
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.9e-120 435.3 288 73.3
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 2.5e-119 432.6 298 68.5
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 3.3e-119 432.2 285 72.3
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 9.7e-119 430.6 288 70.8
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 3.7e-118 428.7 287 72.1
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 8.2e-118 427.6 283 71.7
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 8.2e-118 427.6 289 68.5
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 1.1e-117 427.2 283 70.7
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 1.4e-117 426.8 287 70.7
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 2.4e-117 426.0 287 69.7
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 3.1e-117 425.6 283 70.3
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 1.5e-116 423.3 282 71.6
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 2.6e-116 422.5 288 71.5
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 5.9e-116 421.4 294 68.7
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 7.6e-116 421.0 283 71.4
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 7.6e-116 421.0 283 71.0
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 1.0e-115 420.6 286 68.5
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 1.7e-115 419.9 289 67.8
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 2.9e-115 419.1 297 68.7
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 5.0e-115 418.3 296 68.9
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 8.5e-115 417.5 288 70.1
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.5e-114 416.0 313 66.1
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 4.2e-114 415.2 283 71.0
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 9.3e-114 414.1 287 67.2
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 9.3e-114 414.1 299 66.6
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 1.6e-113 413.3 287 68.3
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 1.4e-112 410.2 286 65.7
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 1.8e-112 409.8 283 66.8
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 3.0e-112 409.1 289 68.2
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 3.0e-112 409.1 300 64.7
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 3.0e-112 409.1 295 64.1
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.9e-112 408.7 283 72.4
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 6.7e-112 407.9 282 69.9
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 8.8e-112 407.5 282 68.4
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 8.8e-112 407.5 289 65.4
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 8.8e-112 407.5 283 67.8
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 1.5e-111 406.8 294 64.3
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 3.3e-111 405.6 283 67.5
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 4.3e-111 405.2 301 64.1
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 9.7e-111 404.1 298 66.4
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 9.7e-111 404.1 291 68.0
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 1.3e-110 403.7 283 67.1
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.7e-110 403.3 283 67.1
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 1.7e-110 403.3 294 65.6
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.2e-110 402.9 300 69.0
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 3.7e-110 402.1 297 64.0
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 6.3e-110 401.4 297 65.7
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.4e-109 400.2 287 67.2
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 5.3e-109 398.3 314 62.1
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 1.2e-108 397.1 318 61.6
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 2.6e-108 396.0 284 65.8
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.3e-107 393.7 282 64.5
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 3.8e-107 392.1 293 61.8
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 5.0e-107 391.7 292 65.1
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.4e-106 390.2 285 64.2
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.4e-106 390.2 284 64.4
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 1.9e-106 389.8 340 58.2
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 2.5e-106 389.4 296 62.2
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 2.5e-106 389.4 288 64.9
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 1.6e-105 386.7 283 64.0
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 4.7e-105 385.2 283 64.0
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 6.7e-104 381.3 294 60.2
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 1.1e-103 380.6 283 62.9
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 1.1e-103 380.6 283 62.9
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 1.5e-103 380.2 283 62.2
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 3.3e-103 379.0 295 63.7
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 7.4e-103 377.9 283 65.0
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.7e-102 376.7 295 61.4
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.8e-102 375.9 288 66.0
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 2.8e-102 375.9 283 63.3
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 1.1e-101 374.0 289 64.7
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 1.8e-101 373.2 294 63.9
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 2.6e-100 369.4 283 60.8
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 2.1e-97 359.8 256 67.6
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 2.1e-97 359.8 290 58.3
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 3.6e-97 359.0 297 62.6
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.9e-96 355.5 301 63.1
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 4.8e-94 348.6 358 49.7
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 9.1e-93 344.4 287 58.5
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 6.5e-91 338.2 286 58.4
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 8.5e-91 337.8 218 72.9
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 4.7e-89 332.0 224 70.5
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 5.7e-87 325.1 283 57.2
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 7.0e-85 318.2 284 52.5
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 2.0e-84 316.6 282 55.0
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 6.5e-83 311.6 278 54.0
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 5.5e-82 308.5 282 54.3
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 1.2e-81 307.4 295 52.2
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 5.7e-79 298.5 218 65.1
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 3.1e-77 292.7 257 56.8
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 3.5e-76 289.3 441 41.5
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 1.7e-67 260.4 292 46.2
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 3.6e-65 252.7 183 64.5
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 2.0e-63 246.9 338 39.6
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 3.3e-58 229.6 186 57.5
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 1.2e-55 221.1 201 56.7
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 2.1e-52 210.3 173 56.1
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 6.6e-51 205.3 163 59.5
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 4.6e-44 182.6 208 50.5
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.6e-41 172.9 143 63.6
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 6.2e-33 145.6 118 59.3
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 1.1e-32 144.8 117 58.1
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 3.5e-28 129.8 435 24.4
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 6.0e-28 129.0 296 28.0
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 1.0e-19 101.7 71 71.8
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 6.2e-17 92.4 71 66.2
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 3.1e-16 90.1 67 58.2
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.3e-14 84.7 53 81.1
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 2.0e-07 60.8 53 60.4


User provided reference genes

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