Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 7.1e-57 223.8 119 100.0
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 2.3e-39 165.6 122 71.3
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 2.8e-37 158.7 122 67.2
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 3.1e-36 155.2 119 74.8
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 1.7e-34 149.4 119 65.5
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 2.2e-34 149.1 123 64.2
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.8e-28 129.4 121 57.9
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 1.8e-28 129.4 124 63.7
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 3.1e-28 128.6 121 55.4
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 5.3e-28 127.9 124 62.9
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 2.0e-27 125.9 119 58.0
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 3.4e-27 125.2 97 64.9
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 3.4e-27 125.2 80 71.2
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 4.5e-27 124.8 128 53.9
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 5.8e-27 124.4 123 65.0
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 7.6e-27 124.0 120 55.0
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 1.0e-26 123.6 119 58.8
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 1.3e-26 123.2 113 57.5
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 3.8e-26 121.7 84 66.7
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 5.0e-26 121.3 104 62.5
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 6.5e-26 120.9 119 51.3
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 8.4e-26 120.6 112 58.0
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 1.1e-25 120.2 112 57.1
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.1e-25 120.2 84 65.5
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 1.1e-25 120.2 77 71.4
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 1.1e-25 120.2 122 54.1
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 1.1e-25 120.2 82 65.9
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 1.4e-25 119.8 84 67.9
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.9e-25 119.4 118 51.7
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 1.9e-25 119.4 85 64.7
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 3.2e-25 118.6 84 66.7
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 5.5e-25 117.9 76 69.7
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 7.2e-25 117.5 80 66.2
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 9.3e-25 117.1 84 64.3
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 9.3e-25 117.1 111 54.1
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 1.2e-24 116.7 77 71.4
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 1.2e-24 116.7 81 74.1
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 1.6e-24 116.3 84 65.5
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 1.6e-24 116.3 123 54.5
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 2.1e-24 115.9 112 56.2
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 2.1e-24 115.9 123 49.6
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 2.7e-24 115.5 119 57.1
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 4.6e-24 114.8 126 49.2
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 1.0e-23 113.6 103 57.3
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.0e-23 113.6 109 54.1
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.0e-23 113.6 90 63.3
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.3e-23 113.2 128 49.2
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 3.0e-23 112.1 76 81.6
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 3.9e-23 111.7 109 53.2
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 3.9e-23 111.7 109 53.2
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 5.1e-23 111.3 121 62.8
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 1.1e-22 110.2 110 52.7
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 3.3e-22 108.6 113 62.8
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 7.4e-22 107.5 91 58.2
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 9.7e-22 107.1 62 75.8
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 9.7e-22 107.1 62 75.8
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 1.3e-21 106.7 111 60.4
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 6.3e-21 104.4 115 47.8
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 1.1e-20 103.6 120 55.0
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 2.4e-20 102.4 61 72.1
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 2.4e-20 102.4 61 72.1
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 2.4e-20 102.4 117 51.3
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 3.1e-20 102.1 94 69.1
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 2.0e-19 99.4 76 61.8
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 4.5e-19 98.2 62 82.3
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 1.3e-18 96.7 90 57.8
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 1.7e-18 96.3 119 57.1
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 5.0e-18 94.7 52 80.8
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 1.1e-17 93.6 118 56.8
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 4.2e-17 91.7 94 62.8
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 5.5e-17 91.3 129 44.2
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 9.4e-17 90.5 93 59.1
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 1.0e-15 87.0 120 54.2
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 5.1e-15 84.7 52 71.2
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.1e-14 83.6 101 48.5
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 3.3e-14 82.0 119 44.5
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 5.7e-14 81.3 48 77.1
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.7e-13 79.7 48 75.0
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 1.5e-11 73.2 83 48.2
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.0e-10 70.5 45 71.1
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 5.0e-10 68.2 46 69.6


User provided reference genes

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