Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00360g00029 Petunia axillaris HOM05D003947 ORTHO05D004614 5.9e-115 417.5 210 100.0
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 9.1e-108 393.7 210 93.3
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 1.7e-106 389.4 210 92.9
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 1.6e-99 366.3 210 88.6
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 2.0e-99 365.9 210 88.6
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 1.3e-98 363.2 210 87.6
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 1.3e-77 293.5 210 72.9
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 1.7e-77 293.1 210 71.9
Actinidia29546 Actinidia chinensis HOM05D003947 ORTHO05D004614 1.2e-75 287.0 210 69.0
Hma1.2p1_0358F.1_g134715 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 4.6e-75 285.0 212 69.3
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 3.9e-74 282.0 210 72.4
CSS0022992 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 1.9e-73 279.6 210 68.1
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 9.5e-73 277.3 210 70.5
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 4.7e-72 275.0 210 68.6
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 2.6e-70 269.2 210 66.7
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 5.8e-70 268.1 210 67.1
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 5.8e-70 268.1 210 67.6
MD10G1033900 Malus domestica HOM05D003947 ORTHO05D004614 1.7e-69 266.5 210 65.2
Manes.02G182900 Manihot esculenta HOM05D003947 ORTHO05D004614 8.3e-69 264.2 210 65.7
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 2.4e-68 262.7 210 64.8
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 3.5e-67 258.8 210 66.2
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 4.6e-67 258.5 210 66.2
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 4.6e-67 258.5 210 64.8
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 6.0e-67 258.1 210 64.8
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.7e-66 256.5 209 64.1
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 1.7e-66 256.5 210 64.8
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 3.0e-66 255.8 214 65.4
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 1.1e-65 253.8 214 65.0
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 1.1e-65 253.8 211 64.5
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 1.1e-65 253.8 210 61.9
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 1.5e-65 253.4 210 63.8
Gorai.005G077400 Gossypium raimondii HOM05D003947 ORTHO05D004614 1.5e-65 253.4 214 65.0
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 1.9e-65 253.1 210 64.8
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 4.3e-65 251.9 211 64.5
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 4.3e-65 251.9 209 62.2
Gohir.D02G068500 Gossypium hirsutum HOM05D003947 ORTHO05D004614 4.3e-65 251.9 214 64.5
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.8e-64 249.2 210 62.4
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 4.7e-64 248.4 210 62.9
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 1.1e-63 247.3 211 62.1
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 2.4e-63 246.1 212 63.2
MSTRG.24219 Avicennia marina HOM05D003947 ORTHO05D004614 6.8e-63 244.6 217 62.2
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 6.8e-63 244.6 210 62.9
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 6.8e-63 244.6 211 63.5
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 8.9e-63 244.2 211 61.6
Haze_17801 Corylus avellana HOM05D003947 ORTHO05D004614 1.2e-62 243.8 186 68.8
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.5e-62 243.4 205 62.9
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 1.5e-62 243.4 210 62.4
PGR044G0664 Punica granatum HOM05D003947 ORTHO05D004614 1.5e-62 243.4 211 62.6
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 1.5e-62 243.4 210 62.4
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 3.4e-62 242.3 212 62.7
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 3.4e-62 242.3 213 62.9
Rhsim11G0087300 Rhododendron simsii HOM05D003947 ORTHO05D004614 3.4e-62 242.3 210 61.9
MSTRG.25300 Avicennia marina HOM05D003947 ORTHO05D004614 5.8e-62 241.5 225 61.3
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 7.6e-62 241.1 213 62.4
MSTRG.1106 Avicennia marina HOM05D003947 ORTHO05D004614 9.9e-62 240.7 218 63.8
Ciclev10002453m.g Citrus clementina HOM05D003947 ORTHO05D004614 1.7e-61 240.0 216 64.4
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 2.2e-61 239.6 210 62.9
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 2.9e-61 239.2 211 61.6
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 3.8e-61 238.8 214 61.2
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 6.4e-61 238.0 211 61.1
QL02p038162 Quercus lobata HOM05D003947 ORTHO05D004614 6.4e-61 238.0 186 66.1
vmacro21121 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 8.4e-61 237.7 187 67.9
Sc02g0003850 Simmondsia chinensis HOM05D003947 ORTHO05D004614 2.4e-60 236.1 210 59.5
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 4.2e-60 235.3 211 60.7
arahy.Tifrunner.gnm1.ann1.8MR9WY Arachis hypogaea HOM05D003947 ORTHO05D004614 9.3e-60 234.2 211 61.1
Hund17479 Selenicereus undatus HOM05D003947 ORTHO05D004614 9.3e-60 234.2 203 63.1
arahy.Tifrunner.gnm1.ann1.H1TMWI Arachis hypogaea HOM05D003947 ORTHO05D004614 4.6e-59 231.9 210 61.4
Actinidia04751 Actinidia chinensis HOM05D003947 ORTHO05D004614 1.0e-58 230.7 210 62.4
TAR625G1169 Trochodendron aralioides HOM05D003947 ORTHO05D004614 1.0e-58 230.7 186 66.1
Lj7P382T65 Lonicera japonica HOM05D003947 ORTHO05D004614 1.3e-58 230.3 187 65.2
AUR62034897 Chenopodium quinoa HOM05D003947 ORTHO05D004614 3.0e-58 229.2 189 62.4
COL.COLO4_03360 Corchorus olitorius HOM05D003947 ORTHO05D004614 3.0e-58 229.2 186 67.2
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 5.1e-58 228.4 213 58.7
ClCG08G003050 Citrullus lanatus HOM05D003947 ORTHO05D004614 6.6e-58 228.0 201 61.2
Medtr1g098260 Medicago truncatula HOM05D003947 ORTHO05D004614 6.6e-58 228.0 232 55.2
TAR381G1088 Trochodendron aralioides HOM05D003947 ORTHO05D004614 6.6e-58 228.0 186 65.1
arahy.Tifrunner.gnm1.ann1.2W58SS Arachis hypogaea HOM05D003947 ORTHO05D004614 8.7e-58 227.6 210 61.0
SalBow6G2315 Salvia bowleyana HOM05D003947 ORTHO05D004614 1.1e-57 227.3 195 66.7
TAR376G1220 Trochodendron aralioides HOM05D003947 ORTHO05D004614 2.8e-56 222.6 210 58.6
Oeu051281.1 Olea europaea HOM05D003947 ORTHO05D004614 3.6e-56 222.2 189 61.4
SalBow7G0665 Salvia bowleyana HOM05D003947 ORTHO05D004614 4.8e-56 221.9 188 65.4
Migut.C00963 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.4e-55 220.3 225 58.7
TAR628G1588 Trochodendron aralioides HOM05D003947 ORTHO05D004614 1.4e-55 220.3 185 63.2
Oeu002064.1 Olea europaea HOM05D003947 ORTHO05D004614 1.8e-55 219.9 189 63.5
Migut.N03200 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.5e-54 216.9 224 57.1
Oeu017623.1 Olea europaea HOM05D003947 ORTHO05D004614 1.5e-54 216.9 189 60.8
DCAR_001161 Daucus carota HOM05D003947 ORTHO05D004614 2.0e-54 216.5 194 61.3
Glyma.16G163700 Glycine max HOM05D003947 ORTHO05D004614 2.0e-54 216.5 211 57.8
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 1.3e-53 213.8 212 58.0
vmacro01489 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 1.7e-53 213.4 185 62.7
Cpa.g.sc26.88 Carica papaya HOM05D003947 ORTHO05D004614 2.9e-53 212.6 187 62.0
Dinv25896 Davidia involucrata HOM05D003947 ORTHO05D004614 2.9e-53 212.6 216 57.4
Sed0016828 Sechium edule HOM05D003947 ORTHO05D004614 1.9e-52 209.9 187 59.9
Ah.05g168170 Amaranthus hybridus HOM05D003947 ORTHO05D004614 2.4e-52 209.5 187 61.5
Duzib041G0104 Durio zibethinus HOM05D003947 ORTHO05D004614 1.6e-51 206.8 186 61.3
Oeu022056.3 Olea europaea HOM05D003947 ORTHO05D004614 2.7e-51 206.1 191 60.2
PSO675G7401 Papaver somniferum HOM05D003947 ORTHO05D004614 1.0e-50 204.1 210 58.1
arahy.Tifrunner.gnm1.ann1.P1AQDG Arachis hypogaea HOM05D003947 ORTHO05D004614 2.3e-50 203.0 188 60.1
PSO541G4258 Papaver somniferum HOM05D003947 ORTHO05D004614 2.3e-50 203.0 210 56.7
CSS0014660 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 5.1e-50 201.8 210 52.9
MBI04_g08942_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 5.1e-50 201.8 249 49.8
THA.LOC104806764 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.5e-49 200.3 211 52.1
SGA_v2.0_scaffold108G30867 Striga asiatica HOM05D003947 ORTHO05D004614 5.6e-49 198.4 216 56.5
Aqoxy6G00408 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 7.3e-49 198.0 186 58.1
Glyma.02G079300 Glycine max HOM05D003947 ORTHO05D004614 2.1e-48 196.4 210 55.2
HanXRQChr05g0162361 Helianthus annuus HOM05D003947 ORTHO05D004614 3.6e-48 195.7 217 53.9
HanXRQChr10g0278611 Helianthus annuus HOM05D003947 ORTHO05D004614 4.0e-47 192.2 218 54.1
Hund26679 Selenicereus undatus HOM05D003947 ORTHO05D004614 6.9e-47 191.4 185 56.8
Aa31LG7G6750 Aethionema arabicum HOM05D003947 ORTHO05D004614 5.8e-46 188.3 213 52.1
HPP92_002802 Vanilla planifolia HOM05D003947 ORTHO05D004614 5.8e-46 188.3 210 53.3
Carub.0001s2230 Capsella rubella HOM05D003947 ORTHO05D004614 2.2e-45 186.4 218 52.8
THA.LOC104813088 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 2.2e-45 186.4 211 51.2
Lj4P703T37 Lonicera japonica HOM05D003947 ORTHO05D004614 4.9e-45 185.3 190 59.5
AL1G36340 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 8.4e-45 184.5 217 52.1
THA.LOC104810422 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 8.4e-45 184.5 211 51.2
Aa31LG6G8230 Aethionema arabicum HOM05D003947 ORTHO05D004614 1.4e-44 183.7 210 50.5
Lalb_Chr19g0130101 Lupinus albus HOM05D003947 ORTHO05D004614 4.2e-44 182.2 210 53.3
Rhsim06G0091600 Rhododendron simsii HOM05D003947 ORTHO05D004614 9.3e-44 181.0 205 59.5
AT1G22790 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 2.1e-43 179.9 218 51.8
SGA_v2.0_scaffold195G40776 Striga asiatica HOM05D003947 ORTHO05D004614 2.7e-43 179.5 198 55.6
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 7.9e-43 177.9 201 52.2
Sp1g29270 Schrenkiella parvula HOM05D003947 ORTHO05D004614 7.9e-43 177.9 210 48.1
Aa31LG4G8980 Aethionema arabicum HOM05D003947 ORTHO05D004614 1.8e-42 176.8 210 49.0
Os01g0589700 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 6.7e-42 174.9 212 49.5
Manes.16G051400 Manihot esculenta HOM05D003947 ORTHO05D004614 1.9e-41 173.3 152 59.9
Nn1g06005 Nelumbo nucifera HOM05D003947 ORTHO05D004614 1.9e-41 173.3 216 51.4
CARHR033390 Cardamine hirsuta HOM05D003947 ORTHO05D004614 4.3e-41 172.2 214 47.7
AL1G48450 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 7.4e-41 171.4 212 47.2
CARHR023150 Cardamine hirsuta HOM05D003947 ORTHO05D004614 7.4e-41 171.4 227 49.3
Carub.0001s3209 Capsella rubella HOM05D003947 ORTHO05D004614 9.6e-41 171.0 213 47.4
Thhalv10008850m.g Eutrema salsugineum HOM05D003947 ORTHO05D004614 2.8e-40 169.5 212 49.5
TPR.G17018 Trifolium pratense HOM05D003947 ORTHO05D004614 3.7e-40 169.1 173 53.2
Lsat_1_v5_gn_1_5261 Lactuca sativa HOM05D003947 ORTHO05D004614 4.8e-40 168.7 223 45.3
BcaB07g33023 Brassica carinata HOM05D030501 ORTHO05D004614 3.4e-38 162.5 212 46.7
Zm00001eb160770 Zea mays HOM05D003947 ORTHO05D004614 3.4e-38 162.5 217 48.8
BcaC05g27781 Brassica carinata HOM05D003947 ORTHO05D004614 1.0e-37 161.0 210 48.1
Lj2g0016258 Lotus japonicus HOM05D003947 ORTHO05D004614 1.0e-37 161.0 210 51.0
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 1.3e-37 160.6 212 45.3
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 1.3e-37 160.6 212 45.3
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 1.3e-37 160.6 212 45.3
AT1G34010 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 1.7e-37 160.2 211 46.9
Actinidia26828 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.9e-37 159.5 176 55.1
BolC5t32518H Brassica oleracea HOM05D003947 ORTHO05D004614 3.8e-37 159.1 210 47.6
unitig_32.g11256 Utricularia gibba HOM05D003947 ORTHO05D004614 3.8e-37 159.1 230 47.0
VMungo0464G0903 Vigna mungo HOM05D003947 ORTHO05D004614 1.1e-36 157.5 186 52.2
PGR042G2534 Punica granatum HOM05D003947 ORTHO05D004614 1.2e-35 154.1 211 46.4
A09p32460 Brassica napus HOM05D003947 ORTHO05D004614 1.6e-35 153.7 212 43.9
A05p24080 Brassica napus HOM05D003947 ORTHO05D004614 5.1e-34 148.7 210 46.7
CsaV3_6G005040 Cucumis sativus L. HOM05D003947 ORTHO05D004614 5.7e-33 145.2 214 46.3
MELO3C008326.2 Cucumis melo HOM05D003947 ORTHO05D004614 9.6e-33 144.4 214 46.3
C05p37750 Brassica napus HOM05D003947 ORTHO05D004614 2.4e-31 139.8 186 48.4
BraA09t39684Z Brassica rapa HOM05D003947 ORTHO05D004614 4.1e-31 139.0 225 44.0
SalBow7G0026 Salvia bowleyana HOM05D003947 ORTHO05D004614 4.1e-31 139.0 96 76.0
ClCG08G007400 Citrullus lanatus HOM05D003947 ORTHO05D004614 5.3e-31 138.7 214 44.4
Zm00001eb357510 Zea mays HOM05D003947 ORTHO05D004614 5.3e-31 138.7 185 47.0
Phvul.004G091200 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 1.2e-30 137.5 181 47.5
BraA09t38788Z Brassica rapa HOM05D003947 ORTHO05D004614 4.5e-30 135.6 186 44.1
Lsat_1_v5_gn_6_101640 Lactuca sativa HOM05D003947 ORTHO05D004614 2.9e-29 132.9 219 41.6
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 8.4e-29 131.3 226 44.2
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 1.9e-28 130.2 186 47.3
BcaNung06442 Brassica carinata HOM05D003947 ORTHO05D004614 2.7e-27 126.3 234 41.5
Lsat_1_v5_gn_9_42121 Lactuca sativa HOM05D003947 ORTHO05D004614 6.7e-26 121.7 207 44.9
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 2.2e-24 116.7 217 41.9
SHI09085 Sapria himalayana HOM05D003947 ORTHO05D004614 1.1e-23 114.4 189 44.4
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 4.1e-23 112.5 218 41.7
A09p41960 Brassica napus HOM05D003947 ORTHO05D004614 2.0e-22 110.2 215 38.6
BcaNung06106 Brassica carinata HOM05D003947 ORTHO05D004614 2.6e-22 109.8 179 45.3
C05p21890 Brassica napus HOM05D003947 ORTHO05D004614 1.1e-20 104.4 173 45.1
BolC5t30884H Brassica oleracea HOM05D003947 ORTHO05D004614 1.1e-20 104.4 233 39.1
Sed0006124 Sechium edule HOM05D003947 ORTHO05D004614 2.5e-17 93.2 167 40.1
Os05g0591450 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 1.7e-16 90.5 91 57.1
Sed0022469 Sechium edule HOM05D003947 ORTHO05D004614 5.9e-14 82.0 178 38.2
Aqoxy5G02026 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 1.1e-09 67.8 198 33.3
HPP92_002804 Vanilla planifolia HOM05D003947 ORTHO05D004614 4.4e-09 65.9 137 38.7
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 1.1e-07 61.2 153 34.0
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 1.8e-07 60.5 152 34.2
Lsat_1_v5_gn_6_55560 Lactuca sativa HOM05D007392 ORTHO05D009181 1.5e-06 57.4 146 30.8
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 2.6e-06 56.6 151 32.5
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 2.6e-06 56.6 152 30.3
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 2.6e-06 56.6 148 33.8
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 3.5e-06 56.2 151 31.1
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 3.5e-06 56.2 159 30.2
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 4.5e-06 55.8 152 30.9
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 7.7e-06 55.1 144 31.9


User provided reference genes

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