Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00311g01314 Petunia axillaris HOM05D004402 ORTHO05D005314 2.6e-297 1024.6 512 100.0
Sopen10g033410 Solanum pennellii HOM05D004402 ORTHO05D005314 2.2e-272 941.8 510 90.4
CAN.G488.15 Capsicum annuum HOM05D004402 ORTHO05D005314 7.1e-263 910.2 510 87.1
Solyc10g083960.2 Solanum lycopersicum HOM05D004402 ORTHO05D005314 1.8e-258 895.6 510 86.9
Nitab4.5_0000578g0080 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.7e-254 881.7 511 84.9
Sopen09g003130 Solanum pennellii HOM05D004402 ORTHO05D005314 4.2e-247 857.8 511 83.2
Solyc09g008310.3 Solanum lycopersicum HOM05D004402 ORTHO05D005314 3.5e-246 854.7 511 82.8
Dinv35795 Davidia involucrata HOM05D004402 ORTHO05D005314 7.1e-239 830.5 511 79.6
Nitab4.5_0000063g0160 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.3e-237 825.5 510 82.2
Cc06_g04350 Coffea canephora HOM05D004402 ORTHO05D005314 6.7e-237 823.9 511 79.6
Nitab4.5_0000814g0100 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.8e-234 815.8 510 81.4
CSS0044786 Camellia sinensis var. sinensis HOM05D004402 ORTHO05D005314 1.0e-232 810.1 511 77.5
MSTRG.10328 Avicennia marina HOM05D004402 ORTHO05D005314 3.3e-228 795.0 511 78.3
Peaxi162Scf00722g00015 Petunia axillaris HOM05D004402 ORTHO05D005314 1.3e-227 793.1 511 78.5
QL07p043056 Quercus lobata HOM05D004402 ORTHO05D005314 5.9e-225 784.3 510 74.7
GSVIVG01033653001 Vitis vinifera HOM05D004402 ORTHO05D005314 5.9e-225 784.3 512 75.8
Oeu041487.1 Olea europaea HOM05D004402 ORTHO05D005314 7.6e-225 783.9 511 76.7
Nn6g35264 Nelumbo nucifera HOM05D004402 ORTHO05D005314 8.4e-224 780.4 511 75.9
COL.COLO4_09330 Corchorus olitorius HOM05D004402 ORTHO05D005314 7.9e-222 773.9 510 75.9
FvH4_6g16530 Fragaria vesca HOM05D004402 ORTHO05D005314 8.7e-221 770.4 510 74.1
Nitab4.5_0010955g0010 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.5e-220 769.6 525 75.4
Cfa017631 Carpinus fangiana HOM05D004402 ORTHO05D005314 5.7e-220 767.7 510 74.1
RcHm_v2.0_Chr3g0470441 Rosa chinensis HOM05D004402 ORTHO05D005314 1.3e-219 766.5 510 73.9
TAR633G1938 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.3e-219 766.5 511 75.0
Migut.L01711 Erythranthe guttata HOM05D004402 ORTHO05D005314 4.8e-219 764.6 510 74.7
Prupe.7G128300 Prunus persica HOM05D004402 ORTHO05D005314 1.1e-218 763.5 511 74.8
Thecc.05G068900 Theobroma cacao HOM05D004402 ORTHO05D005314 1.8e-218 762.7 510 74.3
Lj2C120T4 Lonicera japonica HOM05D004402 ORTHO05D005314 3.1e-218 761.9 504 77.8
Duzib093G2129 Durio zibethinus HOM05D004402 ORTHO05D005314 6.9e-218 760.8 510 74.5
vmacro01673 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 6.9e-218 760.8 545 69.9
Atru.chr8.1786 Acer truncatum HOM05D004402 ORTHO05D005314 1.0e-216 756.9 510 73.1
Ciclev10011527m.g Citrus clementina HOM05D004402 ORTHO05D005314 5.0e-216 754.6 510 73.5
Lj1g0000599 Lotus japonicus HOM05D004402 ORTHO05D005314 5.0e-216 754.6 511 73.2
TAR636G0918 Trochodendron aralioides HOM05D004402 ORTHO05D005314 5.0e-216 754.6 489 76.3
SalBow2G1223 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.1e-215 753.4 506 74.1
SalBow3G3127 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.9e-215 752.7 506 74.3
Glyma.19G184800 Glycine max HOM05D004402 ORTHO05D005314 3.2e-215 751.9 511 73.0
Glyma.03G184200 Glycine max HOM05D004402 ORTHO05D005314 9.4e-215 750.4 511 72.2
Phvul.001G179700 Phaseolus vulgaris HOM05D004402 ORTHO05D005314 2.1e-214 749.2 511 72.6
Lalb_Chr25g0288951 Lupinus albus HOM05D004402 ORTHO05D005314 3.6e-214 748.4 511 72.8
Potri.006G123000 Populus trichocarpa HOM05D004402 ORTHO05D005314 3.6e-214 748.4 509 74.1
CiPaw.10G128900 Carya illinoinensis HOM05D004402 ORTHO05D005314 7.9e-214 747.3 510 73.5
Gorai.009G414300 Gossypium raimondii HOM05D004402 ORTHO05D005314 7.9e-214 747.3 510 72.7
CsaV3_3G036050 Cucumis sativus L. HOM05D004402 ORTHO05D005314 1.4e-213 746.5 510 71.6
Sabra06G0097300 Salix brachista HOM05D004402 ORTHO05D005314 1.4e-213 746.5 510 73.1
DCAR_017670 Daucus carota HOM05D004402 ORTHO05D005314 1.8e-213 746.1 508 72.6
TWI74G0242 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 5.1e-213 744.6 513 73.5
Lalb_Chr20g0112571 Lupinus albus HOM05D004402 ORTHO05D005314 6.7e-213 744.2 510 72.5
Gohir.D04G110200 Gossypium hirsutum HOM05D004402 ORTHO05D005314 2.5e-212 742.3 510 72.4
ClCG10G020050 Citrullus lanatus HOM05D004402 ORTHO05D005314 5.7e-212 741.1 510 71.2
Sc20g0005590 Simmondsia chinensis HOM05D004402 ORTHO05D005314 4.8e-211 738.0 511 69.5
CANSAT80G1177 Cannabis sativa HOM05D004402 ORTHO05D005314 6.3e-211 737.6 510 71.6
DCAR_015004 Daucus carota HOM05D004402 ORTHO05D005314 8.2e-211 737.3 519 71.9
THA.LOC104823232 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 1.5e-209 733.0 510 72.0
PSO801G0054 Papaver somniferum HOM05D004402 ORTHO05D005314 2.0e-209 732.6 511 70.6
Ca_08910_v3 Cicer arietinum L. HOM05D004402 ORTHO05D005314 3.4e-209 731.9 510 72.0
Dinv37323 Davidia involucrata HOM05D004402 ORTHO05D005314 4.5e-209 731.5 452 80.3
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 6.5e-208 727.6 512 71.7
MBI17_g34762_MAGBIO Magnolia biondii HOM05D004402 ORTHO05D005314 6.5e-208 727.6 525 69.3
PSO339G5499 Papaver somniferum HOM05D004402 ORTHO05D005314 6.5e-208 727.6 512 70.5
BcaB01g05839 Brassica carinata HOM05D004402 ORTHO05D005314 5.5e-207 724.5 510 71.8
Medtr7g102180 Medicago truncatula HOM05D004402 ORTHO05D005314 1.2e-206 723.4 511 70.6
Nn2g13812 Nelumbo nucifera HOM05D004402 ORTHO05D005314 1.2e-206 723.4 512 71.5
AL6G12780 Arabidopsis lyrata HOM05D004402 ORTHO05D005314 1.6e-206 723.0 510 71.2
BcaB01g05821 Brassica carinata HOM05D004402 ORTHO05D005314 1.6e-206 723.0 510 71.2
COL.COLO4_26944 Corchorus olitorius HOM05D004402 ORTHO05D005314 2.7e-206 722.2 478 75.1
Carub.0006s0224 Capsella rubella HOM05D004402 ORTHO05D005314 3.6e-206 721.8 510 71.0
vmacro07301 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 3.6e-206 721.8 598 63.0
BolC3t12705H Brassica oleracea HOM05D004402 ORTHO05D005314 4.7e-206 721.5 510 71.6
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea HOM05D004402 ORTHO05D005314 1.4e-205 719.9 549 67.2
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea HOM05D004402 ORTHO05D005314 1.4e-205 719.9 549 67.0
Thhalv10013303m.g Eutrema salsugineum HOM05D004402 ORTHO05D005314 1.4e-205 719.9 518 70.3
C03p01510 Brassica napus HOM05D004402 ORTHO05D005314 3.9e-205 718.4 510 71.4
FAN14G0478 Fragaria x ananassa HOM05D004402 ORTHO05D005314 5.1e-205 718.0 510 70.6
Manes.12G084800 Manihot esculenta HOM05D004402 ORTHO05D005314 5.1e-205 718.0 511 70.8
Sed0020729 Sechium edule HOM05D004402 ORTHO05D005314 6.7e-205 717.6 510 69.4
A03p01170 Brassica napus HOM05D004402 ORTHO05D005314 8.8e-205 717.2 510 71.0
TWI77G0706 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 8.8e-205 717.2 512 70.7
BraA10t45293Z Brassica rapa HOM05D004402 ORTHO05D005314 4.4e-204 714.9 510 70.8
FAN09G4748 Fragaria x ananassa HOM05D004402 ORTHO05D005314 7.4e-204 714.1 510 70.2
AT5G03430 Arabidopsis thaliana HOM05D004402 ORTHO05D005314 9.7e-204 713.8 510 70.4
A10p32580 Brassica napus HOM05D004402 ORTHO05D005314 9.7e-204 713.8 510 70.6
BolC2t06097H Brassica oleracea HOM05D004402 ORTHO05D005314 9.7e-204 713.8 511 70.5
CARHR209910 Cardamine hirsuta HOM05D004402 ORTHO05D005314 1.3e-203 713.4 510 70.0
BcaC06g32061 Brassica carinata HOM05D004402 ORTHO05D005314 1.7e-203 713.0 511 70.6
BolC9t60074H Brassica oleracea HOM05D004402 ORTHO05D005314 1.7e-203 713.0 511 70.6
Sp6g39310 Schrenkiella parvula HOM05D004402 ORTHO05D005314 3.7e-203 711.8 510 71.2
BcaC06g32058 Brassica carinata HOM05D004402 ORTHO05D005314 6.3e-203 711.1 510 70.2
PGR004G2373 Punica granatum HOM05D004402 ORTHO05D005314 6.3e-203 711.1 511 70.8
THA.LOC104826918 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 6.3e-203 711.1 511 70.3
C09p73380 Brassica napus HOM05D004402 ORTHO05D005314 1.4e-202 709.9 511 70.5
BraA02t04760Z Brassica rapa HOM05D004402 ORTHO05D005314 1.4e-202 709.9 513 70.2
HanXRQChr14g0454821 Helianthus annuus HOM05D004402 ORTHO05D005314 1.4e-202 709.9 507 70.0
C02p01070 Brassica napus HOM05D004402 ORTHO05D005314 1.8e-202 709.5 511 70.1
MD12G1109700 Malus domestica HOM05D004402 ORTHO05D005314 5.0e-200 701.4 477 72.5
AUR62026916 Chenopodium quinoa HOM05D004402 ORTHO05D005314 1.1e-199 700.3 511 67.9
Eucgr.K02925 Eucalyptus grandis HOM05D004402 ORTHO05D005314 1.1e-199 700.3 510 69.8
ATR0910G004 Amborella trichopoda HOM05D004402 ORTHO05D005314 1.5e-199 699.9 513 68.0
Oeu005028.1 Olea europaea HOM05D004402 ORTHO05D005314 1.9e-199 699.5 523 69.6
MD04G1091700 Malus domestica HOM05D004402 ORTHO05D005314 4.2e-199 698.4 477 71.9
BraA03t09499Z Brassica rapa HOM05D004402 ORTHO05D005314 9.4e-199 697.2 497 71.2
CAN.G900.21 Capsicum annuum HOM05D004402 ORTHO05D005314 1.6e-198 696.4 401 84.0
CDE10G0806 Ceratophyllum demersum HOM05D004402 ORTHO05D005314 4.7e-198 694.9 511 67.9
Rhsim03G0090600 Rhododendron simsii HOM05D004402 ORTHO05D005314 4.0e-197 691.8 564 64.4
MELO3C009365.2 Cucumis melo HOM05D004402 ORTHO05D005314 5.7e-196 688.0 509 68.0
ECA238G0572 Erigeron canadensis HOM05D004402 ORTHO05D005314 8.2e-195 684.1 506 67.6
FAN05G1679 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.4e-194 682.6 510 68.2
FAN05G2520 Fragaria x ananassa HOM05D004402 ORTHO05D005314 7.0e-194 681.0 510 68.0
VMungo1383G0058 Vigna mungo HOM05D004402 ORTHO05D005314 1.1e-191 673.7 462 72.9
SGA_v2.0_scaffold75G24834 Striga asiatica HOM05D004402 ORTHO05D005314 1.9e-191 672.9 513 69.0
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 8.0e-190 667.5 503 66.4
HPP92_025807 Vanilla planifolia HOM05D004402 ORTHO05D005314 8.0e-190 667.5 510 66.1
Zm00001eb333440 Zea mays HOM05D004402 ORTHO05D005314 1.0e-189 667.2 512 64.6
EL10Ac7g16646 Beta vulgaris HOM05D004402 ORTHO05D005314 2.3e-189 666.0 584 59.4
AUR62042064 Chenopodium quinoa HOM05D004402 ORTHO05D005314 2.3e-189 666.0 511 65.8
FAN02G2572 Fragaria x ananassa HOM05D004402 ORTHO05D005314 3.0e-189 665.6 536 64.9
ECA248G3038 Erigeron canadensis HOM05D004402 ORTHO05D005314 4.8e-187 658.3 500 66.4
Psat3g041880 Pisum sativum HOM05D004402 ORTHO05D005314 5.4e-186 654.8 451 72.1
Lsat_1_v5_gn_1_51600 Lactuca sativa HOM05D004402 ORTHO05D005314 4.5e-185 651.7 500 66.2
Actinidia28911 Actinidia chinensis HOM05D004402 ORTHO05D005314 7.7e-185 651.0 486 67.7
Ah.08g211550 Amaranthus hybridus HOM05D004402 ORTHO05D005314 9.4e-183 644.0 511 63.6
unitig_60.g25815 Utricularia gibba HOM05D004402 ORTHO05D005314 3.0e-181 639.0 512 64.1
BcaC03g13007 Brassica carinata HOM05D004402 ORTHO05D005314 1.1e-178 630.6 455 69.7
Migut.J00646 Erythranthe guttata HOM05D004402 ORTHO05D005314 3.5e-177 625.5 401 76.6
Haze_20522 Corylus avellana HOM05D004402 ORTHO05D005314 5.4e-154 548.5 492 60.2
Mapoly0054s0056 Marchantia polymorpha HOM05D004402 ORTHO05D005314 3.5e-153 545.8 541 52.9
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis HOM05D004402 ORTHO05D005314 1.0e-152 544.3 534 54.3
Hund20335 Selenicereus undatus HOM05D004402 ORTHO05D005314 1.5e-151 540.4 661 47.7
PGSC0003DMG401028184 Solanum tuberosum HOM05D004402 ORTHO05D005314 3.1e-141 506.1 273 89.0
SMO146G0130 Selaginella moellendorffii HOM05D004402 ORTHO05D005314 2.0e-140 503.4 420 60.7
SGA_v2.0_scaffold224G42938 Striga asiatica HOM05D004402 ORTHO05D005314 2.1e-137 493.4 507 55.0
SHI12325 Sapria himalayana HOM05D004402 ORTHO05D005314 3.5e-137 492.7 456 58.3
TPR.G32815 Trifolium pratense HOM05D004402 ORTHO05D005314 1.8e-125 453.8 339 67.8
Gohir.A04G071600 Gossypium hirsutum HOM05D004402 ORTHO05D005314 1.5e-111 407.5 274 74.5
Aqoxy3G01670 Aquilegia oxysepala HOM05D004402 ORTHO05D005314 1.8e-104 384.0 279 68.8
SEGI_14784 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 9.1e-93 345.1 242 71.5
Zm00001eb128460 Zea mays HOM05D004402 ORTHO05D005314 8.5e-83 312.0 251 60.2
Gohir.A04G071700 Gossypium hirsutum HOM05D004402 ORTHO05D005314 9.7e-79 298.5 209 69.4
Zm00001eb127890 Zea mays HOM05D004402 ORTHO05D005314 2.2e-78 297.4 262 58.4
Hma1.2p1_0828F.1_g225130 Hydrangea macrophylla HOM05D004402 ORTHO05D005314 3.1e-77 293.5 215 70.2
HanXRQChr07g0194721 Helianthus annuus HOM05D004402 ORTHO05D005314 3.1e-69 266.9 507 38.7
Cre13.g592500 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D005314 5.9e-60 236.1 571 29.8
PRCOL_00001257 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 3.0e-56 223.8 392 36.0
Os01g0259600 Oryza sativa ssp. japonica HOM05D004402 ORTHO05D005314 2.3e-43 181.0 136 64.7
PGSC0003DMG400003892 Solanum tuberosum HOM05D004402 ORTHO05D005314 6.6e-43 179.5 111 78.4
TAR636G0069 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.6e-41 174.9 189 51.3
TAR636G0130 Trochodendron aralioides HOM05D004402 ORTHO05D005314 7.5e-39 166.0 121 66.1
VMungo1383G2351 Vigna mungo HOM05D004402 ORTHO05D005314 2.2e-38 164.5 110 77.3
PRCOL_00006213 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 2.8e-33 147.5 187 41.2
SalBow3G0082 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.2e-28 132.1 245 36.7
SalBow3G2408 Salvia bowleyana HOM05D004402 ORTHO05D005314 3.5e-28 130.6 245 36.3
TPR.G11110 Trifolium pratense HOM05D004402 ORTHO05D005314 4.6e-28 130.2 68 86.8
SalBow3G1023 Salvia bowleyana HOM05D004402 ORTHO05D005314 5.8e-23 113.2 101 63.4
Cfa022272 Carpinus fangiana HOM05D004402 ORTHO05D005314 3.0e-19 100.9 169 30.2
HanXRQChr13g0396631 Helianthus annuus HOM05D004402 ORTHO05D005314 2.6e-15 87.8 82 58.5
CBR_g4033 Chara braunii HOM05D004402 ORTHO05D005314 4.9e-14 83.6 113 44.2
CAN.G900.20 Capsicum annuum HOM05D004402 ORTHO05D005314 8.4e-14 82.8 76 59.2
TAR636G1582 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.4e-08 65.5 36 86.1
Cre01.g026650 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D007141 9.0e-08 62.8 149 33.6
Lsat_1_v5_gn_6_17200 Lactuca sativa HOM05D004402 ORTHO05D005314 1.2e-07 62.4 86 41.9
CBR_g4032 Chara braunii HOM05D004402 ORTHO05D043925 5.8e-07 60.1 36 72.2
ECA233G2956 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-06 57.8 108 41.7
Cfa025539 Carpinus fangiana HOM05D003439 ORTHO05D004062 4.9e-06 57.0 135 29.6


User provided reference genes

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