Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 6.6e-145 517.3 255 100.0
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 2.5e-112 409.1 243 84.0
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 9.7e-112 407.1 243 83.5
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 1.2e-109 400.2 243 82.3
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 2.6e-109 399.1 244 82.4
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 2.6e-109 399.1 244 82.4
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 6.1e-90 334.7 240 67.9
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 2.0e-88 329.7 252 69.4
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 3.5e-85 318.9 237 69.2
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 2.2e-84 316.2 236 68.2
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 3.8e-84 315.5 251 64.9
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.2e-83 312.4 196 76.0
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.2e-83 312.4 226 69.0
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 3.2e-83 312.4 226 69.0
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 3.2e-83 312.4 240 67.1
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 4.2e-83 312.0 230 70.4
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 9.4e-83 310.8 235 67.2
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 1.2e-82 310.5 204 74.5
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 1.6e-82 310.1 245 64.9
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 3.6e-82 308.9 202 72.8
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 8.0e-82 307.8 240 67.1
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 1.8e-81 306.6 249 64.7
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 1.8e-81 306.6 242 66.1
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 2.3e-81 306.2 250 65.6
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 3.0e-81 305.8 235 66.8
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 5.2e-81 305.1 246 65.4
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 2.6e-80 302.8 261 62.5
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 2.6e-80 302.8 237 65.0
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 2.6e-80 302.8 241 63.9
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 7.5e-80 301.2 225 67.6
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 7.5e-80 301.2 252 63.5
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 2.8e-79 299.3 239 64.0
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 1.1e-78 297.4 234 65.0
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 7.0e-78 294.7 241 61.4
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 7.0e-78 294.7 247 61.9
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 9.1e-78 294.3 250 64.0
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 3.5e-77 292.4 247 60.7
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 1.0e-76 290.8 207 68.6
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.0e-76 290.8 215 67.0
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 1.3e-76 290.4 240 63.8
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 1.7e-76 290.0 227 64.8
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 2.3e-76 289.7 220 67.3
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 3.8e-76 288.9 196 72.4
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 5.0e-76 288.5 199 71.4
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 8.6e-76 287.7 241 63.5
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 1.1e-75 287.3 276 56.9
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 1.5e-75 287.0 201 69.2
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 1.5e-75 287.0 246 62.6
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 1.5e-75 287.0 253 60.1
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 1.9e-75 286.6 239 62.3
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 1.9e-75 286.6 199 70.9
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 2.5e-75 286.2 242 63.2
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 3.3e-75 285.8 248 62.9
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 3.3e-75 285.8 246 59.8
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.3e-75 285.8 240 64.2
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.3e-75 285.8 240 64.2
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.3e-75 285.8 240 64.2
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 3.3e-75 285.8 239 63.6
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 4.2e-75 285.4 163 82.2
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 9.5e-75 284.3 239 64.0
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 9.5e-75 284.3 239 64.0
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.2e-74 283.9 226 64.6
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.6e-74 283.5 240 63.8
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 2.8e-74 282.7 199 69.8
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 6.1e-74 281.6 166 80.7
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 8.0e-74 281.2 235 63.4
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 8.0e-74 281.2 244 61.1
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 1.4e-73 280.4 237 62.4
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 1.8e-73 280.0 183 72.7
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 3.0e-73 279.3 248 60.1
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 3.0e-73 279.3 244 59.8
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 3.0e-73 279.3 244 59.8
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.0e-73 278.9 221 62.9
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.0e-73 278.9 221 62.9
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 4.0e-73 278.9 181 75.7
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 5.2e-73 278.5 198 70.2
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 6.8e-73 278.1 271 56.8
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 8.9e-73 277.7 193 69.4
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 2.6e-72 276.2 197 70.1
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 2.6e-72 276.2 181 72.9
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 3.4e-72 275.8 235 62.1
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 3.4e-72 275.8 235 62.1
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 4.4e-72 275.4 196 67.9
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 4.4e-72 275.4 304 52.0
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 4.4e-72 275.4 183 72.1
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 7.5e-72 274.6 241 59.3
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 9.8e-72 274.2 160 78.8
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 9.8e-72 274.2 235 60.9
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 2.2e-71 273.1 222 63.5
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 8.3e-71 271.2 195 66.7
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.8e-70 270.0 244 57.8
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 2.4e-70 269.6 211 63.5
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 2.4e-70 269.6 201 63.7
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 1.2e-69 267.3 164 77.4
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 1.7e-68 263.5 226 60.2
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 4.4e-64 248.8 169 72.8
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 1.1e-62 244.2 163 73.0
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 4.1e-62 242.3 165 73.3
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 5.0e-60 235.3 190 58.9
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 8.6e-60 234.6 220 57.3
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 1.5e-56 223.8 194 58.2
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 5.8e-56 221.9 229 53.3
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 7.5e-56 221.5 187 56.7
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 2.9e-55 219.5 190 63.2
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 2.7e-53 213.0 110 90.0
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 1.5e-51 207.2 131 76.3
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 7.1e-46 188.3 131 69.5
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 1.0e-44 184.5 132 66.7
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 4.3e-43 179.1 150 62.7
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 6.2e-42 175.3 150 60.0
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 4.2e-38 162.5 90 82.2
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.5e-35 154.1 146 55.5
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.7e-31 140.6 107 63.6
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 2.5e-27 126.7 91 64.8
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 1.6e-26 124.0 154 46.8
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 4.0e-25 119.4 114 59.6
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 4.2e-22 109.4 54 92.6
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.4e-17 94.4 49 85.7
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 2.0e-16 90.5 56 75.0
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 2.5e-14 83.6 99 43.4
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 8.7e-12 75.1 38 78.9
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 2.2e-07 60.5 31 87.1
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 8.4e-07 58.5 62 46.8


User provided reference genes

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