Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 1.7e-66 255.8 121 100.0
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.2e-61 238.8 121 90.9
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 8.2e-61 236.9 121 90.1
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 8.2e-61 236.9 121 90.1
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 1.4e-60 236.1 121 89.3
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.4e-60 235.3 121 89.3
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 5.3e-60 234.2 121 88.4
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 1.9e-57 225.7 121 87.6
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 5.5e-57 224.2 119 84.9
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 9.4e-57 223.4 119 84.0
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 1.6e-56 222.6 119 84.0
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.7e-56 221.9 119 84.0
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 3.6e-56 221.5 119 84.9
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 6.1e-56 220.7 119 85.7
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 8.0e-56 220.3 119 84.0
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 1.0e-55 219.9 120 85.8
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 1.0e-55 219.9 119 84.9
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 1.8e-55 219.2 119 83.2
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 4.0e-55 218.0 119 84.9
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 5.2e-55 217.6 118 83.9
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 8.8e-55 216.9 119 84.0
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 2.0e-54 215.7 119 81.5
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 2.0e-54 215.7 119 80.7
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 2.0e-54 215.7 119 84.0
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.6e-54 215.3 119 81.5
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 5.7e-54 214.2 119 80.7
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 7.5e-54 213.8 119 82.4
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 9.7e-54 213.4 119 80.7
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 1.3e-53 213.0 119 80.7
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 6.3e-53 210.7 119 80.7
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 8.2e-53 210.3 119 79.0
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 1.1e-52 209.9 119 79.8
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 1.4e-52 209.5 119 81.5
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 2.4e-52 208.8 119 79.8
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 3.1e-52 208.4 126 81.0
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 3.1e-52 208.4 119 78.2
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 5.3e-52 207.6 117 80.3
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 5.3e-52 207.6 119 79.8
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 7.0e-52 207.2 119 79.8
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 7.0e-52 207.2 117 80.3
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 1.2e-51 206.5 119 79.0
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.6e-51 206.1 121 81.8
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.6e-51 206.1 121 81.8
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.6e-51 206.1 121 81.8
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 2.0e-51 205.7 119 79.0
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 2.0e-51 205.7 119 77.3
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 2.7e-51 205.3 119 79.8
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 2.7e-51 205.3 120 82.5
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 4.5e-51 204.5 121 81.0
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.7e-51 203.8 121 81.0
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 3.8e-50 201.4 117 78.6
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 3.8e-50 201.4 119 78.2
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 5.0e-50 201.1 122 79.5
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 5.0e-50 201.1 116 79.3
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 6.5e-50 200.7 119 79.0
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 1.5e-49 199.5 122 78.7
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 1.9e-49 199.1 117 79.5
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 7.2e-49 197.2 119 77.3
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 9.4e-49 196.8 119 75.6
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 1.0e-47 193.4 120 76.7
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 4.0e-47 191.4 133 71.4
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 4.0e-47 191.4 124 71.8
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 8.8e-47 190.3 115 75.7
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 8.8e-47 190.3 124 72.6
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 1.5e-46 189.5 116 75.0
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 3.4e-46 188.3 116 74.1
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 3.4e-46 188.3 116 74.1
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 3.4e-46 188.3 116 74.1
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 3.4e-46 188.3 116 74.1
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 4.4e-46 188.0 117 73.5
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 4.4e-46 188.0 120 73.3
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 7.5e-46 187.2 116 74.1
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 7.5e-46 187.2 116 73.3
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 7.5e-46 187.2 116 73.3
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 1.7e-45 186.0 116 73.3
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 1.7e-45 186.0 116 73.3
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 2.2e-45 185.7 116 73.3
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 3.7e-45 184.9 116 72.4
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 3.7e-45 184.9 116 72.4
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 3.7e-45 184.9 116 72.4
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 6.3e-45 184.1 116 73.3
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 1.1e-44 183.3 116 73.3
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 8.5e-42 173.7 91 86.8
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 3.2e-41 171.8 87 86.2
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 4.2e-41 171.4 115 68.7
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 5.5e-41 171.0 90 82.2
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 5.5e-41 171.0 90 84.4
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 1.2e-40 169.9 130 66.2
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 3.6e-40 168.3 90 83.3
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 1.4e-39 166.4 91 84.6
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 3.0e-39 165.2 90 82.2
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 4.0e-39 164.9 117 67.5
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 4.0e-39 164.9 99 76.8
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 4.0e-39 164.9 87 85.1
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 4.0e-39 164.9 87 82.8
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 2.0e-38 162.5 115 65.2
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 4.9e-37 157.9 87 81.6
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 1.8e-36 156.0 86 79.1
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 2.4e-36 155.6 78 87.2
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 1.2e-35 153.3 86 80.2
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 1.2e-35 153.3 86 80.2
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 3.5e-35 151.8 86 80.2
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 3.5e-35 151.8 86 79.1
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 1.0e-34 150.2 87 73.6
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 6.6e-34 147.5 76 86.8
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 1.1e-33 146.7 86 76.7
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 1.9e-33 146.0 115 60.9
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 1.9e-33 146.0 115 60.9
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 1.2e-32 143.3 89 74.2
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 3.6e-32 141.7 101 68.3
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 4.7e-32 141.4 100 67.0
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 8.0e-32 140.6 84 75.0
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 5.2e-31 137.9 103 64.1
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 3.7e-29 131.7 97 66.0
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 1.0e-26 123.6 81 69.1
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 5.2e-23 111.3 65 73.8
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 6.0e-19 97.8 54 79.6
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 6.2e-16 87.8 121 38.0
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 1.1e-15 87.0 119 45.4
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 8.9e-15 84.0 109 39.4
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 1.3e-13 80.1 115 38.3
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 1.4e-12 76.6 146 34.2
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 2.5e-09 65.9 33 90.9
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 5.6e-09 64.7 30 86.7
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 1.6e-08 63.2 31 90.3
unitig_75.g29315 Utricularia gibba HOM05D006449 ORTHO05D007995 9.9e-06 53.9 25 92.0


User provided reference genes

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