Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 6.7e-154 547.4 286 100.0
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 2.7e-110 402.5 280 77.9
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 2.3e-106 389.4 294 73.8
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.3e-98 362.8 280 72.9
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.3e-98 362.8 280 72.9
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.3e-98 362.8 280 72.9
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.3e-98 362.8 280 72.9
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.3e-98 362.8 280 72.9
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 2.1e-94 349.7 276 69.6
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 1.5e-92 343.6 259 73.0
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 3.5e-86 322.4 278 66.5
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 7.8e-86 321.2 283 64.3
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 9.6e-84 314.3 273 64.1
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.8e-82 310.1 276 64.5
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.8e-82 310.1 276 64.5
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 5.3e-82 308.5 275 64.7
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 4.4e-81 305.4 278 60.8
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 4.9e-80 302.0 296 59.5
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.4e-79 300.4 286 61.5
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.4e-79 300.4 286 61.5
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.4e-79 300.4 286 61.5
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 1.9e-79 300.1 280 63.2
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 4.2e-79 298.9 283 59.7
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 7.1e-79 298.1 278 61.2
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.7e-78 296.2 285 59.6
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.7e-78 296.2 285 59.6
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 2.7e-78 296.2 278 59.7
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.7e-78 296.2 281 61.6
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 3.3e-76 289.3 281 59.1
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 9.6e-76 287.7 286 59.4
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.9e-74 281.6 282 59.2
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 1.1e-71 274.2 275 57.8
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 2.3e-69 266.5 274 57.3
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 2.3e-69 266.5 274 57.3
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 1.1e-68 264.2 279 55.6
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 1.9e-68 263.5 277 55.6
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 1.9e-68 263.5 274 56.6
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.9e-68 263.5 286 57.0
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 1.6e-67 260.4 279 54.5
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 2.8e-67 259.6 279 54.5
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 2.8e-67 259.6 279 54.5
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 2.8e-67 259.6 279 54.5
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.1e-66 257.7 269 57.2
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 1.5e-65 253.8 237 62.0
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 7.6e-65 251.5 281 54.1
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.9e-64 249.6 276 54.7
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 1.1e-63 247.7 240 59.2
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 3.5e-62 242.7 223 65.0
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 7.9e-62 241.5 280 53.6
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-61 240.0 286 53.1
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-61 240.0 291 52.6
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 8.7e-61 238.0 237 58.6
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.5e-57 225.7 208 63.5
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 1.7e-56 223.8 183 67.8
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 6.5e-56 221.9 268 52.6
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 1.6e-54 217.2 273 50.5
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 2.1e-54 216.9 200 64.0
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 5.1e-53 212.2 275 49.5
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.8e-51 205.7 278 47.8
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 2.4e-50 203.4 270 45.9
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.4e-50 203.4 274 47.4
BcaB03g16404 Brassica carinata HOM05D004473 ORTHO05D005652 2.0e-49 200.3 219 54.8
Solyc09g061390.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.8e-45 187.2 120 80.8
Oeu012780.1 Olea europaea HOM05D001387 ORTHO05D001250 1.1e-44 184.5 127 75.6
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 3.3e-44 183.0 167 60.5
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.3e-43 178.7 264 45.8
Nn4g24630 Nelumbo nucifera HOM05D004473 ORTHO05D005652 8.2e-43 178.3 178 59.0
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 4.5e-41 172.6 135 68.9
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 1.0e-40 171.4 284 41.5
Nitab4.5_0001439g0120 Nicotiana tabacum HOM05D004473 ORTHO05D005652 4.2e-39 166.0 97 85.6
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.1e-36 157.9 266 42.1
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 3.7e-35 152.9 197 50.8
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.6e-33 147.5 173 51.4
HanXRQChr00c0524g0575451 Helianthus annuus HOM05D004473 ORTHO05D005652 1.3e-32 144.4 230 44.8
HanXRQChr16g0503961 Helianthus annuus HOM05D004473 ORTHO05D005652 1.2e-30 137.9 112 66.1
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 2.3e-29 133.7 133 60.9
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 3.0e-29 133.3 140 57.1
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.2e-28 131.3 149 53.7
Peaxi162Scf00219g00049 Petunia axillaris HOM05D004473 ORTHO05D005652 1.2e-28 131.3 71 88.7
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 3.3e-28 129.8 151 49.7
Gohir.A08G070362 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.1e-26 121.7 144 54.2
arahy.Tifrunner.gnm1.ann1.EJ7WQI Arachis hypogaea HOM05D004473 ORTHO05D005652 1.2e-25 121.3 125 56.8
BraSC59t46519Z Brassica rapa HOM05D004473 ORTHO05D005652 6.5e-24 115.5 117 57.3
Gorai.001G230600 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.5e-23 114.4 133 56.4
Gorai.013G056700 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.2e-22 111.3 122 54.9
HanXRQChr00c0165g0572181 Helianthus annuus HOM05D004473 ORTHO05D005652 2.7e-22 110.2 119 58.8
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 2.3e-21 107.1 93 63.4
Gohir.A07G155811 Gossypium hirsutum HOM05D004473 ORTHO05D005652 5.7e-20 102.4 72 69.4
Medtr7g117940 Medicago truncatula HOM05D004473 ORTHO05D005652 7.5e-20 102.1 79 64.6
Nn1g08463 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.4e-18 97.8 83 62.7
HanXRQChr00c0165g0572171 Helianthus annuus HOM05D004473 ORTHO05D005652 1.1e-15 88.2 73 58.9
Medtr7g098060 Medicago truncatula HOM05D004473 ORTHO05D005652 1.8e-10 70.9 128 40.6
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.1e-10 70.1 72 55.6
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 3.1e-10 70.1 72 55.6
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 2.7e-09 67.0 51 68.6
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.0e-08 65.1 86 50.0
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 8.6e-08 62.0 48 66.7
Lalb_Chr13g0292931 Lupinus albus HOM05D004473 ORTHO05D005652 2.5e-07 60.5 57 54.4
MD15G1438900 Malus domestica HOM05D004473 ORTHO05D005652 7.3e-07 58.9 40 67.5
TPR.G7920 Trifolium pratense HOM05D004473 ORTHO05D005652 7.3e-07 58.9 67 58.2
Oeu022565.1 Olea europaea HOM05D004473 ORTHO05D005652 1.2e-06 58.2 39 74.4


User provided reference genes

Program Settings