Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 1.5e-65 252.7 127 100.0
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 8.6e-61 236.9 122 96.7
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 4.3e-60 234.6 122 95.9
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 4.3e-60 234.6 122 95.9
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 4.3e-60 234.6 122 95.9
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 4.3e-60 234.6 122 95.9
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 4.3e-60 234.6 122 95.9
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 4.3e-60 234.6 122 95.9
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 5.6e-60 234.2 122 95.9
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 5.6e-60 234.2 122 95.9
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 6.2e-59 230.7 122 94.3
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 2.9e-56 221.9 122 91.0
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 1.9e-55 219.2 122 88.5
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.1e-52 209.9 122 82.8
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 1.5e-52 209.5 125 82.4
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 2.1e-51 205.7 108 94.4
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.1e-51 205.7 122 82.8
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.1e-51 205.7 122 82.8
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.1e-51 205.7 122 82.8
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.1e-51 205.7 122 82.8
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.2e-51 204.1 122 82.0
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.1e-51 203.8 122 82.0
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 1.1e-50 203.4 121 84.3
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.4e-50 203.0 122 79.5
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.4e-50 203.0 122 79.5
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.4e-50 203.0 122 81.1
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 3.1e-50 201.8 122 81.1
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 3.1e-50 201.8 122 81.1
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 4.0e-50 201.4 122 79.5
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 2.0e-49 199.1 122 77.9
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 2.2e-48 195.7 122 77.9
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 2.9e-48 195.3 122 77.0
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 1.4e-47 193.0 122 77.0
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 3.2e-47 191.8 119 81.5
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 1.0e-45 186.8 120 76.7
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 1.3e-45 186.4 121 75.2
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 3.0e-45 185.3 122 75.4
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 6.6e-45 184.1 123 75.6
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 6.6e-45 184.1 123 77.2
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 6.6e-45 184.1 123 77.2
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-44 183.3 122 76.2
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 4.3e-44 181.4 122 73.8
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 1.6e-43 179.5 122 75.4
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 2.8e-43 178.7 109 77.1
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 2.8e-43 178.7 122 75.4
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 8.1e-43 177.2 122 72.1
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 8.1e-43 177.2 122 72.1
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 8.1e-43 177.2 122 72.1
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 8.1e-43 177.2 122 72.1
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 8.1e-43 177.2 122 72.1
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 8.1e-43 177.2 122 72.1
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 8.1e-43 177.2 122 72.1
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.4e-42 176.4 122 73.0
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 4.0e-42 174.9 122 71.3
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 6.9e-42 174.1 122 70.5
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 1.2e-41 173.3 120 71.7
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 3.4e-41 171.8 123 78.9
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-40 169.5 114 74.6
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 8.4e-40 167.2 106 76.4
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 1.9e-39 166.0 85 94.1
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 3.2e-39 165.2 131 68.7
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 4.2e-39 164.9 122 68.0
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 9.3e-39 163.7 121 71.9
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 3.3e-36 155.2 126 64.3
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 7.4e-36 154.1 108 72.2
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 4.8e-35 151.4 102 73.5
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 1.4e-34 149.8 123 66.7
CAN.G156.6 Capsicum annuum HOM05D004473 ORTHO05D005652 3.1e-34 148.7 106 72.6
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 5.3e-34 147.9 122 65.6
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 6.9e-34 147.5 112 69.6
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 6.9e-34 147.5 112 69.6
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 6.9e-34 147.5 121 66.1
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 6.9e-34 147.5 103 71.8
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.5e-33 146.4 122 60.7
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 4.9e-32 141.4 123 65.0
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 3.9e-29 131.7 95 68.4
CAN.G130.4 Capsicum annuum HOM05D004473 ORTHO05D005652 5.6e-28 127.9 74 79.7
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.8e-27 125.6 125 56.0
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 3.1e-26 122.1 125 56.0
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.0e-26 121.7 125 57.6
arahy.Tifrunner.gnm1.ann1.85ZYV6 Arachis hypogaea HOM05D004473 ORTHO05D005652 9.0e-26 120.6 117 58.1
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.0e-26 120.6 76 75.0
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 3.8e-24 115.2 72 75.0
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.1e-23 113.6 72 76.4
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.1e-23 113.6 76 71.1
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.6e-22 108.2 122 53.3
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 7.9e-22 107.5 75 66.7
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 1.8e-18 96.3 61 68.9
Gorai.003G179600 Gossypium raimondii HOM05D004473 ORTHO05D005652 5.3e-18 94.7 65 69.2
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 6.5e-16 87.8 69 60.9
Hund04106 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.2e-15 85.5 125 43.2
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 2.1e-14 82.8 122 42.6
Nn020s41490 Nelumbo nucifera HOM05D004473 ORTHO05D005652 2.7e-14 82.4 49 85.7
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 1.0e-13 80.5 74 52.7
Nn8g40470 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.4e-13 80.1 49 83.7
Migut.D01003 Erythranthe guttata HOM05D004473 ORTHO05D005652 1.8e-13 79.7 70 61.4
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-13 79.3 52 75.0
GSVIVG01020677001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.1e-12 77.0 46 71.7
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 4.3e-12 75.1 44 81.8
Gorai.005G171000 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.3e-11 73.6 47 72.3
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.1e-10 70.5 122 37.7
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 1.8e-10 69.7 42 88.1
Oeu020582.1 Olea europaea HOM05D004473 ORTHO05D005652 2.4e-10 69.3 38 78.9
AUR62037881 Chenopodium quinoa HOM05D001387 ORTHO05D001250 5.3e-10 68.2 42 71.4
Medtr2g089590 Medicago truncatula HOM05D004473 ORTHO05D005652 9.1e-10 67.4 50 74.0
TPR.G40775 Trifolium pratense HOM05D004473 ORTHO05D005652 1.5e-09 66.6 45 71.1
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 7.7e-09 64.3 41 70.7
SMO086G0023 Selaginella moellendorffii HOM05D004473 ORTHO05D005652 1.0e-08 63.9 103 37.9
GSVIVG01001302001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.4e-07 60.1 51 64.7
TPR.G40774 Trifolium pratense HOM05D004473 ORTHO05D005652 2.5e-07 59.3 42 76.2
Mapoly1406s0001 Marchantia polymorpha HOM05D004473 ORTHO05D005652 4.2e-07 58.5 62 43.5
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 7.2e-07 57.8 42 66.7
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 7.2e-07 57.8 39 71.8
CsaV3_4G012020 Cucumis sativus L. HOM05D003614 ORTHO05D004156 6.1e-06 54.7 105 33.3


User provided reference genes

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