Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 5.6e-138 494.2 237 100.0
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 9.1e-64 247.7 218 59.6
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 3.8e-62 242.3 249 54.2
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 1.5e-58 230.3 253 49.8
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 2.6e-58 229.6 253 49.8
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 9.8e-58 227.6 255 50.6
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.7e-46 190.3 231 46.8
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 3.6e-44 182.6 254 43.7
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 4.7e-44 182.2 280 40.0
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.0e-43 181.0 252 44.0
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 1.2e-42 177.6 252 42.5
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 1.3e-41 174.1 249 42.6
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 2.9e-41 172.9 245 42.4
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 4.6e-39 165.6 267 38.2
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 3.3e-37 159.5 284 39.1
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 1.2e-36 157.5 257 39.3
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 4.7e-36 155.6 264 37.5
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 5.2e-35 152.1 278 38.5
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 6.8e-35 151.8 239 39.3
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 4.9e-33 145.6 239 38.1
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 4.9e-33 145.6 239 38.1
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 6.4e-33 145.2 239 38.1
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 2.4e-32 143.3 223 40.8
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 2.1e-31 140.2 238 38.2
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 7.8e-31 138.3 259 37.1
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 2.3e-30 136.7 244 38.5
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 3.9e-30 136.0 224 39.3
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 2.5e-29 133.3 230 37.8
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 4.7e-28 129.0 240 37.1
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 8.1e-28 128.3 259 34.0
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 1.1e-27 127.9 251 37.1
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 1.4e-27 127.5 233 37.3
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 1.4e-27 127.5 232 36.6
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.2e-27 125.6 246 36.2
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 8.9e-27 124.8 216 34.7
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 1.2e-26 124.4 239 36.0
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 2.0e-26 123.6 245 36.3
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 2.0e-26 123.6 217 35.5
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 2.6e-26 123.2 251 34.7
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 5.8e-26 122.1 235 36.6
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 7.6e-26 121.7 234 34.6
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.7e-25 120.6 252 34.5
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.7e-25 120.6 247 36.0
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.9e-25 119.8 251 34.7
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 4.9e-25 119.0 244 33.2
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 4.9e-25 119.0 260 29.2
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 6.4e-25 118.6 251 35.5
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 8.3e-25 118.2 249 35.7
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 1.1e-24 117.9 231 35.1
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 1.4e-24 117.5 254 33.1
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 1.4e-24 117.5 253 34.4
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 1.4e-24 117.5 261 34.1
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 1.9e-24 117.1 232 33.2
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 2.1e-23 113.6 242 32.2
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 2.1e-23 113.6 229 33.6
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 2.1e-23 113.6 240 32.1
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 7.8e-23 111.7 246 34.6
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 1.0e-22 111.3 242 32.2
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 1.0e-22 111.3 264 33.3
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.9e-21 107.1 273 29.7
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 4.3e-21 105.9 233 32.2
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 5.6e-21 105.5 108 52.8
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 7.3e-21 105.1 234 32.1
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 7.3e-21 105.1 243 30.5
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 7.3e-21 105.1 230 32.6
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.6e-20 104.0 264 29.9
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.6e-20 104.0 253 29.2
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 1.6e-20 104.0 109 49.5
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 2.1e-20 103.6 256 29.3
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 2.8e-20 103.2 255 30.6
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 4.7e-20 102.4 89 53.9
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 6.2e-20 102.1 242 30.2
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 1.4e-19 100.9 220 29.5
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 1.8e-19 100.5 247 32.0
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 1.8e-19 100.5 246 30.9
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 6.8e-19 98.6 230 31.3
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 8.9e-19 98.2 230 32.6
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 8.9e-19 98.2 235 29.8
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 1.2e-18 97.8 238 27.3
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 2.0e-18 97.1 243 29.6
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 4.4e-18 95.9 229 30.6
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 1.3e-17 94.4 253 28.5
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 3.8e-17 92.8 229 29.7
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 1.1e-16 91.3 103 49.5
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 3.2e-16 89.7 219 32.9
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 5.4e-16 89.0 273 27.8
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 2.1e-15 87.0 243 28.0
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 1.0e-14 84.7 253 29.6
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 3.3e-13 79.7 100 44.0
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 2.1e-12 77.0 224 28.1
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 2.0e-10 70.5 107 33.6
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 3.4e-10 69.7 243 24.3
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 5.8e-10 68.9 150 32.7
Sc20g0006720 Simmondsia chinensis HOM05D007097 ORTHO05D008131 5.8e-10 68.9 224 27.7
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 9.9e-10 68.2 100 34.0
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 9.9e-10 68.2 109 40.4
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 9.9e-10 68.2 101 35.6
Os04g0685700 Oryza sativa ssp. japonica HOM05D007097 ORTHO05D008131 7.1e-08 62.0 260 22.3
CBR_g27764 Chara braunii HOM05D017347 ORTHO05D008131 9.3e-08 61.6 101 33.7
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 6.0e-07 58.9 64 40.6


User provided reference genes

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