Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 9.9e-138 493.4 245 100.0
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 5.8e-106 387.9 245 80.4
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 5.8e-106 387.9 243 79.4
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 1.3e-105 386.7 245 81.2
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 2.2e-105 386.0 243 78.6
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 2.9e-105 385.6 243 79.0
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 6.0e-103 377.9 245 79.6
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 2.4e-51 206.5 249 48.6
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.3e-49 199.9 247 46.2
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 2.3e-49 199.9 248 44.8
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 3.8e-49 199.1 245 45.7
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 2.8e-47 193.0 248 46.8
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 2.6e-45 186.4 225 46.7
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 2.9e-44 183.0 247 44.1
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 4.9e-44 182.2 245 44.5
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.0e-41 174.5 263 40.7
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 1.3e-41 174.1 254 39.4
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 1.7e-41 173.7 255 44.7
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 2.3e-41 173.3 246 45.1
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 5.0e-41 172.2 254 42.5
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.2e-39 167.5 259 41.7
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 2.1e-39 166.8 245 42.9
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 2.8e-39 166.4 228 40.4
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 2.8e-39 166.4 260 41.5
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 2.8e-39 166.4 275 37.8
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 4.7e-39 165.6 253 40.7
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 1.2e-37 161.0 250 40.8
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 2.0e-37 160.2 265 38.9
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 3.4e-37 159.5 253 39.5
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 5.8e-37 158.7 231 42.4
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 1.7e-36 157.1 264 37.9
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 1.7e-36 157.1 259 38.6
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 2.2e-36 156.8 267 38.2
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 1.9e-35 153.7 227 40.5
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.4e-35 153.3 195 46.2
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 2.4e-35 153.3 255 39.2
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 2.4e-35 153.3 242 38.8
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 3.2e-35 152.9 253 38.7
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 3.2e-35 152.9 267 40.4
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 7.0e-35 151.8 232 41.8
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 9.2e-35 151.4 232 40.9
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 1.2e-34 151.0 267 38.2
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 1.6e-34 150.6 199 47.2
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 2.7e-34 149.8 269 37.2
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 6.0e-34 148.7 272 36.4
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 1.0e-33 147.9 210 39.5
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.3e-33 147.5 262 37.8
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.3e-33 147.5 253 38.7
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 1.3e-33 147.5 216 43.1
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 3.0e-33 146.4 282 35.8
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 3.9e-33 146.0 262 36.3
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.1e-32 144.4 265 35.8
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 1.1e-32 144.4 252 38.9
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 1.5e-32 144.1 266 35.7
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 3.3e-32 142.9 262 37.0
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 7.3e-32 141.7 221 38.5
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 9.5e-32 141.4 263 36.9
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 1.2e-31 141.0 232 39.7
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 2.1e-31 140.2 256 37.5
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 2.8e-31 139.8 274 36.5
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 3.6e-31 139.4 247 37.7
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 4.7e-31 139.0 284 34.9
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 8.1e-31 138.3 233 36.9
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 1.1e-30 137.9 245 36.3
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 8.9e-30 134.8 218 38.5
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 1.2e-29 134.4 239 40.2
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 1.2e-29 134.4 266 34.6
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 1.5e-29 134.0 224 39.7
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 7.5e-29 131.7 260 35.0
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 7.5e-29 131.7 227 39.2
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.3e-28 131.0 235 37.0
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 1.7e-28 130.6 226 36.7
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 2.2e-28 130.2 214 40.2
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 3.2e-27 126.3 232 37.5
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 2.1e-26 123.6 264 34.8
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 3.5e-26 122.9 247 36.0
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 2.3e-25 120.2 97 59.8
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 2.3e-25 120.2 252 34.1
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 3.0e-25 119.8 290 32.8
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 2.5e-24 116.7 273 30.8
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 1.2e-23 114.4 230 33.9
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 6.4e-20 102.1 225 33.3
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 8.4e-20 101.7 89 53.9
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 1.6e-18 97.4 83 56.6
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 1.6e-18 97.4 81 55.6
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 2.1e-18 97.1 81 55.6
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 2.7e-18 96.7 77 57.1
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 4.6e-18 95.9 90 51.1
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 7.8e-18 95.1 90 51.1
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 1.3e-17 94.4 145 40.0
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 1.3e-17 94.4 145 40.0
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 1.3e-17 94.4 145 40.0
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 1.3e-17 94.4 145 40.0
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 1.3e-17 94.4 145 40.0
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 1.7e-17 94.0 169 38.5
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 3.0e-17 93.2 90 51.1
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 3.0e-17 93.2 260 30.8
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 6.6e-17 92.0 90 50.0
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 1.2e-15 87.8 77 51.9
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 5.8e-13 79.0 94 41.5
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 2.3e-09 67.0 67 47.8
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 6.6e-09 65.5 93 39.8
Hund25504 Selenicereus undatus HOM05D002304 ORTHO05D002363 2.8e-07 60.1 84 39.3
CDE01G0585 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 1.1e-06 58.2 56 50.0
Sc11g0000170 Simmondsia chinensis HOM05D002304 ORTHO05D002363 1.1e-06 58.2 109 33.0
QL03p049930 Quercus lobata HOM05D002304 ORTHO05D002363 1.4e-06 57.8 65 38.5
Manes.09G186400 Manihot esculenta HOM05D002304 ORTHO05D002363 1.8e-06 57.4 65 40.0
EL10Ac6g13591 Beta vulgaris HOM05D002304 ORTHO05D002363 2.4e-06 57.0 80 37.5
CANSAT01G2027 Cannabis sativa HOM05D002304 ORTHO05D002363 2.4e-06 57.0 60 43.3
Phvul.008G018600 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 3.1e-06 56.6 63 39.7
vmacro16079 Vaccinium macrocarpon HOM05D002304 ORTHO05D002363 4.0e-06 56.2 57 47.4
Aqoxy5G03199 Aquilegia oxysepala HOM05D002304 ORTHO05D002363 5.3e-06 55.8 70 42.9
Potri.001G062800 Populus trichocarpa HOM05D002304 ORTHO05D002363 5.3e-06 55.8 67 43.3
Potri.003G164600 Populus trichocarpa HOM05D002304 ORTHO05D002363 5.3e-06 55.8 67 43.3
Sabra01G0045200 Salix brachista HOM05D002304 ORTHO05D002363 5.3e-06 55.8 67 43.3
Sabra03G0119800 Salix brachista HOM05D002304 ORTHO05D002363 5.3e-06 55.8 67 43.3
CSS0042081 Camellia sinensis var. sinensis HOM05D002304 ORTHO05D002363 6.9e-06 55.5 60 43.3
CiPaw.05G103300 Carya illinoinensis HOM05D002304 ORTHO05D002363 6.9e-06 55.5 65 38.5
Hma1.2p1_0459F.1_g157130 Hydrangea macrophylla HOM05D002304 ORTHO05D002363 6.9e-06 55.5 57 45.6
Mapoly0108s0003 Marchantia polymorpha HOM05D002304 ORTHO05D002363 6.9e-06 55.5 62 45.2
Mapoly0110s0051 Marchantia polymorpha HOM05D002304 ORTHO05D002363 6.9e-06 55.5 62 45.2
Rhsim12G0098700 Rhododendron simsii HOM05D002304 ORTHO05D002363 6.9e-06 55.5 57 45.6
Actinidia34006 Actinidia chinensis HOM05D002304 ORTHO05D002363 9.0e-06 55.1 57 45.6
CiPaw.06G108100 Carya illinoinensis HOM05D002304 ORTHO05D002363 9.0e-06 55.1 65 38.5
AUR62005698 Chenopodium quinoa HOM05D002304 ORTHO05D002363 9.0e-06 55.1 90 36.7
Haze_12481 Corylus avellana HOM05D002304 ORTHO05D002363 9.0e-06 55.1 65 36.9
Peaxi162Scf00128g01713 Petunia axillaris HOM05D002304 ORTHO05D002363 9.0e-06 55.1 70 38.6
SMO364G0391 Selaginella moellendorffii HOM05D002304 ORTHO05D002363 9.0e-06 55.1 53 45.3


User provided reference genes

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