Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00080g00510 Petunia axillaris HOM05D011856 ORTHO05D013014 7.1e-95 350.5 169 100.0
SalBow1G6083 Salvia bowleyana HOM05D008259 ORTHO05D013014 9.5e-39 164.1 113 75.2
Sed0008539 Sechium edule HOM05D008259 ORTHO05D013014 1.1e-23 114.0 102 64.7
DCAR_003888 Daucus carota HOM05D004182 ORTHO05D004271 9.2e-18 94.4 50 88.0
Nitab4.5_0014528g0020 Nicotiana tabacum HOM05D008259 ORTHO05D004271 6.0e-17 91.7 52 82.7
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 1.7e-16 90.1 184 37.0
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 5.1e-16 88.6 50 82.0
Gohir.D05G007050 Gossypium hirsutum HOM05D004182 ORTHO05D004271 6.6e-16 88.2 49 85.7
Sc23g0003920 Simmondsia chinensis HOM05D000806 ORTHO05D002320 5.6e-15 85.1 46 87.0
EL10Ac7g17375 Beta vulgaris HOM05D004182 ORTHO05D004271 1.2e-14 84.0 55 70.9
EL10As15g24134 Beta vulgaris HOM05D004182 ORTHO05D004271 1.2e-14 84.0 55 70.9
Nitab4.5_0001554g0040 Nicotiana tabacum HOM05D004182 ORTHO05D004271 1.2e-14 84.0 45 84.4
Migut.D01390 Erythranthe guttata HOM05D004182 ORTHO05D004271 1.6e-14 83.6 43 90.7
Migut.D01394 Erythranthe guttata HOM05D004182 ORTHO05D004271 1.6e-14 83.6 43 90.7
Nitab4.5_0000046g0170 Nicotiana tabacum HOM05D020983 ORTHO05D020217 1.6e-14 83.6 98 51.0
Gorai.003G057800 Gossypium raimondii HOM05D004182 ORTHO05D004271 4.7e-14 82.0 50 78.0
Nitab4.5_0001577g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 4.7e-14 82.0 63 68.3
Peaxi162Scf00080g00514 Petunia axillaris HOM05D011856 ORTHO05D013014 4.7e-14 82.0 48 81.2
Psat0s9163g0080 Pisum sativum HOM05D004182 ORTHO05D007321 1.4e-13 80.5 49 79.6
Psat5g118800 Pisum sativum HOM05D004182 ORTHO05D007321 3.1e-13 79.3 49 77.6
arahy.Tifrunner.gnm1.ann1.XUX2EX Arachis hypogaea HOM05D000963 ORTHO05D004271 5.2e-13 78.6 53 71.7
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 6.8e-13 78.2 46 78.3
Gohir.D03G055050 Gossypium hirsutum HOM05D004182 ORTHO05D004271 6.8e-13 78.2 50 74.0
Nitab4.5_0001379g0030 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.8e-13 78.2 50 74.0
arahy.Tifrunner.gnm1.ann1.Y4U9X5 Arachis hypogaea HOM05D008259 ORTHO05D004271 8.9e-13 77.8 43 83.7
Oeu010689.1 Olea europaea HOM05D011856 ORTHO05D013014 4.4e-12 75.5 47 76.6
MELO3C025036.2 Cucumis melo HOM05D011856 ORTHO05D013014 5.8e-12 75.1 48 79.2
Lsat_1_v5_gn_1_88141 Lactuca sativa HOM05D011856 ORTHO05D013014 5.8e-12 75.1 51 76.5
Lsat_1_v5_gn_2_31300 Lactuca sativa HOM05D001070 ORTHO05D002096 5.8e-12 75.1 45 82.2
Lsat_1_v5_gn_2_97160 Lactuca sativa HOM05D011856 ORTHO05D013014 5.8e-12 75.1 51 76.5
Lsat_1_v5_gn_3_45940 Lactuca sativa HOM05D011856 ORTHO05D013014 5.8e-12 75.1 51 76.5
Lsat_1_v5_gn_5_181940 Lactuca sativa HOM05D011856 ORTHO05D013014 5.8e-12 75.1 51 76.5
Lsat_1_v5_gn_5_47101 Lactuca sativa HOM05D011856 ORTHO05D013014 5.8e-12 75.1 51 76.5
BcaNung07086 Brassica carinata HOM05D001966 ORTHO05D011119 1.7e-11 73.6 45 80.0
Ca_24279_v3 Cicer arietinum L. HOM05D004182 ORTHO05D004271 4.9e-11 72.0 45 77.8
MELO3C001082.2 Cucumis melo HOM05D011856 ORTHO05D013014 4.9e-11 72.0 43 81.4
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 1.4e-10 70.5 58 63.8
Atru.chr6.228 Acer truncatum HOM05D004182 ORTHO05D004271 4.1e-10 68.9 42 73.8
Oeu051132.1 Olea europaea HOM05D011856 ORTHO05D013014 9.2e-10 67.8 40 72.5
arahy.Tifrunner.gnm1.ann1.WY6BZE Arachis hypogaea HOM05D004182 ORTHO05D010127 1.2e-09 67.4 106 43.4
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 7.8e-09 64.7 48 68.8
vmacro22394 Vaccinium macrocarpon HOM05D008259 ORTHO05D004271 7.8e-09 64.7 50 68.0
arahy.Tifrunner.gnm1.ann1.T8J8BP Arachis hypogaea HOM05D000216 ORTHO05D003638 1.0e-08 64.3 33 87.9
A08p09050 Brassica napus HOM05D001966 ORTHO05D010127 3.9e-08 62.4 31 93.5
Gohir.1Z050082 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.9e-08 62.4 31 93.5
Gohir.A04G039225 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.9e-08 62.4 31 93.5
FAN13G1592 Fragaria x ananassa HOM05D001966 ORTHO05D010127 5.1e-08 62.0 34 85.3
arahy.Tifrunner.gnm1.ann1.UVG9XA Arachis hypogaea HOM05D001966 ORTHO05D010127 1.1e-07 60.8 33 84.8
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 1.5e-07 60.5 31 87.1
Gohir.D11G140550 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.5e-07 59.7 31 87.1
Peaxi162Scf01071g00036 Petunia axillaris HOM05D001966 ORTHO05D010127 2.5e-07 59.7 31 90.3
Gorai.002G166100 Gossypium raimondii HOM05D001966 ORTHO05D010127 3.3e-07 59.3 32 87.5
Gohir.A01G139755 Gossypium hirsutum HOM05D001966 ORTHO05D010127 5.6e-07 58.5 31 90.3
Gorai.007G150800 Gossypium raimondii HOM05D001966 ORTHO05D010127 5.6e-07 58.5 31 87.1
Nitab4.5_0023521g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 5.6e-07 58.5 28 92.9
Oeu012768.1 Olea europaea HOM05D007952 ORTHO05D009823 5.6e-07 58.5 36 77.8
Gohir.D01G134240 Gossypium hirsutum HOM05D001966 ORTHO05D010127 9.5e-07 57.8 32 84.4
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 9.5e-07 57.8 32 84.4
Cpa.g.sc120.41 Carica papaya HOM05D001966 ORTHO05D010127 1.2e-06 57.4 31 83.9
Nitab4.5_0012234g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.2e-06 57.4 33 75.8
PGSC0003DMG400013043 Solanum tuberosum HOM05D034867 ORTHO05D030679 1.6e-06 57.0 40 75.0
FAN13G2309 Fragaria x ananassa HOM05D001070 ORTHO05D002096 2.1e-06 56.6 30 86.7
Gohir.1Z049792 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.1e-06 56.6 27 96.3
Oeu059001.1 Olea europaea HOM05D000540 ORTHO05D000681 2.1e-06 56.6 39 76.9
arahy.Tifrunner.gnm1.ann1.71HDHZ Arachis hypogaea HOM05D001966 ORTHO05D010127 2.8e-06 56.2 30 86.7
Gohir.A06G123204 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.8e-06 56.2 31 87.1
Nitab4.5_0007400g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010127 2.8e-06 56.2 39 74.4
Oeu015126.1 Olea europaea HOM05D001070 ORTHO05D002096 3.6e-06 55.8 31 80.6


User provided reference genes

Program Settings