Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00000g02011 Petunia axillaris HOM05D000436 ORTHO05D306698 2.5e-59 231.9 115 100.0
CANSAT35G0644 Cannabis sativa HOM05D000436 ORTHO05D001944 3.0e-12 75.5 117 37.6
Cfa017309 Carpinus fangiana HOM05D000436 ORTHO05D001944 8.8e-12 73.9 122 36.9
Cc06_g02150 Coffea canephora HOM05D000436 ORTHO05D001944 8.8e-12 73.9 124 40.3
Haze_20873 Corylus avellana HOM05D000436 ORTHO05D001944 1.5e-11 73.2 117 38.5
Lj2C87T10 Lonicera japonica HOM05D000436 ORTHO05D001944 1.5e-11 73.2 118 39.0
Nitab4.5_0011665g0010 Nicotiana tabacum HOM05D000436 ORTHO05D001944 1.5e-11 73.2 122 41.0
Nitab4.5_0000362g0090 Nicotiana tabacum HOM05D000436 ORTHO05D001944 2.0e-11 72.8 120 40.0
Atru.chr8.2079 Acer truncatum HOM05D000436 ORTHO05D001944 3.3e-11 72.0 117 38.5
Peaxi162Scf00318g00024 Petunia axillaris HOM05D000436 ORTHO05D001944 3.3e-11 72.0 134 38.8
TWI74G1143 Tripterygium wilfordii HOM05D000436 ORTHO05D001944 3.3e-11 72.0 117 35.9
Thecc.05G030400 Theobroma cacao HOM05D000436 ORTHO05D001944 7.4e-11 70.9 125 34.4
Migut.J00272 Erythranthe guttata HOM05D000436 ORTHO05D001944 9.7e-11 70.5 125 37.6
Solyc09g011350.3 Solanum lycopersicum HOM05D000436 ORTHO05D001944 1.3e-10 70.1 118 39.8
Sopen09g006070 Solanum pennellii HOM05D000436 ORTHO05D001944 1.3e-10 70.1 118 39.8
PGSC0003DMG400024262 Solanum tuberosum HOM05D000436 ORTHO05D001944 1.3e-10 70.1 118 39.8
CsaV3_4G025490 Cucumis sativus L. HOM05D000436 ORTHO05D001944 1.7e-10 69.7 117 38.5
Duzib093G0023 Durio zibethinus HOM05D000436 ORTHO05D001944 2.8e-10 68.9 117 35.0
Cpa.g.sc56.51 Carica papaya HOM05D000436 ORTHO05D001944 3.7e-10 68.6 118 37.3
COL.COLO4_14712 Corchorus olitorius HOM05D000436 ORTHO05D001944 3.7e-10 68.6 117 35.0
Gohir.D09G148800 Gossypium hirsutum HOM05D000436 ORTHO05D001944 4.8e-10 68.2 117 34.2
Gorai.006G169800 Gossypium raimondii HOM05D000436 ORTHO05D001944 4.8e-10 68.2 117 34.2
Gohir.A09G153000 Gossypium hirsutum HOM05D000436 ORTHO05D001944 6.3e-10 67.8 117 34.2
Oeu053777.1 Olea europaea HOM05D000436 ORTHO05D001944 6.3e-10 67.8 122 38.5
MELO3C003172.2 Cucumis melo HOM05D000436 ORTHO05D001944 8.2e-10 67.4 117 37.6
ClCG04G007730 Citrullus lanatus HOM05D000436 ORTHO05D001944 1.1e-09 67.0 117 37.6
Sabra06G0069300 Salix brachista HOM05D000436 ORTHO05D001944 1.4e-09 66.6 116 34.5
CiPaw.09G200300 Carya illinoinensis HOM05D000436 ORTHO05D001944 1.8e-09 66.2 119 36.1
Actinidia29174 Actinidia chinensis HOM05D000436 ORTHO05D001944 4.1e-09 65.1 125 39.2
FAN05G2034 Fragaria x ananassa HOM05D000436 ORTHO05D001944 4.1e-09 65.1 123 36.6
Rhsim05G0197100 Rhododendron simsii HOM05D000436 ORTHO05D001944 4.1e-09 65.1 124 36.3
Sc01g0004730 Simmondsia chinensis HOM05D000436 ORTHO05D001944 4.1e-09 65.1 121 33.9
Sed0022596 Sechium edule HOM05D000436 ORTHO05D001944 6.9e-09 64.3 118 35.6
arahy.Tifrunner.gnm1.ann1.D22HAB Arachis hypogaea HOM05D000436 ORTHO05D001944 9.1e-09 63.9 126 34.1
arahy.Tifrunner.gnm1.ann1.WYXM7K Arachis hypogaea HOM05D000436 ORTHO05D001944 9.1e-09 63.9 126 34.1
Ca_26603_v3 Cicer arietinum L. HOM05D000012 ORTHO05D007895 9.1e-09 63.9 121 36.4
FAN14G5121 Fragaria x ananassa HOM05D000436 ORTHO05D001944 9.1e-09 63.9 147 32.7
PGR031G2276 Punica granatum HOM05D000436 ORTHO05D001944 9.1e-09 63.9 111 34.2
SEGI_29892 Sequoiadendron giganteum HOM05D000436 ORTHO05D001944 9.1e-09 63.9 117 37.6
Dinv37127 Davidia involucrata HOM05D000436 ORTHO05D001944 1.2e-08 63.5 124 36.3
Glyma.18G189100 Glycine max HOM05D000436 ORTHO05D001944 1.2e-08 63.5 119 33.6
Hma1.2p1_1498F.1_g287150 Hydrangea macrophylla HOM05D000436 ORTHO05D001944 1.2e-08 63.5 124 34.7
Manes.08G086100 Manihot esculenta HOM05D000436 ORTHO05D001944 1.2e-08 63.5 117 32.5
Sed0015892 Sechium edule HOM05D000436 ORTHO05D001944 1.2e-08 63.5 119 35.3
BcaB02g07070 Brassica carinata HOM05D000436 ORTHO05D001944 1.5e-08 63.2 109 35.8
Duzib106G2012 Durio zibethinus HOM05D000436 ORTHO05D001944 1.5e-08 63.2 117 32.5
Glyma.07G138800 Glycine max HOM05D000436 ORTHO05D001944 1.5e-08 63.2 119 33.6
Phvul.008G114500 Phaseolus vulgaris HOM05D000436 ORTHO05D001944 2.0e-08 62.8 116 35.3
VMungo1383G0785 Vigna mungo HOM05D000436 ORTHO05D001944 2.0e-08 62.8 116 34.5
AUR62036864 Chenopodium quinoa HOM05D000436 ORTHO05D001944 2.6e-08 62.4 115 33.0
DCAR_028777 Daucus carota HOM05D000436 ORTHO05D001944 2.6e-08 62.4 122 35.2
Potri.006G091700 Populus trichocarpa HOM05D000436 ORTHO05D001944 2.6e-08 62.4 118 33.1
TPR.G27948 Trifolium pratense HOM05D000436 ORTHO05D001944 2.6e-08 62.4 121 34.7
Medtr7g064810 Medicago truncatula HOM05D000436 ORTHO05D001944 3.4e-08 62.0 118 35.6
unitig_26.g9111 Utricularia gibba HOM05D000436 ORTHO05D001944 3.4e-08 62.0 116 34.5
FAN09G0948 Fragaria x ananassa HOM05D000436 ORTHO05D001944 4.5e-08 61.6 128 33.6
Actinidia13823 Actinidia chinensis HOM05D000436 ORTHO05D001944 7.7e-08 60.8 121 35.5
Aa31sc88G90 Aethionema arabicum HOM05D000436 ORTHO05D001944 7.7e-08 60.8 120 36.7
FvH4_6g12850 Fragaria vesca HOM05D000436 ORTHO05D001944 7.7e-08 60.8 123 35.0
Lalb_Chr03g0042621 Lupinus albus HOM05D000436 ORTHO05D001944 7.7e-08 60.8 123 33.3
RcHm_v2.0_Chr3g0464851 Rosa chinensis HOM05D000436 ORTHO05D001944 1.0e-07 60.5 124 34.7
Aqoxy1G00813 Aquilegia oxysepala HOM05D000436 ORTHO05D001944 1.3e-07 60.1 117 32.5
CAN.G229.36 Capsicum annuum HOM05D000436 ORTHO05D001944 1.3e-07 60.1 128 36.7
A04p29010 Brassica napus HOM05D000436 ORTHO05D001944 1.7e-07 59.7 118 36.4
BraA04t18374Z Brassica rapa HOM05D000436 ORTHO05D001944 1.7e-07 59.7 118 36.4
Carub.0004s1979 Capsella rubella HOM05D000436 ORTHO05D001944 1.7e-07 59.7 121 35.5
Psat3g132920 Pisum sativum HOM05D000436 ORTHO05D001944 1.7e-07 59.7 121 33.9
A07p28420 Brassica napus HOM05D000436 ORTHO05D001944 2.2e-07 59.3 109 34.9
BraA07t30479Z Brassica rapa HOM05D000436 ORTHO05D001944 2.2e-07 59.3 109 34.9
CARHR070170 Cardamine hirsuta HOM05D000436 ORTHO05D001944 2.2e-07 59.3 109 34.9
Nn2g11274 Nelumbo nucifera HOM05D000436 ORTHO05D001944 2.2e-07 59.3 115 32.2
Sp4g20190 Schrenkiella parvula HOM05D000436 ORTHO05D001944 2.2e-07 59.3 118 36.4
MSTRG.24891 Avicennia marina HOM05D000436 ORTHO05D001944 2.9e-07 58.9 122 32.0
C04p66250 Brassica napus HOM05D000436 ORTHO05D001944 2.9e-07 58.9 118 36.4
BolC4t28129H Brassica oleracea HOM05D000436 ORTHO05D001944 2.9e-07 58.9 118 36.4
Prupe.6G263600 Prunus persica HOM05D000436 ORTHO05D001944 2.9e-07 58.9 122 35.2
Ah.12g056300 Amaranthus hybridus HOM05D000436 ORTHO05D001944 3.8e-07 58.5 115 33.0
EL10Ac5g11595 Beta vulgaris HOM05D000436 ORTHO05D001944 3.8e-07 58.5 125 32.8
C03p24560 Brassica napus HOM05D000436 ORTHO05D001944 3.8e-07 58.5 114 34.2
Thhalv10017650m.g Eutrema salsugineum HOM05D000436 ORTHO05D001944 3.8e-07 58.5 118 36.4
BcaC08g45517 Brassica carinata HOM05D000436 ORTHO05D001944 5.0e-07 58.2 109 33.9
C06p31880 Brassica napus HOM05D000436 ORTHO05D001944 5.0e-07 58.2 109 33.9
BolC6t38314H Brassica oleracea HOM05D000436 ORTHO05D001944 5.0e-07 58.2 109 33.9
Ciclev10013699m.g Citrus clementina HOM05D000436 ORTHO05D001944 5.0e-07 58.2 126 35.7
Duzib116G0509 Durio zibethinus HOM05D000436 ORTHO05D001944 5.0e-07 58.2 119 32.8
Lj1g0017947 Lotus japonicus HOM05D000436 ORTHO05D001944 5.0e-07 58.2 116 33.6
THA.LOC104805624 Tarenaya hassleriana HOM05D000436 ORTHO05D001944 6.5e-07 57.8 117 35.9
COL.COLO4_12267 Corchorus olitorius HOM05D000436 ORTHO05D001944 8.5e-07 57.4 126 32.5
CARHR132430 Cardamine hirsuta HOM05D000436 ORTHO05D001944 1.1e-06 57.0 121 34.7
MD04G1137600 Malus domestica HOM05D000436 ORTHO05D001944 1.4e-06 56.6 124 33.1
Potri.002G002000 Populus trichocarpa HOM05D000436 ORTHO05D001944 1.4e-06 56.6 123 34.1
PGR083G2109 Punica granatum HOM05D000436 ORTHO05D001944 1.4e-06 56.6 121 33.1
AL4G34820 Arabidopsis lyrata HOM05D000436 ORTHO05D001944 1.9e-06 56.2 121 34.7
AT2G37880 Arabidopsis thaliana HOM05D000436 ORTHO05D001944 1.9e-06 56.2 121 34.7
CAN.G905.2 Capsicum annuum HOM05D000436 ORTHO05D001944 1.9e-06 56.2 121 33.9
QL07p028539 Quercus lobata HOM05D000436 ORTHO05D001944 1.9e-06 56.2 101 36.6
HanXRQChr04g0124551 Helianthus annuus HOM05D000436 ORTHO05D001944 2.5e-06 55.8 130 36.2
SGA_v2.0_scaffold85G26821 Striga asiatica HOM05D000436 ORTHO05D001944 2.5e-06 55.8 118 33.1
THA.LOC104813723 Tarenaya hassleriana HOM05D000436 ORTHO05D001944 2.5e-06 55.8 113 34.5
TAR381G0405 Trochodendron aralioides HOM05D000436 ORTHO05D001944 3.2e-06 55.5 122 32.8
AT1G21050 Arabidopsis thaliana HOM05D000436 ORTHO05D001944 4.2e-06 55.1 115 33.0
BcaB01g03748 Brassica carinata HOM05D000436 ORTHO05D001944 4.2e-06 55.1 118 34.7
AL1G34090 Arabidopsis lyrata HOM05D000436 ORTHO05D001944 5.5e-06 54.7 115 33.0
Carub.0001s2050 Capsella rubella HOM05D000436 ORTHO05D001944 5.5e-06 54.7 115 33.0
Nn6g31567 Nelumbo nucifera HOM05D000436 ORTHO05D001944 5.5e-06 54.7 118 32.2
ATR0559G134 Amborella trichopoda HOM05D000436 ORTHO05D031073 7.2e-06 54.3 116 32.8
CARHR021490 Cardamine hirsuta HOM05D000436 ORTHO05D001944 7.2e-06 54.3 116 32.8
Aa31sc78G20 Aethionema arabicum HOM05D000436 ORTHO05D001944 9.4e-06 53.9 96 35.4
Aqoxy5G00939 Aquilegia oxysepala HOM05D000436 ORTHO05D001944 9.4e-06 53.9 116 31.9
Migut.C00334 Erythranthe guttata HOM05D000436 ORTHO05D001944 9.4e-06 53.9 118 32.2
Potri.005G259300 Populus trichocarpa HOM05D000436 ORTHO05D001944 9.4e-06 53.9 121 31.4


User provided reference genes

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