Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-212 742.7 377 100.0
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 7.0e-175 617.5 335 93.4
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 3.2e-172 608.6 347 88.2
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 6.3e-160 567.8 354 81.1
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-159 567.0 355 80.6
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 4.0e-146 521.9 337 76.0
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 6.4e-144 514.6 342 74.0
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 7.0e-143 511.1 357 71.1
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 2.3e-141 506.1 360 70.0
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 5.4e-135 485.0 334 69.5
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.1e-134 483.0 336 69.0
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.7e-133 479.9 335 69.9
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.6e-126 456.8 325 70.2
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 3.9e-125 452.2 335 67.5
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-124 450.7 333 64.6
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 9.6e-124 447.6 333 65.5
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-123 446.8 339 65.2
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 1.5e-121 440.3 334 66.2
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 9.9e-113 411.0 342 60.5
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-110 402.9 334 58.1
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 7.9e-110 401.4 329 59.3
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 4.3e-100 369.0 265 66.8
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 1.5e-97 360.5 216 86.6
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 6.3e-91 338.6 334 53.6
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.8e-90 337.0 328 53.7
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 2.4e-90 336.7 338 51.2
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 9.0e-90 334.7 344 51.5
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 2.0e-89 333.6 329 55.3
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 2.6e-89 333.2 329 52.6
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 2.6e-89 333.2 329 51.7
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.6e-89 333.2 328 52.4
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 3.4e-89 332.8 329 53.8
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 4.5e-89 332.4 329 52.9
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.0e-88 331.3 329 53.2
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.3e-88 330.9 324 53.1
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.7e-88 330.5 338 50.6
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 2.9e-88 329.7 338 51.5
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 3.8e-88 329.3 324 52.8
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 5.0e-88 328.9 328 51.8
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 8.5e-88 328.2 324 53.4
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 8.5e-88 328.2 329 51.7
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.1e-87 327.8 329 53.2
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 1.9e-87 327.0 334 52.7
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.5e-87 326.6 324 53.1
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 2.5e-87 326.6 328 51.2
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.5e-87 326.6 328 52.1
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 3.2e-87 326.2 329 52.0
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 4.2e-87 325.9 324 53.7
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 5.5e-87 325.5 329 51.7
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 9.3e-87 324.7 329 52.3
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 9.3e-87 324.7 328 52.1
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 9.3e-87 324.7 329 52.6
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.2e-86 324.3 334 50.0
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 1.2e-86 324.3 328 52.1
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 1.2e-86 324.3 328 51.8
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 1.2e-86 324.3 330 52.1
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 1.6e-86 323.9 328 52.4
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.6e-86 323.9 329 50.5
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.6e-86 323.9 328 52.1
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 1.6e-86 323.9 328 51.2
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 1.6e-86 323.9 335 51.6
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.1e-86 323.6 328 52.4
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 2.1e-86 323.6 329 52.9
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.7e-86 323.2 329 52.6
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 2.7e-86 323.2 334 52.7
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 2.7e-86 323.2 334 52.7
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 2.7e-86 323.2 328 51.8
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 3.6e-86 322.8 334 52.7
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 4.6e-86 322.4 328 51.2
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 4.6e-86 322.4 331 51.4
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 4.6e-86 322.4 329 53.2
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 4.6e-86 322.4 328 52.1
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 7.9e-86 321.6 328 52.4
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 7.9e-86 321.6 328 52.4
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 7.9e-86 321.6 329 51.4
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 7.9e-86 321.6 328 50.6
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.0e-85 321.2 328 51.5
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.0e-85 321.2 328 50.6
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 1.3e-85 320.9 328 51.8
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.3e-85 320.9 329 51.7
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 1.3e-85 320.9 331 50.2
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 1.8e-85 320.5 328 52.1
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 3.0e-85 319.7 351 49.0
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 3.0e-85 319.7 329 52.6
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 3.0e-85 319.7 329 51.4
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 3.9e-85 319.3 329 52.3
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 1.1e-84 317.8 328 52.1
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 1.5e-84 317.4 329 51.1
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 1.5e-84 317.4 329 50.5
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 1.5e-84 317.4 329 50.5
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 1.5e-84 317.4 329 51.4
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 1.9e-84 317.0 329 50.2
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 2.5e-84 316.6 331 51.7
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 3.3e-84 316.2 334 51.2
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 5.7e-84 315.5 329 50.5
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 7.4e-84 315.1 316 51.3
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 1.3e-83 314.3 329 49.5
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.3e-83 314.3 329 49.5
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 1.3e-83 314.3 325 51.7
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 2.2e-83 313.5 329 50.5
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 2.8e-83 313.2 328 50.9
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 4.8e-83 312.4 344 48.8
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 6.3e-83 312.0 330 50.3
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 1.1e-82 311.2 328 49.4
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.1e-82 311.2 328 49.7
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 2.4e-82 310.1 329 50.2
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 6.9e-82 308.5 320 50.0
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 6.9e-82 308.5 329 51.1
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 1.5e-81 307.4 329 50.5
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 2.0e-81 307.0 329 50.5
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 2.0e-81 307.0 348 48.9
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.0e-80 304.7 369 46.6
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.3e-80 304.3 369 46.9
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 1.3e-80 304.3 329 48.9
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 2.9e-80 303.1 329 50.8
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 6.5e-80 302.0 347 47.3
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 8.5e-80 301.6 324 51.2
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 3.9e-77 292.7 337 47.5
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 2.6e-76 290.0 403 43.2
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 9.1e-74 281.6 329 48.0
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 4.5e-73 279.3 277 49.8
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 7.7e-73 278.5 328 47.9
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 1.6e-70 270.8 329 45.9
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 1.8e-69 267.3 343 44.9
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.3e-68 263.1 277 49.8
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 9.7e-68 261.5 269 53.2
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.4e-61 241.1 334 43.7
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 4.0e-61 239.6 196 59.2
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 3.3e-60 236.5 227 55.5
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 5.7e-60 235.7 352 40.6
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 4.8e-59 232.6 218 54.1
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 3.8e-56 223.0 181 58.0
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 1.6e-49 201.1 214 49.5
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 2.6e-44 183.7 236 44.9
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 2.6e-36 157.1 149 55.0
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 6.6e-32 142.5 98 69.4
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 8.6e-32 142.1 150 48.0
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 7.3e-31 139.0 179 43.6
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 2.3e-29 134.0 346 31.5
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.2e-28 131.7 159 49.1
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 9.8e-28 128.6 142 45.8
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 3.7e-27 126.7 369 30.6
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 7.8e-25 119.0 175 44.6
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 4.7e-22 109.8 135 45.9
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 3.4e-20 103.6 358 28.2
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 5.8e-20 102.8 105 48.6
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 6.4e-19 99.4 213 31.0
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 5.4e-18 96.3 119 45.4
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.0e-16 92.0 299 29.4
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.3e-15 86.7 358 26.5
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 3.1e-13 80.5 268 28.4
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 1.2e-12 78.6 154 33.8
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 2.6e-12 77.4 65 53.8
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 1.1e-10 72.0 314 26.8
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 5.4e-10 69.7 66 47.0
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.1e-09 67.8 66 48.5
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 1.0e-08 65.5 64 42.2
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 8.6e-08 62.4 43 67.4
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.1e-07 62.0 48 58.3
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 7.3e-07 59.3 86 41.9
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 1.6e-06 58.2 44 61.4
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 3.6e-06 57.0 52 48.1


User provided reference genes

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