Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 1.2e-80 303.1 149 100.0
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 9.8e-72 273.5 149 90.6
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 9.8e-72 273.5 149 90.6
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 9.8e-72 273.5 149 90.6
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 4.8e-71 271.2 149 89.9
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 1.3e-68 263.1 149 89.3
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 9.8e-64 246.9 149 83.9
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 6.6e-44 181.0 146 63.7
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 1.5e-43 179.9 103 86.4
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 2.5e-43 179.1 142 64.8
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 5.6e-43 177.9 146 63.7
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 7.3e-43 177.6 142 65.5
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 1.6e-42 176.4 142 66.2
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 2.8e-42 175.6 146 61.6
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 4.7e-42 174.9 142 65.5
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 1.1e-41 173.7 146 61.6
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 1.1e-41 173.7 142 64.8
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 1.4e-41 173.3 142 64.1
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 5.2e-41 171.4 147 63.9
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 5.2e-41 171.4 142 60.6
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 5.2e-41 171.4 148 64.9
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 1.5e-40 169.9 147 59.9
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 2.6e-40 169.1 145 59.3
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 4.4e-40 168.3 142 62.0
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 5.8e-40 167.9 143 61.5
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 9.9e-40 167.2 142 60.6
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 1.3e-39 166.8 146 60.3
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 2.2e-39 166.0 142 60.6
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 2.9e-39 165.6 146 60.3
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 6.4e-39 164.5 146 61.6
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 6.4e-39 164.5 143 59.4
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 8.3e-39 164.1 142 59.9
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 8.3e-39 164.1 143 60.8
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 1.1e-38 163.7 147 60.5
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 1.4e-38 163.3 142 62.7
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 2.4e-38 162.5 137 61.3
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 3.2e-38 162.2 148 58.8
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 3.2e-38 162.2 148 57.4
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 5.4e-38 161.4 141 57.4
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 5.4e-38 161.4 148 62.8
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 9.2e-38 160.6 147 55.1
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 9.2e-38 160.6 142 60.6
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 1.6e-37 159.8 145 57.9
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 1.6e-37 159.8 144 59.7
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 2.1e-37 159.5 146 57.5
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 2.7e-37 159.1 146 58.2
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 2.7e-37 159.1 147 59.2
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 4.6e-37 158.3 145 58.6
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 4.6e-37 158.3 148 62.2
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 4.6e-37 158.3 146 57.5
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 6.0e-37 157.9 145 57.2
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 1.0e-36 157.1 146 56.8
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 1.0e-36 157.1 146 56.8
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 1.3e-36 156.8 143 62.9
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 1.3e-36 156.8 143 57.3
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 1.7e-36 156.4 142 57.7
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 1.7e-36 156.4 146 55.5
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 3.0e-36 155.6 147 59.9
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 3.0e-36 155.6 145 59.3
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 3.9e-36 155.2 146 58.2
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 5.1e-36 154.8 146 56.8
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 5.1e-36 154.8 142 58.5
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 5.1e-36 154.8 142 58.5
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 6.6e-36 154.5 148 56.1
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 6.6e-36 154.5 146 58.2
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 6.6e-36 154.5 146 58.2
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 8.6e-36 154.1 145 55.2
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 1.1e-35 153.7 146 54.8
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 3.3e-35 152.1 144 58.3
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 4.3e-35 151.8 142 57.0
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 5.6e-35 151.4 146 56.8
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 1.6e-34 149.8 146 56.2
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 2.1e-34 149.4 146 54.1
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 2.8e-34 149.1 144 55.6
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 3.6e-34 148.7 144 56.2
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 3.6e-34 148.7 145 55.9
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 8.1e-34 147.5 144 54.9
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 8.1e-34 147.5 144 55.6
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 1.1e-33 147.1 146 54.1
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.4e-33 146.0 115 66.1
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 1.2e-32 143.7 144 53.5
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 1.5e-32 143.3 144 52.8
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 1.5e-32 143.3 149 53.0
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 3.4e-32 142.1 144 52.8
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 4.4e-32 141.7 142 53.5
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 5.8e-32 141.4 144 52.8
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 7.6e-32 141.0 144 53.5
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 9.9e-32 140.6 144 52.8
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 9.9e-32 140.6 144 54.9
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 1.3e-31 140.2 145 52.4
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 1.7e-31 139.8 145 52.4
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 2.9e-31 139.0 141 52.5
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 3.8e-31 138.7 127 58.3
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 3.8e-31 138.7 146 52.7
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 4.9e-31 138.3 180 47.2
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 8.4e-31 137.5 147 52.4
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 1.9e-30 136.3 225 40.4
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 7.1e-30 134.4 125 59.2
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 7.1e-30 134.4 144 49.3
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 7.8e-29 131.0 147 49.7
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 6.6e-28 127.9 102 65.7
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 4.0e-25 118.6 125 57.6
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 9.0e-25 117.5 122 54.1
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 5.8e-24 114.8 142 50.0
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 3.2e-22 109.0 103 56.3
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 9.3e-22 107.5 145 44.1
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 1.6e-21 106.7 147 43.5
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 1.6e-21 106.7 103 56.3
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 2.1e-21 106.3 103 54.4
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 2.1e-21 106.3 142 46.5
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 2.7e-21 105.9 103 54.4
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 4.6e-21 105.1 145 39.3
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 6.0e-21 104.8 103 54.4
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 7.8e-21 104.4 103 57.3
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 1.0e-20 104.0 149 42.3
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 2.3e-20 102.8 148 41.2
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 1.9e-19 99.8 144 43.8
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 1.9e-19 99.8 144 43.8
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 1.3e-18 97.1 141 42.6
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 2.1e-18 96.3 103 54.4
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 1.1e-17 94.0 74 63.5
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 1.8e-17 93.2 100 49.0
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 1.2e-16 90.5 67 68.7
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 1.5e-16 90.1 100 48.0
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 4.2e-14 82.0 91 49.5
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 1.4e-09 67.0 77 50.6
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 2.9e-07 59.3 133 35.3
ClCG11G015010 Citrullus lanatus HOM05D005768 ORTHO05D007100 1.4e-06 57.0 99 37.4


User provided reference genes

Program Settings