Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.0e-207 726.5 368 100.0
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 3.5e-203 711.4 368 97.8
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 9.6e-153 543.9 365 74.5
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 5.8e-150 534.6 365 73.4
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 9.3e-148 527.3 360 70.8
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 1.6e-147 526.6 360 71.1
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 2.7e-147 525.8 365 70.7
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 4.6e-147 525.0 367 70.6
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 4.6e-147 525.0 361 72.3
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 6.0e-147 524.6 367 69.5
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 7.8e-147 524.2 367 69.5
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.7e-146 523.1 367 69.2
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 3.9e-146 521.9 365 71.2
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 6.6e-146 521.2 368 70.4
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 7.3e-145 517.7 367 68.9
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 1.3e-144 516.9 367 68.9
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 2.1e-144 516.2 365 69.9
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 3.6e-144 515.4 365 69.9
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 5.3e-143 511.5 367 68.7
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 5.3e-143 511.5 365 68.2
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.2e-142 510.4 370 68.6
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.2e-142 510.4 370 68.6
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 1.5e-142 510.0 362 68.5
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 2.0e-142 509.6 367 67.3
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 2.6e-142 509.2 365 67.9
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 3.4e-142 508.8 367 68.4
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 4.5e-142 508.4 365 68.2
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 3.8e-141 505.4 365 68.2
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 8.4e-141 504.2 363 67.8
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 2.4e-140 502.7 366 67.8
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 2.4e-140 502.7 354 70.1
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 3.2e-140 502.3 366 69.4
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 4.2e-140 501.9 354 70.3
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 5.4e-140 501.5 368 67.4
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 5.4e-140 501.5 360 68.1
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 3.0e-138 495.7 368 66.8
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 3.9e-138 495.4 365 67.4
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 6.7e-138 494.6 355 69.0
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 6.7e-138 494.6 362 67.4
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 5.6e-137 491.5 362 68.0
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 7.4e-137 491.1 364 65.9
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 2.1e-136 489.6 368 66.6
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 3.7e-136 488.8 359 68.2
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 4.0e-135 485.3 365 66.0
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 5.3e-135 485.0 362 65.5
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 2.0e-134 483.0 357 65.5
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 2.6e-134 482.6 368 67.1
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 3.4e-134 482.3 362 65.7
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 3.4e-134 482.3 355 66.2
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 4.5e-134 481.9 359 66.9
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 4.5e-134 481.9 361 66.5
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 4.5e-134 481.9 368 65.5
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 5.8e-134 481.5 375 65.3
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 9.9e-134 480.7 362 65.7
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 9.9e-134 480.7 362 65.2
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 3.8e-133 478.8 377 65.5
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 4.9e-133 478.4 365 65.5
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 4.9e-133 478.4 364 66.5
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 1.4e-132 476.9 365 66.0
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.9e-132 476.5 362 64.9
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.4e-132 476.1 366 65.8
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 3.2e-132 475.7 348 70.1
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 5.5e-132 474.9 362 64.9
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 5.5e-132 474.9 362 64.9
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 5.5e-132 474.9 355 65.9
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 7.1e-132 474.6 357 67.8
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 9.3e-132 474.2 362 66.0
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 9.3e-132 474.2 362 65.5
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.2e-131 473.8 365 65.2
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 2.7e-131 472.6 374 64.4
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 3.5e-131 472.2 359 65.7
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 3.5e-131 472.2 359 64.3
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 6.0e-131 471.5 350 67.1
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 7.9e-131 471.1 338 68.6
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 7.9e-131 471.1 366 64.5
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 3.0e-130 469.2 338 71.3
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 8.7e-130 467.6 366 65.8
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.1e-129 467.2 358 63.7
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 1.1e-129 467.2 362 64.1
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 4.3e-129 465.3 359 66.0
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 4.3e-129 465.3 366 64.8
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.1e-128 463.0 330 69.4
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 8.2e-128 461.1 364 64.0
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.1e-127 460.7 362 63.3
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.4e-127 460.3 366 62.3
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.8e-127 459.9 339 68.7
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 5.3e-127 458.4 366 63.9
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 5.8e-126 454.9 364 62.4
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 2.2e-125 453.0 337 66.8
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 8.4e-125 451.1 365 62.5
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.9e-124 449.9 366 62.0
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 2.5e-124 449.5 370 61.6
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 5.5e-124 448.4 361 60.4
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 2.7e-123 446.0 440 53.6
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 1.3e-122 443.7 327 67.0
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 3.7e-120 435.6 314 68.5
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 4.8e-120 435.3 408 58.3
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 1.8e-119 433.3 316 68.4
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.3e-117 427.2 428 53.0
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 5.9e-110 401.7 366 56.8
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 8.5e-109 397.9 286 70.3
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 5.5e-108 395.2 288 67.0
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 1.2e-107 394.0 288 67.7
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 7.4e-105 384.8 275 69.5
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.8e-103 380.2 304 65.1
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 4.1e-103 379.0 278 69.1
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 4.1e-103 379.0 314 60.8
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 5.3e-103 378.6 363 54.3
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 3.0e-98 362.8 352 55.1
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.3e-96 357.5 268 68.3
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 2.6e-94 349.7 335 56.4
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 8.0e-91 338.2 358 49.2
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 9.7e-89 331.3 269 63.9
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 1.3e-88 330.9 260 64.2
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 5.7e-81 305.4 311 52.1
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 6.1e-75 285.4 452 38.9
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 2.7e-62 243.4 356 41.9
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 4.6e-62 242.7 360 44.2
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 1.5e-52 211.1 176 64.8
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 3.4e-49 199.9 245 49.4
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-47 194.1 242 50.0
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 4.1e-47 193.0 360 35.8
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-44 184.9 211 51.2
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 7.3e-44 182.2 181 58.0
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.4e-42 177.2 181 56.4
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.1e-36 158.3 243 44.4
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 1.6e-30 137.9 115 61.7
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 7.1e-23 112.5 116 52.6
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 2.1e-19 100.9 204 34.3
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 1.1e-18 98.6 62 71.0
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 2.2e-16 90.9 73 56.2
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 1.1e-12 78.6 208 27.9
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 5.6e-12 76.3 83 48.2
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.2e-09 68.6 90 43.3
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 1.9e-07 61.2 35 68.6


User provided reference genes

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