Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 2.4e-251 871.7 447 100.0
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 1.1e-248 862.8 447 98.9
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 4.0e-145 518.8 452 60.4
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 2.6e-144 516.2 450 57.8
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 6.4e-143 511.5 394 64.5
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 8.3e-143 511.1 439 59.9
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 3.9e-140 502.3 440 57.5
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.1e-140 501.9 453 58.7
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 1.5e-139 500.4 450 58.4
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.9e-139 500.0 449 58.4
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 4.3e-139 498.8 393 61.3
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.8e-138 496.1 453 58.1
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 3.6e-138 495.7 389 61.2
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 3.6e-138 495.7 438 58.2
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 8.1e-138 494.6 393 61.3
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.5e-136 490.3 386 63.7
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 2.0e-136 490.0 446 57.8
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 2.6e-136 489.6 458 57.4
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 4.4e-136 488.8 459 57.1
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 5.8e-136 488.4 394 62.4
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 9.9e-136 487.6 390 61.3
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 1.3e-135 487.3 390 61.3
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 1.7e-135 486.9 439 56.9
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 2.2e-135 486.5 436 57.3
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 2.9e-135 486.1 449 57.2
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 1.2e-133 480.7 457 54.9
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 1.7e-132 476.9 416 57.7
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 2.3e-132 476.5 389 58.4
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 1.5e-131 473.8 391 60.1
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 1.9e-131 473.4 392 60.2
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 1.2e-130 470.7 448 56.0
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 4.7e-130 468.8 423 59.1
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 8.1e-130 468.0 421 56.5
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 4.0e-129 465.7 434 55.8
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 9.0e-129 464.5 432 54.4
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 2.6e-128 463.0 432 54.4
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 3.4e-128 462.6 448 53.3
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 3.4e-128 462.6 432 54.4
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 3.4e-128 462.6 438 53.2
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 1.7e-127 460.3 397 59.2
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 1.1e-126 457.6 396 58.1
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 2.4e-126 456.4 393 58.0
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 2.5e-123 446.4 389 59.4
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 2.5e-123 446.4 450 54.4
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 3.3e-123 446.0 463 52.1
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 4.8e-122 442.2 454 51.1
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 1.7e-119 433.7 384 57.6
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 2.9e-119 433.0 445 54.2
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 6.4e-119 431.8 445 50.3
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 5.4e-118 428.7 445 50.3
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 1.2e-117 427.6 470 50.0
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 1.0e-116 424.5 328 64.6
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 1.3e-116 424.1 385 58.7
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 1.3e-116 424.1 387 54.8
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 2.3e-116 423.3 397 55.2
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 5.1e-116 422.2 398 56.5
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 8.7e-116 421.4 392 55.6
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 2.5e-115 419.9 392 55.6
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 5.6e-115 418.7 453 51.0
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 5.6e-115 418.7 394 55.6
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 7.4e-115 418.3 453 50.8
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 9.6e-115 417.9 434 50.0
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 1.3e-114 417.5 453 51.0
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 2.1e-114 416.8 453 50.8
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 2.1e-114 416.8 453 50.8
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 2.1e-114 416.8 429 50.6
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.1e-114 416.8 449 51.7
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 2.8e-114 416.4 452 50.4
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 2.8e-114 416.4 392 55.6
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.8e-114 416.4 449 51.7
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.8e-113 413.7 392 54.8
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 1.8e-113 413.7 398 53.5
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.8e-113 413.7 392 54.6
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 2.4e-113 413.3 389 54.2
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 3.1e-113 412.9 394 53.8
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 5.3e-113 412.1 451 50.1
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 6.9e-113 411.8 396 54.5
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 9.0e-113 411.4 343 57.4
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 2.0e-112 410.2 393 53.9
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 1.7e-111 407.1 391 54.2
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 2.2e-111 406.8 414 51.7
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 1.4e-110 404.1 394 53.3
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 1.4e-110 404.1 394 53.3
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.4e-110 404.1 423 52.5
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 2.5e-110 403.3 413 51.6
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 4.2e-110 402.5 395 52.9
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 9.3e-110 401.4 419 51.6
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 9.3e-110 401.4 445 46.3
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 6.0e-109 398.7 414 50.2
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 2.3e-108 396.7 392 53.8
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 1.1e-107 394.4 464 48.5
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 3.3e-107 392.9 395 54.4
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 4.3e-107 392.5 383 51.7
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 1.3e-106 391.0 394 50.0
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 3.7e-106 389.4 398 52.5
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 8.2e-106 388.3 397 52.4
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.1e-105 387.9 380 51.1
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 6.9e-105 385.2 344 55.2
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 2.9e-103 379.8 344 58.7
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 1.1e-99 367.9 415 49.6
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 1.1e-99 367.9 392 51.5
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 2.8e-98 363.2 394 50.0
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 1.1e-97 361.3 424 47.9
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.6e-96 356.7 426 47.9
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 2.7e-93 346.7 331 58.0
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 4.2e-86 322.8 335 51.9
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 7.4e-83 312.0 414 43.2
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 2.9e-79 300.1 254 60.6
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 1.5e-78 297.7 392 46.2
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 1.1e-75 288.1 227 64.3
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 7.4e-75 285.4 367 48.0
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 8.2e-74 282.0 332 49.1
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 4.2e-70 269.6 403 40.0
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 8.5e-63 245.4 403 38.7
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 8.5e-63 245.4 411 38.7
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.9e-62 244.2 391 38.9
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 3.0e-60 236.9 458 38.0
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 2.7e-56 223.8 166 60.2
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 5.9e-56 222.6 286 47.2
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 3.8e-55 219.9 205 52.7
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 2.8e-45 187.2 399 32.3
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 1.7e-23 114.8 108 54.6
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 2.5e-22 110.9 302 29.5
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 8.1e-21 105.9 289 30.4
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 7.6e-19 99.4 195 32.8
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 8.4e-18 95.9 168 35.7
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 2.7e-16 90.9 400 24.0
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 9.6e-14 82.4 74 52.7
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 2.4e-12 77.8 146 35.6
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 9.3e-09 65.9 83 48.2


User provided reference genes

Program Settings