Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 5.8e-212 740.7 401 100.0
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 3.9e-192 674.9 401 92.5
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 6.6e-139 498.0 404 67.1
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 4.4e-135 485.3 400 68.5
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 1.8e-128 463.4 404 67.1
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 9.8e-127 457.6 410 64.1
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 2.2e-126 456.4 405 65.4
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 1.9e-125 453.4 408 62.0
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 4.1e-125 452.2 406 64.8
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 4.1e-125 452.2 406 65.8
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 9.2e-125 451.1 401 61.8
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 9.2e-125 451.1 409 62.1
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 2.0e-124 449.9 411 60.8
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 4.6e-124 448.7 411 64.2
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.0e-123 447.6 410 60.2
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 6.6e-123 444.9 409 63.1
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 1.1e-122 444.1 411 63.0
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 3.3e-122 442.6 408 60.0
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 3.3e-122 442.6 423 60.5
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 4.3e-122 442.2 401 63.1
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 5.6e-122 441.8 402 63.9
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 7.3e-122 441.4 412 60.9
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 7.3e-122 441.4 409 63.1
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 9.5e-122 441.0 411 60.3
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 9.5e-122 441.0 403 63.3
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 1.2e-121 440.7 401 65.3
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 2.1e-121 439.9 402 63.9
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 2.8e-121 439.5 402 60.2
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 3.6e-121 439.1 403 61.3
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 2.3e-120 436.4 407 60.7
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 1.2e-119 434.1 417 60.2
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.0e-119 433.3 415 60.2
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 5.8e-119 431.8 405 59.3
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 7.5e-119 431.4 426 58.2
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 9.8e-119 431.0 415 60.5
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 1.3e-118 430.6 379 63.1
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 3.7e-118 429.1 422 58.5
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 3.7e-118 429.1 407 62.7
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 6.4e-118 428.3 415 60.0
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 6.4e-118 428.3 415 57.6
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 1.1e-117 427.6 369 63.1
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.1e-117 427.6 417 58.3
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 3.2e-117 426.0 411 59.4
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 3.2e-117 426.0 429 58.7
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 4.1e-117 425.6 359 65.2
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 5.4e-117 425.2 422 59.5
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 7.1e-117 424.9 413 58.4
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 9.2e-117 424.5 428 55.8
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.2e-116 424.1 406 62.1
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 1.6e-116 423.7 334 68.3
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 1.6e-116 423.7 421 57.2
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 2.1e-116 423.3 421 56.8
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 2.7e-116 422.9 402 59.2
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 3.5e-116 422.5 431 56.4
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 3.5e-116 422.5 403 58.6
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 3.5e-116 422.5 409 57.5
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 7.8e-116 421.4 410 61.0
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.3e-115 420.6 410 61.0
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.7e-115 420.2 421 57.7
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 3.9e-115 419.1 433 57.5
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 1.9e-114 416.8 402 59.0
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 2.5e-114 416.4 427 56.9
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 3.3e-114 416.0 435 56.8
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 4.3e-114 415.6 439 56.9
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.2e-113 414.1 407 61.7
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.6e-113 413.7 428 56.8
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 2.1e-113 413.3 436 55.5
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 2.8e-113 412.9 429 55.9
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.8e-113 412.9 428 56.8
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 3.6e-113 412.5 406 60.3
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 1.1e-112 411.0 374 62.6
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 1.1e-112 411.0 402 57.0
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 1.4e-112 410.6 402 57.5
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 2.3e-112 409.8 401 59.9
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.8e-112 408.3 425 56.7
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 8.9e-112 407.9 435 54.9
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 1.2e-111 407.5 432 54.6
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.2e-111 407.5 425 56.9
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 1.5e-111 407.1 439 55.1
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 2.6e-111 406.4 335 63.9
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 1.9e-109 400.2 408 55.9
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 2.4e-109 399.8 416 56.0
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 5.4e-109 398.7 427 54.8
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 7.8e-108 394.8 403 58.3
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 1.0e-107 394.4 522 49.6
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 2.5e-106 389.8 428 53.3
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 3.3e-106 389.4 428 53.7
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.1e-104 382.9 426 55.2
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 5.2e-104 382.1 429 52.9
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.5e-103 380.6 404 53.5
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.6e-103 379.8 426 55.2
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 3.4e-103 379.4 349 59.6
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 5.8e-103 378.6 426 54.9
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.3e-102 377.5 405 55.3
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 1.1e-101 374.4 425 52.2
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 7.1e-101 371.7 409 56.0
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 1.1e-96 357.8 336 57.7
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 1.8e-96 357.1 378 54.8
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 1.1e-90 337.8 313 61.3
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 2.8e-89 333.2 327 58.1
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 5.8e-87 325.5 355 53.2
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 6.4e-86 322.0 322 57.5
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 1.4e-77 294.3 269 57.6
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 2.7e-76 290.0 402 43.5
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 7.9e-76 288.5 411 44.0
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 7.9e-76 288.5 268 57.5
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 1.1e-69 268.1 317 53.9
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 3.2e-69 266.5 333 48.0
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 4.1e-64 249.6 300 49.0
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 1.4e-56 224.6 212 57.1
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 2.6e-55 220.3 376 38.3
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 6.7e-43 179.1 197 54.8
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 4.8e-41 172.9 143 65.0
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 7.0e-40 169.1 159 58.5
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.0e-30 138.7 88 78.4
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 2.6e-26 124.0 485 26.6
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.8e-24 117.9 312 28.5
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 3.4e-18 97.1 80 65.0
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 6.6e-14 82.8 75 68.0
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 5.2e-11 73.2 321 24.3
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 2.0e-10 71.2 52 57.7
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 4.4e-10 70.1 46 65.2
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 7.5e-10 69.3 46 63.0
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 2.9e-09 67.4 169 31.4
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 3.0e-06 57.4 122 34.4


User provided reference genes

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