Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3783 Papaver somniferum HOM05D006065 ORTHO05D007672 5.5e-82 307.8 177 100.0
PSO210G7571 Papaver somniferum HOM05D006065 ORTHO05D007672 1.5e-74 283.1 177 89.8
TAR629G3005 Trochodendron aralioides HOM05D006065 ORTHO05D007672 1.3e-27 127.1 143 51.7
Potri.014G083100 Populus trichocarpa HOM05D006065 ORTHO05D007672 5.3e-24 115.2 138 48.6
Dinv43807 Davidia involucrata HOM05D006065 ORTHO05D007672 6.9e-24 114.8 139 46.8
Dinv32472 Davidia involucrata HOM05D006065 ORTHO05D007672 1.7e-22 110.2 143 45.5
MBI18_g21561_MAGBIO Magnolia biondii HOM05D006065 ORTHO05D007672 3.8e-22 109.0 142 43.7
TAR374G1295 Trochodendron aralioides HOM05D006065 ORTHO05D007672 3.8e-22 109.0 142 45.8
Sabra14G0060500 Salix brachista HOM05D006065 ORTHO05D007672 6.5e-22 108.2 136 45.6
Atru.chr5.461 Acer truncatum HOM05D006065 ORTHO05D007672 1.1e-21 107.5 144 45.1
Actinidia20914 Actinidia chinensis HOM05D006065 ORTHO05D007672 3.2e-21 105.9 142 43.7
vmacro13279 Vaccinium macrocarpon HOM05D006065 ORTHO05D007672 4.2e-21 105.5 142 45.1
Manes.05G035300 Manihot esculenta HOM05D006065 ORTHO05D007672 1.6e-20 103.6 141 43.3
QL08p049008 Quercus lobata HOM05D006065 ORTHO05D007672 3.5e-20 102.4 139 43.2
Cfa003936 Carpinus fangiana HOM05D006065 ORTHO05D007672 4.6e-20 102.1 144 42.4
CiPaw.01G060100 Carya illinoinensis HOM05D006065 ORTHO05D007672 7.9e-20 101.3 142 43.0
Ciclev10022632m.g Citrus clementina HOM05D006065 ORTHO05D007672 1.8e-19 100.1 139 43.2
Manes.01G258100 Manihot esculenta HOM05D006065 ORTHO05D007672 1.8e-19 100.1 138 44.2
Hma1.2p1_0001F.1_g001420 Hydrangea macrophylla HOM05D006065 ORTHO05D007672 5.1e-19 98.6 147 43.5
Actinidia10016 Actinidia chinensis HOM05D006065 ORTHO05D007672 6.7e-19 98.2 142 43.7
DCAR_006926 Daucus carota HOM05D006065 ORTHO05D007672 6.7e-19 98.2 140 44.3
CiPaw.02G030100 Carya illinoinensis HOM05D006065 ORTHO05D007672 8.7e-19 97.8 134 47.0
Sabra02G0126300 Salix brachista HOM05D006065 ORTHO05D007672 1.5e-18 97.1 136 42.6
COL.COLO4_12704 Corchorus olitorius HOM05D006065 ORTHO05D007672 1.9e-18 96.7 143 39.9
Medtr7g076690 Medicago truncatula HOM05D006065 ORTHO05D007672 1.9e-18 96.7 143 41.3
Prupe.2G168300 Prunus persica HOM05D006065 ORTHO05D007672 2.5e-18 96.3 142 41.5
PGR031G0376 Punica granatum HOM05D006065 ORTHO05D007672 3.3e-18 95.9 142 38.0
Phvul.008G067900 Phaseolus vulgaris HOM05D006065 ORTHO05D007672 4.3e-18 95.5 143 39.9
ClCG05G001580 Citrullus lanatus HOM05D006065 ORTHO05D007672 5.7e-18 95.1 142 41.5
Hund16927 Selenicereus undatus HOM05D006065 ORTHO05D007672 5.7e-18 95.1 143 41.3
VMungo1383G0981 Vigna mungo HOM05D006065 ORTHO05D007672 5.7e-18 95.1 143 41.3
Glyma.18G230000 Glycine max HOM05D006065 ORTHO05D007672 1.3e-17 94.0 143 41.3
Aqoxy7G00322 Aquilegia oxysepala HOM05D006065 ORTHO05D007672 2.1e-17 93.2 137 41.6
Glyma.09G262200 Glycine max HOM05D006065 ORTHO05D007672 2.8e-17 92.8 143 41.3
Migut.N01441 Erythranthe guttata HOM05D006065 ORTHO05D007672 3.7e-17 92.4 143 38.5
Haze_15490 Corylus avellana HOM05D006065 ORTHO05D007672 4.8e-17 92.0 172 37.2
Lj1g0009386 Lotus japonicus HOM05D006065 ORTHO05D007672 4.8e-17 92.0 142 40.8
Lalb_Chr19g0127061 Lupinus albus HOM05D006065 ORTHO05D007672 4.8e-17 92.0 142 38.0
CANSAT56G3634 Cannabis sativa HOM05D006065 ORTHO05D007672 6.2e-17 91.7 139 39.6
Ca_07890_v3 Cicer arietinum L. HOM05D006065 ORTHO05D007672 1.4e-16 90.5 143 38.5
Cc02_g37900 Coffea canephora HOM05D006065 ORTHO05D007672 1.8e-16 90.1 133 43.6
Gohir.A08G131000 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.8e-16 90.1 143 37.1
Sc01g0003370 Simmondsia chinensis HOM05D006065 ORTHO05D007672 2.4e-16 89.7 142 38.7
Thecc.01G360200 Theobroma cacao HOM05D006065 ORTHO05D007672 2.4e-16 89.7 148 36.5
arahy.Tifrunner.gnm1.ann1.QD83TI Arachis hypogaea HOM05D006065 ORTHO05D007672 3.1e-16 89.4 143 37.8
Oeu010611.1 Olea europaea HOM05D006065 ORTHO05D007672 4.1e-16 89.0 144 38.9
CAN.G78.55 Capsicum annuum HOM05D006065 ORTHO05D007672 6.9e-16 88.2 142 36.6
TWI59G0879 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 6.9e-16 88.2 142 40.1
CDE06G0574 Ceratophyllum demersum HOM05D006065 ORTHO05D007672 9.0e-16 87.8 129 39.5
CsaV3_3G008970 Cucumis sativus L. HOM05D006065 ORTHO05D007672 9.0e-16 87.8 142 39.4
arahy.Tifrunner.gnm1.ann1.WJC6IK Arachis hypogaea HOM05D006065 ORTHO05D007672 1.5e-15 87.0 168 35.1
MSTRG.4858 Avicennia marina HOM05D006065 ORTHO05D007672 2.6e-15 86.3 142 38.7
GSVIVG01018349001 Vitis vinifera HOM05D006065 ORTHO05D007672 2.6e-15 86.3 132 36.4
MSTRG.28221 Avicennia marina HOM05D006065 ORTHO05D007672 3.4e-15 85.9 140 40.0
Gorai.004G158400 Gossypium raimondii HOM05D006065 ORTHO05D007672 4.5e-15 85.5 143 35.0
Sed0025321 Sechium edule HOM05D006065 ORTHO05D007672 1.3e-14 84.0 142 37.3
PGSC0003DMG400000036 Solanum tuberosum HOM05D006065 ORTHO05D007672 1.3e-14 84.0 142 35.9
Psat3g110920 Pisum sativum HOM05D006065 ORTHO05D007672 1.7e-14 83.6 143 37.8
Gohir.D08G152500 Gossypium hirsutum HOM05D006065 ORTHO05D007672 3.8e-14 82.4 143 34.3
TWI14G0791 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 3.8e-14 82.4 142 38.7
EL10Ac1g00426 Beta vulgaris HOM05D006065 ORTHO05D007672 5.0e-14 82.0 126 41.3
FvH4_7g14190 Fragaria vesca HOM05D006065 ORTHO05D007672 6.5e-14 81.6 136 38.2
Ah.05g180670 Amaranthus hybridus HOM05D006065 ORTHO05D007672 8.4e-14 81.3 132 35.6
SGA_v2.0_scaffold11G05664 Striga asiatica HOM05D006065 ORTHO05D007672 8.4e-14 81.3 141 37.6
FAN06G3847 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.1e-13 80.9 136 38.2
Sp6g00560 Schrenkiella parvula HOM05D006065 ORTHO05D007672 1.1e-13 80.9 148 35.1
Duzib133G1075 Durio zibethinus HOM05D006065 ORTHO05D007672 1.4e-13 80.5 144 34.7
FAN06G3027 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.4e-13 80.5 136 38.2
GSVIVG01026900001 Vitis vinifera HOM05D006065 ORTHO05D007672 1.4e-13 80.5 132 34.8
FAN10G0270 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.9e-13 80.1 136 38.2
Sed0021596 Sechium edule HOM05D006065 ORTHO05D007672 1.9e-13 80.1 139 39.6
TPR.G37820 Trifolium pratense HOM05D006065 ORTHO05D007672 1.9e-13 80.1 143 35.0
Cpa.g.sc18.247 Carica papaya HOM05D006065 ORTHO05D007672 2.5e-13 79.7 141 34.0
Duzib138G1923 Durio zibethinus HOM05D006065 ORTHO05D007672 2.5e-13 79.7 142 33.8
THA.LOC104817023 Tarenaya hassleriana HOM05D006065 ORTHO05D007672 2.5e-13 79.7 142 31.7
unitig_8.g3395 Utricularia gibba HOM05D006065 ORTHO05D007672 3.2e-13 79.3 140 39.3
Thhalv10029047m.g Eutrema salsugineum HOM05D006065 ORTHO05D007672 4.2e-13 79.0 143 32.2
MD07G1138600 Malus domestica HOM05D006065 ORTHO05D007672 4.2e-13 79.0 129 45.0
RcHm_v2.0_Chr1g0355101 Rosa chinensis HOM05D006065 ORTHO05D007672 4.2e-13 79.0 139 38.1
FAN01G0390 Fragaria x ananassa HOM05D006065 ORTHO05D007672 5.5e-13 78.6 136 38.2
HanXRQChr13g0426531 Helianthus annuus HOM05D006065 ORTHO05D007672 5.5e-13 78.6 139 35.3
FAN03G2883 Fragaria x ananassa HOM05D006065 ORTHO05D007672 7.2e-13 78.2 139 36.7
Lsat_1_v5_gn_7_4500 Lactuca sativa HOM05D006065 ORTHO05D007672 9.3e-13 77.8 141 36.9
Peaxi162Scf00020g00240 Petunia axillaris HOM05D006065 ORTHO05D007672 9.3e-13 77.8 139 33.1
Carub.0006s3674 Capsella rubella HOM05D006065 ORTHO05D007672 1.6e-12 77.0 146 30.8
Rhsim07G0016100 Rhododendron simsii HOM05D006065 ORTHO05D007672 2.1e-12 76.6 208 31.7
Sopen01g038320 Solanum pennellii HOM05D006065 ORTHO05D007672 2.7e-12 76.3 142 33.1
AT4G00525 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 3.5e-12 75.9 147 32.0
CSS0003041 Camellia sinensis var. sinensis HOM05D006065 ORTHO05D007672 4.6e-12 75.5 181 35.4
Nitab4.5_0001702g0100 Nicotiana tabacum HOM05D006065 ORTHO05D007672 4.6e-12 75.5 131 38.9
Gorai.007G098900 Gossypium raimondii HOM05D006065 ORTHO05D007672 7.9e-12 74.7 171 33.3
Aa31LG5G450 Aethionema arabicum HOM05D006065 ORTHO05D007672 3.0e-11 72.8 142 33.1
Nn1g01520 Nelumbo nucifera HOM05D006065 ORTHO05D007672 5.1e-11 72.0 96 46.9
Nitab4.5_0008002g0050 Nicotiana tabacum HOM05D006065 ORTHO05D007672 2.5e-10 69.7 134 32.8
SalBow3G2602 Salvia bowleyana HOM05D006065 ORTHO05D007672 2.5e-10 69.7 139 33.1
SGA_v2.0_scaffold43G16421 Striga asiatica HOM05D006065 ORTHO05D007672 2.5e-10 69.7 141 34.0
Eucgr.D02286 Eucalyptus grandis HOM05D006065 ORTHO05D007672 3.3e-10 69.3 131 35.9
PGSC0003DMG400021646 Solanum tuberosum HOM05D006065 ORTHO05D007672 5.7e-10 68.6 129 37.2
BcaC01g06870 Brassica carinata HOM05D006065 ORTHO05D007672 1.6e-09 67.0 144 29.9
BcaNung05355 Brassica carinata HOM05D006065 ORTHO05D007672 1.6e-09 67.0 144 29.9
A03p32140 Brassica napus HOM05D006065 ORTHO05D007672 1.6e-09 67.0 146 30.1
BolC3t16187H Brassica oleracea HOM05D006065 ORTHO05D007672 1.6e-09 67.0 144 29.9
BraA03t12384Z Brassica rapa HOM05D006065 ORTHO05D007672 1.6e-09 67.0 146 30.1
Solyc05g049940.3 Solanum lycopersicum HOM05D006065 ORTHO05D007672 6.3e-09 65.1 128 35.2
Nitab4.5_0005277g0010 Nicotiana tabacum HOM05D006065 ORTHO05D007672 1.1e-08 64.3 135 31.1
Sopen05g028300 Solanum pennellii HOM05D006065 ORTHO05D007672 1.1e-08 64.3 128 35.2
AL6G52950 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 3.1e-08 62.8 147 28.6
Oeu020560.2 Olea europaea HOM05D006065 ORTHO05D007672 6.9e-08 61.6 193 30.6
HPP92_008504 Vanilla planifolia HOM05D006065 ORTHO05D007672 9.0e-08 61.2 141 29.1
Gohir.A11G088300 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.2e-07 60.8 171 29.8
Gohir.D11G092600 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.2e-07 60.8 171 29.8
SEGI_06767 Sequoiadendron giganteum HOM05D006065 ORTHO05D007672 1.5e-07 60.5 134 30.6
CDE02G4271 Ceratophyllum demersum HOM05D000667 ORTHO05D009057 2.0e-07 60.1 68 38.2
Solyc01g094510.2 Solanum lycopersicum HOM05D006065 ORTHO05D007672 6.5e-06 55.1 113 35.4


User provided reference genes

Program Settings