Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 4.3e-50 201.1 103 100.0
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 3.4e-47 191.4 103 95.1
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 1.6e-33 146.0 99 76.8
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 4.7e-33 144.4 94 72.3
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 6.2e-33 144.1 101 71.3
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 6.2e-33 144.1 91 74.7
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.4e-32 142.9 92 77.2
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 1.4e-32 142.9 93 72.0
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 1.4e-32 142.9 91 75.8
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 1.8e-32 142.5 93 74.2
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 2.3e-32 142.1 91 73.6
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 3.1e-32 141.7 91 73.6
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 4.0e-32 141.4 91 74.7
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 4.0e-32 141.4 91 74.7
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 5.2e-32 141.0 93 73.1
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 6.8e-32 140.6 89 74.2
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 6.8e-32 140.6 92 71.7
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 6.8e-32 140.6 91 72.5
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 8.9e-32 140.2 89 74.2
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 8.9e-32 140.2 89 74.2
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 8.9e-32 140.2 99 68.7
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 1.2e-31 139.8 88 76.1
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 1.5e-31 139.4 91 72.5
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 1.5e-31 139.4 92 70.7
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.5e-31 139.4 102 69.6
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 1.5e-31 139.4 89 75.3
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 2.0e-31 139.0 89 75.3
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 2.0e-31 139.0 89 74.2
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.0e-31 139.0 87 74.7
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.0e-31 139.0 87 74.7
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 2.0e-31 139.0 89 74.2
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 2.6e-31 138.7 89 75.3
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 3.4e-31 138.3 89 76.4
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 3.4e-31 138.3 89 73.0
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 4.4e-31 137.9 93 72.0
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 4.4e-31 137.9 97 70.1
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 4.4e-31 137.9 90 73.3
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 4.4e-31 137.9 89 73.0
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 5.8e-31 137.5 87 74.7
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 5.8e-31 137.5 92 71.7
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 5.8e-31 137.5 91 71.4
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 7.5e-31 137.1 90 72.2
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 7.5e-31 137.1 88 75.0
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 7.5e-31 137.1 89 74.2
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 9.9e-31 136.7 91 71.4
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 9.9e-31 136.7 89 71.9
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.3e-30 136.3 101 66.3
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.3e-30 136.3 92 69.6
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 1.3e-30 136.3 100 67.0
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 1.3e-30 136.3 89 71.9
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.3e-30 136.3 89 71.9
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.3e-30 136.3 89 71.9
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.3e-30 136.3 89 71.9
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 1.3e-30 136.3 89 73.0
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 1.7e-30 136.0 93 71.0
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 1.7e-30 136.0 91 72.5
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 2.2e-30 135.6 91 70.3
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 2.2e-30 135.6 92 69.6
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 2.2e-30 135.6 89 71.9
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 2.9e-30 135.2 91 70.3
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.9e-30 134.4 89 71.9
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 4.9e-30 134.4 91 69.2
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 4.9e-30 134.4 89 71.9
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 6.4e-30 134.0 87 72.4
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 6.4e-30 134.0 89 71.9
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 6.4e-30 134.0 87 70.1
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 8.3e-30 133.7 87 75.9
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 8.3e-30 133.7 87 72.4
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.9e-29 132.5 100 63.0
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.9e-29 132.5 87 72.4
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 1.9e-29 132.5 101 66.3
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 9.2e-29 130.2 89 69.7
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 9.2e-29 130.2 89 67.4
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 2.1e-28 129.0 87 69.0
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 2.7e-28 128.6 90 66.7
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 3.5e-28 128.3 87 69.0
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 7.8e-28 127.1 83 71.1
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.7e-27 125.9 104 59.6
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 3.0e-27 125.2 89 67.4
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 6.6e-27 124.0 96 66.7
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 8.6e-27 123.6 110 56.4
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 2.5e-26 122.1 96 65.6
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 9.5e-26 120.2 106 60.4
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 1.1e-24 116.7 74 74.3
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.4e-24 116.3 75 74.7
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 5.2e-24 114.4 74 73.0
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 2.0e-23 112.5 72 73.6
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 2.0e-23 112.5 72 73.6
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 2.0e-23 112.5 85 65.9
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 5.8e-23 110.9 73 72.6
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 7.6e-23 110.5 77 67.5
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 4.9e-22 107.8 75 68.0
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 2.7e-20 102.1 94 53.2
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 7.8e-20 100.5 63 76.2
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 7.8e-20 100.5 87 55.2
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 1.5e-18 96.3 72 63.9
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 6.9e-16 87.4 89 56.2
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 1.5e-15 86.3 101 48.5
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 3.4e-15 85.1 86 45.3
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 4.9e-14 81.3 93 44.1
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 3.2e-13 78.6 80 48.8
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 4.2e-13 78.2 59 66.1
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 2.1e-12 75.9 82 45.1
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 6.0e-12 74.3 50 70.0
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.7e-11 72.8 45 73.3
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.7e-11 72.8 83 49.4
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 2.5e-10 68.9 48 66.7
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 3.3e-10 68.6 60 55.0
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 3.3e-10 68.6 60 55.0
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 3.3e-10 68.6 44 68.2
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 4.3e-10 68.2 60 55.0
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.5e-07 59.7 55 56.4


User provided reference genes

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