Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 9.7e-106 386.7 183 100.0
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 8.5e-102 373.6 183 95.6
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 9.4e-101 370.2 183 95.1
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 3.7e-89 331.6 183 86.9
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 8.3e-89 330.5 183 84.7
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 4.1e-88 328.2 183 85.2
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 9.5e-69 263.8 177 68.4
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 8.9e-67 257.3 177 66.1
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 8.9e-67 257.3 177 66.1
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-63 246.5 170 66.5
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-61 240.0 166 65.7
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 9.5e-61 237.3 166 65.1
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 7.3e-45 184.5 178 50.0
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 9.6e-45 184.1 178 50.6
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-40 169.5 166 50.0
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 1.3e-38 163.7 105 70.5
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-35 154.1 162 46.3
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.2e-31 140.6 177 42.4
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 4.6e-31 138.7 170 40.6
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 7.9e-31 137.9 166 41.0
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 8.7e-30 134.4 177 41.8
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 2.5e-29 132.9 165 41.8
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 2.5e-29 132.9 168 37.5
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 2.8e-28 129.4 172 38.4
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 3.7e-28 129.0 170 38.2
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 8.1e-28 127.9 165 37.6
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 1.1e-27 127.5 158 41.8
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 1.4e-27 127.1 164 39.0
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 1.4e-27 127.1 144 43.8
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 1.8e-27 126.7 144 41.0
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 2.4e-27 126.3 144 41.0
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 2.4e-27 126.3 144 41.0
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 3.1e-27 125.9 168 36.3
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 5.3e-27 125.2 169 35.5
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 6.9e-27 124.8 163 40.5
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 6.9e-27 124.8 167 37.7
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 9.0e-27 124.4 179 39.1
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 1.2e-26 124.0 169 34.3
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 1.5e-26 123.6 145 38.6
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 2.6e-26 122.9 159 34.6
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 2.6e-26 122.9 167 35.9
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 2.6e-26 122.9 144 42.4
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 3.4e-26 122.5 143 38.5
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 4.5e-26 122.1 166 33.7
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 4.5e-26 122.1 179 35.8
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 7.6e-26 121.3 160 37.5
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.9e-26 120.9 171 34.5
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.9e-26 120.9 171 34.5
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.7e-25 120.2 166 34.3
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 1.7e-25 120.2 168 35.1
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 2.2e-25 119.8 150 37.3
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 2.9e-25 119.4 166 34.9
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 2.9e-25 119.4 166 39.2
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 3.8e-25 119.0 164 34.8
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 3.8e-25 119.0 165 38.2
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.8e-25 119.0 160 36.9
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.8e-25 119.0 160 36.9
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 3.8e-25 119.0 167 36.5
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 4.9e-25 118.6 154 36.4
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 6.4e-25 118.2 167 34.1
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 6.4e-25 118.2 178 36.5
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 8.4e-25 117.9 149 37.6
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 8.4e-25 117.9 166 36.7
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 8.4e-25 117.9 153 39.9
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 1.1e-24 117.5 143 41.3
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 1.1e-24 117.5 166 37.3
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 1.4e-24 117.1 167 39.5
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 1.4e-24 117.1 176 35.8
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 2.4e-24 116.3 159 41.5
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.4e-24 116.3 168 34.5
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 2.4e-24 116.3 171 35.7
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 2.4e-24 116.3 166 38.6
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 2.4e-24 116.3 144 40.3
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 3.2e-24 115.9 166 37.3
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 3.2e-24 115.9 176 37.5
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.2e-24 115.9 168 34.5
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 3.2e-24 115.9 145 41.4
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 4.2e-24 115.5 153 39.2
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 4.2e-24 115.5 164 36.6
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 4.2e-24 115.5 167 37.1
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 3.5e-23 112.5 169 34.3
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 4.6e-23 112.1 166 35.5
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 6.0e-23 111.7 148 36.5
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 6.0e-23 111.7 180 33.3
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 7.9e-23 111.3 166 34.3
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.3e-22 110.5 166 38.0
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 1.8e-22 110.2 151 35.1
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 3.0e-22 109.4 163 38.0
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 3.0e-22 109.4 167 32.9
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 3.9e-22 109.0 144 34.7
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 5.1e-22 108.6 170 34.7
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 1.1e-21 107.5 168 33.3
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.1e-21 107.5 168 33.3
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 1.5e-21 107.1 144 36.8
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 1.9e-21 106.7 168 35.1
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 1.9e-21 106.7 168 35.7
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 1.9e-21 106.7 178 33.1
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.9e-21 106.7 169 32.5
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.9e-21 106.7 170 30.6
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 1.9e-21 106.7 166 34.3
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 2.5e-21 106.3 169 32.5
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 2.5e-21 106.3 169 33.7
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 3.3e-21 105.9 168 35.1
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 4.3e-21 105.5 144 42.4
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 5.6e-21 105.1 168 35.1
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 7.4e-21 104.8 183 30.6
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 9.6e-21 104.4 170 30.0
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.6e-21 104.4 170 30.0
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 1.3e-20 104.0 147 38.8
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 1.3e-20 104.0 176 36.9
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 1.6e-20 103.6 167 32.9
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 1.6e-20 103.6 166 36.1
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 2.8e-20 102.8 167 35.3
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 2.8e-20 102.8 168 33.9
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 2.8e-20 102.8 168 34.5
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 3.7e-20 102.4 168 33.9
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 6.2e-20 101.7 168 33.3
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 6.2e-20 101.7 162 34.0
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 9.0e-19 97.8 167 32.9
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.2e-18 97.4 147 35.4
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 2.0e-18 96.7 120 47.5
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 3.4e-18 95.9 147 35.4
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.5e-18 95.5 146 34.2
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 4.5e-18 95.5 168 33.3
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 4.5e-18 95.5 160 33.8
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 5.8e-18 95.1 148 31.1
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 2.2e-17 93.2 145 36.6
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 2.9e-17 92.8 149 32.9
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.9e-17 92.0 174 31.0
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 6.5e-17 91.7 165 32.7
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 1.9e-16 90.1 148 34.5
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.2e-16 89.0 212 27.8
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 3.5e-15 85.9 99 40.4
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 3.5e-15 85.9 148 33.1
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 1.0e-14 84.3 148 34.5
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 1.3e-14 84.0 115 35.7
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 1.3e-14 84.0 149 32.2
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 1.3e-14 84.0 99 40.4
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 2.3e-14 83.2 155 28.4
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 3.0e-14 82.8 182 30.8
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 1.1e-13 80.9 105 39.0
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 1.9e-13 80.1 101 40.6
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 3.3e-13 79.3 167 30.5
Os05g0386400 Oryza sativa ssp. japonica HOM05D003575 ORTHO05D003587 3.3e-13 79.3 184 28.8
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 1.6e-12 77.0 99 37.4
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 6.3e-12 75.1 140 31.4
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 1.2e-10 70.9 128 31.2
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 2.0e-10 70.1 146 28.8
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 2.6e-10 69.7 124 31.5
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 7.7e-10 68.2 112 30.4
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 7.7e-10 68.2 144 28.5
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 1.0e-09 67.8 117 34.2
Sabra18G0045200 Salix brachista HOM05D001613 ORTHO05D001556 8.5e-09 64.7 136 29.4
Oeu041110.1 Olea europaea HOM05D003575 ORTHO05D003587 3.2e-08 62.8 72 38.9
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 4.2e-08 62.4 103 28.2
GSVIVG01017001001 Vitis vinifera HOM05D001613 ORTHO05D001556 4.2e-08 62.4 142 31.7
AagrBONN_evm.TU.Sc2ySwM_344.2846 Anthoceros agrestis HOM05D045034 ORTHO05D003587 7.2e-08 61.6 130 27.7
Duzib192G0362 Durio zibethinus HOM05D001613 ORTHO05D001556 7.2e-08 61.6 155 26.5
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 1.6e-07 60.5 99 35.4
MBI15_g06462_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 2.1e-07 60.1 71 39.4
Prupe.3G060300 Prunus persica HOM05D001613 ORTHO05D001556 2.1e-07 60.1 156 26.9
QL02p071875 Quercus lobata HOM05D001613 ORTHO05D001556 2.7e-07 59.7 156 26.3
AUR62009238 Chenopodium quinoa HOM05D001613 ORTHO05D001556 3.6e-07 59.3 117 33.3
Prupe.1G445500 Prunus persica HOM05D001613 ORTHO05D001556 3.6e-07 59.3 143 28.7
AUR62041965 Chenopodium quinoa HOM05D001613 ORTHO05D001556 4.6e-07 58.9 117 32.5
MD09G1204600 Malus domestica HOM05D001613 ORTHO05D001556 7.9e-07 58.2 168 25.6
EL10Ac6g15056 Beta vulgaris HOM05D003575 ORTHO05D003587 1.0e-06 57.8 73 35.6
PGR044G2336 Punica granatum HOM05D001613 ORTHO05D001556 1.0e-06 57.8 143 27.3
Actinidia30285 Actinidia chinensis HOM05D001613 ORTHO05D001556 1.4e-06 57.4 143 26.6
EL10Ac9g22882 Beta vulgaris HOM05D003575 ORTHO05D003587 1.8e-06 57.0 73 35.6
Thecc.06G098600 Theobroma cacao HOM05D001613 ORTHO05D001556 1.8e-06 57.0 146 30.1
Dinv30443 Davidia involucrata HOM05D001613 ORTHO05D001556 2.3e-06 56.6 157 26.1
ATR0705G197 Amborella trichopoda HOM05D001613 ORTHO05D001556 3.0e-06 56.2 143 25.9
Sp1g13530 Schrenkiella parvula HOM05D001613 ORTHO05D001556 3.0e-06 56.2 143 26.6
C05p13340 Brassica napus HOM05D001613 ORTHO05D001556 3.9e-06 55.8 158 25.3
BolC5t30071H Brassica oleracea HOM05D001613 ORTHO05D001556 3.9e-06 55.8 158 25.3
Lalb_Chr25g0286161 Lupinus albus HOM05D001613 ORTHO05D001556 3.9e-06 55.8 169 24.3
AT1G15215 Arabidopsis thaliana HOM05D001613 ORTHO05D001556 5.1e-06 55.5 143 29.4
Hma1.2p1_0049F.1_g028400 Hydrangea macrophylla HOM05D001613 ORTHO05D001556 5.1e-06 55.5 142 27.5
SGA_v2.0_scaffold66G22536 Striga asiatica HOM05D001613 ORTHO05D008256 6.7e-06 55.1 126 27.8
MSTRG.22643 Avicennia marina HOM05D001613 ORTHO05D001556 8.8e-06 54.7 126 30.2


User provided reference genes

Program Settings