Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 1.4e-167 592.8 296 100.0
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 4.6e-166 587.8 296 99.0
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 9.1e-138 493.8 298 83.9
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 4.5e-137 491.5 292 84.2
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 7.7e-137 490.7 296 82.8
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 2.2e-136 489.2 274 88.7
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 2.7e-134 482.3 296 82.4
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 4.0e-133 478.4 296 81.8
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 6.3e-131 471.1 296 80.1
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 3.8e-128 461.8 275 84.4
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 1.5e-124 449.9 297 78.1
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 2.6e-124 449.1 291 78.4
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 4.4e-124 448.4 280 81.4
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 4.1e-122 441.8 290 77.2
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 7.0e-122 441.0 297 76.4
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 2.0e-121 439.5 302 75.8
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 2.7e-121 439.1 297 76.1
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 3.0e-120 435.6 297 74.4
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 8.6e-120 434.1 296 75.7
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 3.1e-117 425.6 293 74.4
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 4.0e-117 425.2 294 73.1
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 6.8e-117 424.5 291 75.3
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.5e-116 423.3 287 73.9
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 2.6e-116 422.5 297 74.1
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 3.4e-116 422.2 297 73.7
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 4.4e-116 421.8 275 78.2
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 2.2e-115 419.5 299 72.2
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 2.2e-115 419.5 299 72.6
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 4.9e-115 418.3 290 73.4
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 6.4e-115 417.9 297 72.7
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 6.4e-115 417.9 297 72.7
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 8.3e-115 417.5 297 73.4
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.1e-114 417.2 294 73.5
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.1e-114 417.2 294 73.5
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 1.4e-114 416.8 302 72.8
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 7.0e-114 414.5 304 72.4
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.2e-113 413.7 296 72.3
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 1.2e-113 413.7 303 70.3
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.2e-113 413.7 294 73.1
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 1.2e-113 413.7 294 72.4
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 1.6e-113 413.3 292 72.3
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.7e-113 412.5 290 74.1
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 6.0e-113 411.4 294 72.8
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 7.8e-113 411.0 298 71.5
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 1.0e-112 410.6 294 72.8
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.0e-112 410.6 294 72.8
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 3.0e-112 409.1 292 71.6
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 3.9e-112 408.7 296 72.0
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 3.9e-112 408.7 294 71.8
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 3.9e-112 408.7 290 72.4
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 6.6e-112 407.9 304 71.7
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 6.6e-112 407.9 296 71.3
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 6.6e-112 407.9 294 71.4
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 6.6e-112 407.9 294 71.1
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.1e-111 407.1 291 71.1
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.9e-111 406.4 294 71.4
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 2.5e-111 406.0 294 71.4
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 2.5e-111 406.0 287 71.4
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 2.5e-111 406.0 300 70.0
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 4.3e-111 405.2 292 71.6
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 4.3e-111 405.2 294 70.7
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 5.6e-111 404.8 295 70.5
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 7.3e-111 404.4 292 70.5
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 1.6e-110 403.3 295 72.2
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 2.8e-110 402.5 295 70.5
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 3.6e-110 402.1 294 70.4
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 3.6e-110 402.1 291 71.5
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 3.6e-110 402.1 303 69.3
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 3.6e-110 402.1 294 70.1
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 4.7e-110 401.7 294 70.4
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.7e-110 401.7 294 70.1
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 6.2e-110 401.4 294 70.1
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 6.2e-110 401.4 294 70.1
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 6.2e-110 401.4 294 70.1
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 6.2e-110 401.4 296 70.6
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 8.1e-110 401.0 293 70.6
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 1.1e-109 400.6 293 70.3
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 1.1e-109 400.6 294 70.4
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.8e-109 399.8 293 70.3
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 1.8e-109 399.8 293 70.3
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.1e-109 399.1 293 70.3
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 4.0e-109 398.7 293 70.3
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 4.0e-109 398.7 303 68.0
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 5.2e-109 398.3 299 68.9
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 5.2e-109 398.3 295 70.5
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 6.8e-109 397.9 293 69.6
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 8.9e-109 397.5 295 69.5
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 2.0e-108 396.4 295 70.2
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 2.0e-108 396.4 297 69.4
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 2.0e-108 396.4 292 72.3
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 2.6e-108 396.0 294 69.4
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.6e-108 396.0 294 69.4
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 3.4e-108 395.6 295 70.2
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 4.4e-108 395.2 295 70.8
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 4.4e-108 395.2 295 70.2
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 5.8e-108 394.8 295 70.2
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 5.8e-108 394.8 295 70.2
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 7.5e-108 394.4 293 68.9
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 7.5e-108 394.4 294 69.0
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 7.5e-108 394.4 302 69.2
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 9.8e-108 394.0 294 70.4
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 9.8e-108 394.0 289 70.6
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.3e-107 393.7 295 69.8
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 1.7e-107 393.3 298 69.8
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 2.9e-107 392.5 295 69.5
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 2.9e-107 392.5 278 73.0
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 2.9e-107 392.5 295 69.5
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 2.9e-107 392.5 295 69.5
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 3.7e-107 392.1 294 69.4
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 3.7e-107 392.1 302 70.2
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 8.3e-107 391.0 298 69.5
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 8.3e-107 391.0 296 67.2
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 8.3e-107 391.0 294 68.7
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 1.1e-106 390.6 278 72.7
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 2.4e-106 389.4 295 70.2
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 3.2e-106 389.0 307 65.5
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 3.2e-106 389.0 294 69.4
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 4.1e-106 388.7 278 71.9
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 7.1e-106 387.9 295 68.8
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 7.1e-106 387.9 293 69.3
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 2.1e-105 386.3 295 69.2
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 7.8e-105 384.4 302 64.9
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 5.1e-104 381.7 294 68.4
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 6.6e-104 381.3 288 68.1
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 6.6e-104 381.3 299 65.6
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 9.5e-103 377.5 298 69.1
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 2.1e-102 376.3 306 64.1
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 3.6e-102 375.6 283 68.9
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 3.6e-102 375.6 306 63.7
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 6.2e-102 374.8 297 67.3
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 6.2e-102 374.8 294 66.7
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 1.8e-101 373.2 300 68.7
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 4.0e-101 372.1 286 69.6
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 6.4e-99 364.8 287 65.2
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 3.2e-98 362.5 310 61.3
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 4.6e-97 358.6 295 64.1
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 4.3e-95 352.1 244 73.8
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 3.6e-94 349.0 296 63.9
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 2.9e-91 339.3 296 62.2
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 4.9e-91 338.6 297 61.6
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.9e-90 336.7 296 61.1
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 1.6e-86 323.6 296 59.1
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 2.1e-86 323.2 254 65.4
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 2.8e-86 322.8 295 61.0
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 4.0e-85 318.9 193 85.0
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 1.3e-75 287.3 271 56.8
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 4.3e-71 272.3 215 68.4
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 4.9e-67 258.8 283 51.6
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 5.5e-66 255.4 283 51.2
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 7.9e-65 251.5 276 51.8
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 2.5e-63 246.5 281 48.8
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 6.9e-61 238.4 271 52.4
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 1.6e-57 227.3 165 70.3
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 1.4e-53 214.2 138 76.1
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 3.0e-48 196.4 144 72.9
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 1.7e-46 190.7 150 64.7
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 6.9e-45 185.3 130 70.8
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 3.6e-25 119.8 103 60.2
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 8.0e-25 118.6 332 27.4
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 1.0e-24 118.2 114 57.0
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 1.3e-22 111.3 109 56.9
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 6.3e-22 109.0 83 68.7
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 4.5e-20 102.8 98 59.2
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 1.8e-13 80.9 74 56.8
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 5.6e-10 69.3 90 50.0
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 2.8e-09 67.0 72 52.8
Ciclev10032509m.g Citrus clementina HOM05D005748 ORTHO05D007123 5.7e-07 59.3 123 35.0
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 7.5e-07 58.9 130 33.1
PSO478G3396 Papaver somniferum HOM05D005748 ORTHO05D007123 2.2e-06 57.4 120 36.7
DCAR_021512 Daucus carota HOM05D005748 ORTHO05D007123 2.9e-06 57.0 130 32.3
CiPaw.06G069600 Carya illinoinensis HOM05D005748 ORTHO05D007123 3.7e-06 56.6 123 32.5
Ca_04590_v3 Cicer arietinum L. HOM05D005748 ORTHO05D007123 3.7e-06 56.6 151 30.5


User provided reference genes

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