Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 2.4e-72 275.4 140 100.0
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.3e-57 226.5 117 97.4
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 4.9e-57 224.6 117 96.6
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 6.4e-57 224.2 114 98.2
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 8.9e-51 203.8 115 89.6
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.4e-50 201.4 119 83.2
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.4e-50 201.4 119 83.2
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 5.8e-50 201.1 119 82.4
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 7.6e-50 200.7 119 82.4
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 7.6e-50 200.7 119 83.2
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 9.9e-50 200.3 113 86.7
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 9.9e-50 200.3 115 87.8
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 9.9e-50 200.3 115 87.8
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.3e-49 199.9 117 82.9
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.7e-49 199.5 119 82.4
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 2.2e-49 199.1 119 82.4
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 2.9e-49 198.7 120 81.7
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 2.9e-49 198.7 120 82.5
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 3.8e-49 198.4 114 85.1
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 4.9e-49 198.0 117 81.2
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 4.9e-49 198.0 117 82.9
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 4.9e-49 198.0 120 80.8
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 6.4e-49 197.6 120 80.8
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 8.4e-49 197.2 117 82.1
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 8.4e-49 197.2 117 79.5
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 8.4e-49 197.2 119 82.4
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.1e-48 196.8 114 84.2
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.4e-48 196.4 119 81.5
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 1.9e-48 196.1 118 80.5
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 1.9e-48 196.1 120 80.8
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 2.4e-48 195.7 119 80.7
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 2.4e-48 195.7 117 82.9
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 4.1e-48 194.9 118 81.4
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 4.1e-48 194.9 113 82.3
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 4.1e-48 194.9 117 80.3
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 5.4e-48 194.5 120 79.2
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 7.1e-48 194.1 117 79.5
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 9.2e-48 193.7 120 77.5
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 1.2e-47 193.4 119 77.3
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.2e-47 193.4 119 80.7
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.2e-47 193.4 117 80.3
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.6e-47 193.0 119 79.8
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.6e-47 193.0 120 80.0
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 1.6e-47 193.0 117 79.5
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 1.6e-47 193.0 120 79.2
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.6e-47 193.0 119 77.3
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 2.1e-47 192.6 120 78.3
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 2.1e-47 192.6 120 80.0
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 2.1e-47 192.6 116 81.0
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 2.7e-47 192.2 118 77.1
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 3.5e-47 191.8 116 80.2
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 3.5e-47 191.8 116 80.2
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 4.6e-47 191.4 120 76.7
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 4.6e-47 191.4 120 77.5
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 4.6e-47 191.4 117 78.6
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 4.6e-47 191.4 112 79.5
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 7.8e-47 190.7 117 77.8
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 7.8e-47 190.7 117 77.8
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 7.8e-47 190.7 117 77.8
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 7.8e-47 190.7 117 77.8
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 7.8e-47 190.7 117 77.8
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 7.8e-47 190.7 113 81.4
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 1.0e-46 190.3 120 75.8
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 1.0e-46 190.3 117 79.5
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.7e-46 189.5 116 79.3
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 1.7e-46 189.5 121 75.2
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.3e-46 189.1 121 77.7
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 3.0e-46 188.7 121 76.9
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 3.9e-46 188.3 119 73.1
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 3.9e-46 188.3 118 78.0
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 6.6e-46 187.6 116 78.4
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 8.6e-46 187.2 116 78.4
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 8.6e-46 187.2 121 75.2
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.5e-45 186.4 121 73.6
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 1.5e-45 186.4 120 75.0
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.5e-45 186.4 117 76.9
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.9e-45 186.0 117 76.1
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 1.9e-45 186.0 117 76.1
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.5e-45 185.7 119 75.6
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 2.5e-45 185.7 118 75.4
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 4.3e-45 184.9 124 75.8
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 5.6e-45 184.5 121 74.4
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 5.6e-45 184.5 117 73.5
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 7.3e-45 184.1 118 76.3
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 7.3e-45 184.1 131 71.8
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 1.2e-44 183.3 117 76.1
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 2.1e-44 182.6 116 74.1
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 2.1e-44 182.6 118 74.6
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 2.1e-44 182.6 117 71.8
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 2.8e-44 182.2 117 73.5
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 2.8e-44 182.2 117 73.5
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 2.8e-44 182.2 123 74.0
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 3.6e-44 181.8 118 75.4
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 6.2e-44 181.0 117 76.1
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.1e-43 180.3 117 76.1
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.4e-43 179.1 119 73.9
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 2.4e-43 179.1 121 76.0
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 4.0e-43 178.3 116 76.7
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 5.2e-43 177.9 120 74.2
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 5.8e-42 174.5 121 71.1
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 7.6e-42 174.1 97 88.7
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 4.9e-41 171.4 118 70.3
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 5.4e-40 167.9 138 63.8
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 7.6e-34 147.5 115 58.3
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 7.6e-34 147.5 116 62.1
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 4.2e-32 141.7 121 57.9
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 4.2e-32 141.7 120 60.8
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 7.1e-32 141.0 92 75.0
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.5e-29 133.3 120 51.7
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 4.3e-29 131.7 124 52.4
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 9.6e-29 130.6 117 53.0
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.3e-28 130.2 88 72.7
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 1.3e-20 103.6 117 51.3
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 4.8e-20 101.7 113 54.9
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.3e-17 93.6 71 66.2
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 8.4e-17 90.9 125 49.6
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 4.8e-12 75.1 54 68.5
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 8.2e-12 74.3 98 48.0
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 2.1e-07 59.7 114 30.7


User provided reference genes

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