Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 4.9e-277 957.2 493 100.0
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 1.1e-204 716.8 406 90.6
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 6.4e-144 515.0 508 56.7
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 1.5e-137 493.8 517 53.6
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 2.0e-137 493.4 498 54.6
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 2.4e-135 486.5 504 54.6
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 5.4e-135 485.3 503 55.3
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 3.9e-133 479.2 509 53.8
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 5.1e-133 478.8 509 52.1
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 1.1e-132 477.6 510 53.7
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 2.8e-131 473.0 498 53.0
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 6.8e-130 468.4 510 52.5
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 1.7e-128 463.8 506 51.6
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 6.4e-128 461.8 506 51.4
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 1.2e-126 457.6 505 50.7
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 1.0e-125 454.5 511 50.5
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 1.3e-125 454.1 502 50.8
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 3.0e-125 453.0 507 52.5
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 4.3e-124 449.1 516 50.0
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 4.3e-124 449.1 507 51.3
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 3.6e-123 446.0 508 50.2
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 3.6e-123 446.0 505 50.7
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 2.6e-121 439.9 509 49.1
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 4.4e-121 439.1 499 52.5
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.4e-119 434.1 501 49.5
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 5.4e-119 432.2 504 48.6
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 7.1e-119 431.8 491 50.7
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 9.3e-119 431.4 491 50.7
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 4.6e-118 429.1 513 48.7
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 3.0e-117 426.4 507 49.9
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 3.0e-117 426.4 502 49.2
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 6.6e-117 425.2 507 48.9
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 6.6e-117 425.2 513 48.5
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 1.5e-116 424.1 505 48.1
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 3.3e-116 422.9 507 49.3
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 3.3e-116 422.9 502 49.0
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 5.6e-116 422.2 503 49.1
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 6.2e-115 418.7 507 47.1
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 6.2e-115 418.7 507 47.3
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 1.1e-114 417.9 508 47.2
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 4.0e-114 416.0 424 54.2
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 9.0e-114 414.8 509 48.1
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 1.5e-113 414.1 481 49.3
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 2.0e-113 413.7 506 48.0
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 7.6e-113 411.8 508 49.0
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 9.9e-113 411.4 413 55.2
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 9.3e-111 404.8 503 45.9
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 2.7e-110 403.3 516 45.0
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 1.0e-109 401.4 512 46.7
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 9.6e-108 394.8 505 44.0
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 2.1e-107 393.7 507 44.2
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 2.8e-107 393.3 506 46.6
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 3.7e-107 392.9 507 45.2
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 3.7e-107 392.9 507 44.2
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 6.2e-107 392.1 507 44.2
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 8.1e-107 391.7 507 45.4
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 2.4e-106 390.2 511 44.4
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 5.3e-106 389.0 424 51.2
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 2.0e-105 387.1 437 50.8
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 5.8e-105 385.6 505 45.3
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 1.3e-104 384.4 518 46.7
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 2.2e-104 383.6 508 44.1
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 9.3e-103 378.3 510 43.1
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 6.7e-101 372.1 445 46.7
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 4.8e-99 365.9 421 49.6
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.9e-96 356.7 416 49.8
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.8e-96 356.3 416 49.8
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 5.1e-93 345.9 428 47.7
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 1.5e-92 344.4 506 43.1
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 1.3e-88 331.3 412 47.6
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 4.2e-79 299.7 310 52.6
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 7.2e-79 298.9 550 37.6
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 6.1e-78 295.8 564 36.7
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 3.2e-71 273.5 509 36.7
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 2.1e-70 270.8 246 58.1
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 4.4e-68 263.1 470 37.4
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 2.6e-65 253.8 500 34.4
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 7.7e-65 252.3 369 43.9
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 1.4e-34 151.8 474 27.0
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 6.6e-32 142.9 449 26.9
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.6e-30 137.1 159 49.7
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 1.1e-26 125.6 119 60.5
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 1.9e-18 98.2 236 36.4
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 2.7e-09 67.8 506 25.1
SMO353G0419 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 1.3e-06 58.9 68 41.2
CBR_g17901 Chara braunii HOM05D007800 ORTHO05D009881 1.6e-06 58.5 282 24.5
SMO302G0010 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 8.1e-06 56.2 62 41.9


User provided reference genes

Program Settings