Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3375 Papaver somniferum HOM05D006545 ORTHO05D007985 6.6e-35 150.2 79 100.0
PSO063G6244 Papaver somniferum HOM05D006545 ORTHO05D007985 7.3e-34 146.7 79 97.5
Migut.L01494 Erythranthe guttata HOM05D006545 ORTHO05D007985 1.7e-27 125.6 79 77.2
Actinidia29903 Actinidia chinensis HOM05D000085 ORTHO05D001460 1.1e-26 122.9 79 75.9
MSTRG.10562 Avicennia marina HOM05D006545 ORTHO05D007985 1.5e-26 122.5 79 75.9
vmacro06292 Vaccinium macrocarpon HOM05D006545 ORTHO05D007985 1.9e-26 122.1 79 75.9
Cc06_g11430 Coffea canephora HOM05D006545 ORTHO05D007985 4.3e-26 120.9 79 75.9
Dinv42321 Davidia involucrata HOM05D006545 ORTHO05D007985 5.6e-26 120.6 79 74.7
unitig_699.g19296 Utricularia gibba HOM05D006545 ORTHO05D007985 1.2e-25 119.4 79 75.9
Cfa003081 Carpinus fangiana HOM05D000085 ORTHO05D001460 1.6e-25 119.0 74 78.4
Solyc12g008860.3 Solanum lycopersicum HOM05D006545 ORTHO05D007985 1.6e-25 119.0 79 73.4
Sopen12g003790 Solanum pennellii HOM05D006545 ORTHO05D007985 1.6e-25 119.0 79 73.4
CiPaw.04G149100 Carya illinoinensis HOM05D006545 ORTHO05D007985 2.1e-25 118.6 74 78.4
HanXRQChr12g0363181 Helianthus annuus HOM05D006545 ORTHO05D007985 2.1e-25 118.6 79 73.4
Actinidia19138 Actinidia chinensis HOM05D006545 ORTHO05D007985 2.8e-25 118.2 79 74.7
PGSC0003DMG400000279 Solanum tuberosum HOM05D006545 ORTHO05D007985 2.8e-25 118.2 79 73.4
Dinv36770 Davidia involucrata HOM05D006545 ORTHO05D007985 3.6e-25 117.9 79 74.7
ATR0749G052 Amborella trichopoda HOM05D006545 ORTHO05D007985 4.7e-25 117.5 79 74.7
CDE06G0764 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 4.7e-25 117.5 79 73.4
CDE07G1614 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 4.7e-25 117.5 79 73.4
Ciclev10010087m.g Citrus clementina HOM05D006545 ORTHO05D007985 4.7e-25 117.5 74 78.4
Gohir.A05G030100 Gossypium hirsutum HOM05D006545 ORTHO05D007985 4.7e-25 117.5 79 74.7
Gohir.D05G031500 Gossypium hirsutum HOM05D006545 ORTHO05D007985 4.7e-25 117.5 79 74.7
Gorai.009G031700 Gossypium raimondii HOM05D006545 ORTHO05D007985 4.7e-25 117.5 79 74.7
Thecc.09G088900 Theobroma cacao HOM05D006545 ORTHO05D007985 4.7e-25 117.5 79 74.7
TAR383G1000 Trochodendron aralioides HOM05D006545 ORTHO05D007985 4.7e-25 117.5 78 73.1
CiPaw.03G215100 Carya illinoinensis HOM05D006545 ORTHO05D007985 6.2e-25 117.1 74 77.0
MBI04_g31162_MAGBIO Magnolia biondii HOM05D006545 ORTHO05D007985 6.2e-25 117.1 79 73.4
Nn8g38862 Nelumbo nucifera HOM05D006545 ORTHO05D007985 6.2e-25 117.1 79 74.7
EL10Ac8g19212 Beta vulgaris HOM05D006545 ORTHO05D007985 8.1e-25 116.7 79 72.2
Gohir.A13G193400 Gossypium hirsutum HOM05D006545 ORTHO05D007985 8.1e-25 116.7 79 73.4
unitig_85.g27258 Utricularia gibba HOM05D006545 ORTHO05D007985 1.1e-24 116.3 79 75.9
MELO3C015473.2 Cucumis melo HOM05D006545 ORTHO05D007985 1.4e-24 115.9 79 69.6
PGR102G1056 Punica granatum HOM05D006545 ORTHO05D007985 1.4e-24 115.9 74 77.0
AUR62033964 Chenopodium quinoa HOM05D006545 ORTHO05D007985 1.8e-24 115.5 78 73.1
Duzib150G0099 Durio zibethinus HOM05D006545 ORTHO05D007985 1.8e-24 115.5 79 73.4
Duzib168G1224 Durio zibethinus HOM05D006545 ORTHO05D007985 1.8e-24 115.5 79 73.4
GSVIVG01015199001 Vitis vinifera HOM05D006545 ORTHO05D007985 1.8e-24 115.5 79 70.9
DCAR_028856 Daucus carota HOM05D006545 ORTHO05D007985 2.4e-24 115.2 74 77.0
DCAR_032235 Daucus carota HOM05D006545 ORTHO05D007985 2.4e-24 115.2 74 77.0
Gohir.D13G199200 Gossypium hirsutum HOM05D006545 ORTHO05D007985 3.1e-24 114.8 79 72.2
Nitab4.5_0000540g0270 Nicotiana tabacum HOM05D006545 ORTHO05D007985 4.0e-24 114.4 79 72.2
Ah.09g228260 Amaranthus hybridus HOM05D006545 ORTHO05D007985 5.2e-24 114.0 79 70.9
CsaV3_1G040450 Cucumis sativus L. HOM05D006545 ORTHO05D007985 6.9e-24 113.6 74 73.0
RcHm_v2.0_Chr2g0093401 Rosa chinensis HOM05D006545 ORTHO05D007985 6.9e-24 113.6 74 75.7
ClCG03G015590 Citrullus lanatus HOM05D006545 ORTHO05D007985 9.0e-24 113.2 74 71.6
Lsat_1_v5_gn_7_37040 Lactuca sativa HOM05D006545 ORTHO05D007985 9.0e-24 113.2 77 70.1
Lj4g0002489 Lotus japonicus HOM05D006545 ORTHO05D007985 9.0e-24 113.2 74 75.7
FvH4_1g07510 Fragaria vesca HOM05D006545 ORTHO05D007985 1.2e-23 112.8 74 75.7
FAN19G0384 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.2e-23 112.8 74 75.7
FAN23G2021 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.2e-23 112.8 74 75.7
FAN26G0590 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.2e-23 112.8 74 75.7
Lalb_Chr07g0180851 Lupinus albus HOM05D006545 ORTHO05D007985 1.2e-23 112.8 76 73.7
Phvul.003G136800 Phaseolus vulgaris HOM05D006545 ORTHO05D007985 1.2e-23 112.8 74 75.7
Sc18g0002090 Simmondsia chinensis HOM05D000085 ORTHO05D001460 1.2e-23 112.8 78 70.5
CANSAT56G1499 Cannabis sativa HOM05D006545 ORTHO05D007985 1.5e-23 112.5 74 75.7
CANSAT56G4473 Cannabis sativa HOM05D006545 ORTHO05D007985 1.5e-23 112.5 74 75.7
AUR62029070 Chenopodium quinoa HOM05D006545 ORTHO05D007985 1.5e-23 112.5 78 70.5
Glyma.13G104200 Glycine max HOM05D006545 ORTHO05D007985 1.5e-23 112.5 74 74.3
Glyma.17G054900 Glycine max HOM05D006545 ORTHO05D007985 1.5e-23 112.5 74 74.3
Gorai.013G227700 Gossypium raimondii HOM05D006545 ORTHO05D007985 1.5e-23 112.5 79 70.9
TWI34G0024 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 2.0e-23 112.1 74 74.3
Potri.004G215200 Populus trichocarpa HOM05D006545 ORTHO05D007985 2.6e-23 111.7 79 69.6
TWI63G0169 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 3.4e-23 111.3 74 74.3
Nitab4.5_0008523g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 4.4e-23 110.9 79 70.9
Sabra06G0115900 Salix brachista HOM05D006545 ORTHO05D007985 4.4e-23 110.9 79 70.9
Manes.03G034000 Manihot esculenta HOM05D006545 ORTHO05D007985 5.8e-23 110.5 74 74.3
Sed0026852 Sechium edule HOM05D006545 ORTHO05D007985 9.9e-23 109.8 74 71.6
Manes.16G101800 Manihot esculenta HOM05D006545 ORTHO05D007985 1.3e-22 109.4 76 72.4
QL02p062521 Quercus lobata HOM05D006545 ORTHO05D007985 1.3e-22 109.4 73 71.2
Potri.006G146800 Populus trichocarpa HOM05D006545 ORTHO05D007985 1.7e-22 109.0 79 68.4
ECA240G1755 Erigeron canadensis HOM05D006545 ORTHO05D007985 2.9e-22 108.2 80 67.5
Aqoxy7G01208 Aquilegia oxysepala HOM05D006545 ORTHO05D007985 4.9e-22 107.5 78 67.9
Eucgr.C00895 Eucalyptus grandis HOM05D006545 ORTHO05D007985 6.4e-22 107.1 77 68.8
Thhalv10026717m.g Eutrema salsugineum HOM05D006545 ORTHO05D007985 8.4e-22 106.7 76 69.7
Lalb_Chr13g0299701 Lupinus albus HOM05D006545 ORTHO05D007985 8.4e-22 106.7 76 69.7
PSO210G2413 Papaver somniferum HOM05D006545 ORTHO05D007985 8.4e-22 106.7 79 70.9
PSO210G4511 Papaver somniferum HOM05D006545 ORTHO05D007985 8.4e-22 106.7 79 69.6
Prupe.7G209400 Prunus persica HOM05D006545 ORTHO05D007985 1.1e-21 106.3 78 69.2
Aa31LG2G20830 Aethionema arabicum HOM05D006545 ORTHO05D007985 1.4e-21 105.9 76 69.7
Atru.chr7.1592 Acer truncatum HOM05D006545 ORTHO05D007985 1.9e-21 105.5 74 70.3
THA.LOC104814622 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 2.4e-21 105.1 74 70.3
THA.LOC104820022 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 2.4e-21 105.1 76 69.7
AT4G29735 Arabidopsis thaliana HOM05D006545 ORTHO05D007985 3.2e-21 104.8 76 69.7
Nitab4.5_0006552g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 3.2e-21 104.8 77 68.8
Psat4g015120 Pisum sativum HOM05D006545 ORTHO05D007985 3.2e-21 104.8 76 68.4
Sp7g27510 Schrenkiella parvula HOM05D006545 ORTHO05D007985 3.2e-21 104.8 76 69.7
AL7G22570 Arabidopsis lyrata HOM05D006545 ORTHO05D007985 4.2e-21 104.4 76 69.7
Carub.0007s1077 Capsella rubella HOM05D006545 ORTHO05D007985 4.2e-21 104.4 76 69.7
CARHR237610 Cardamine hirsuta HOM05D006545 ORTHO05D007985 5.4e-21 104.0 76 69.7
MD02G1079700 Malus domestica HOM05D006545 ORTHO05D007985 6.0e-20 100.5 76 65.8
Os06g0567000 Oryza sativa ssp. japonica HOM05D006545 ORTHO05D007985 7.8e-20 100.1 76 61.8
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 1.0e-19 99.8 74 67.6
Medtr4g126270 Medicago truncatula HOM05D000085 ORTHO05D001460 1.0e-19 99.8 74 66.2
Zm00001eb383910 Zea mays HOM05D006545 ORTHO05D007985 1.0e-19 99.8 76 61.8
arahy.Tifrunner.gnm1.ann1.CH1R66 Arachis hypogaea HOM05D006545 ORTHO05D007985 1.3e-19 99.4 74 67.6
arahy.Tifrunner.gnm1.ann1.S1CX09 Arachis hypogaea HOM05D006545 ORTHO05D007985 1.3e-19 99.4 74 67.6
BcaNung00485 Brassica carinata HOM05D006545 ORTHO05D007985 1.3e-19 99.4 73 69.9
Zm00001eb277360 Zea mays HOM05D006545 ORTHO05D007985 1.3e-19 99.4 75 62.7
arahy.Tifrunner.gnm1.ann1.MQ59WG Arachis hypogaea HOM05D000085 ORTHO05D001460 1.7e-19 99.0 74 67.6
A03p59030 Brassica napus HOM05D006545 ORTHO05D007985 2.3e-19 98.6 77 64.9
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 2.3e-19 98.6 71 67.6
C03p89150 Brassica napus HOM05D006545 ORTHO05D007985 3.0e-19 98.2 77 64.9
BcaC01g01182 Brassica carinata HOM05D006545 ORTHO05D007985 6.6e-19 97.1 77 64.9
A01p08390 Brassica napus HOM05D000125 ORTHO05D000120 2.5e-18 95.1 76 64.5
BraA01t00787Z Brassica rapa HOM05D000125 ORTHO05D000120 2.5e-18 95.1 76 64.5
MD15G1207400 Malus domestica HOM05D006545 ORTHO05D007985 2.5e-18 95.1 74 62.2
Mapoly0003s0235 Marchantia polymorpha HOM05D006545 ORTHO05D007985 2.5e-18 95.1 79 62.0
TAR624G0377 Trochodendron aralioides HOM05D002302 ORTHO05D002728 5.6e-18 94.0 68 64.7
Nitab4.5_0004223g0010 Nicotiana tabacum HOM05D006545 ORTHO05D007985 9.6e-18 93.2 63 69.8
Nitab4.5_0004526g0070 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.6e-17 92.4 63 74.6
Pp3c11_23220 Physcomitrium patens HOM05D006545 ORTHO05D007985 1.6e-17 92.4 79 60.8
BcaC09g51752 Brassica carinata HOM05D006545 ORTHO05D007985 6.2e-17 90.5 73 65.8
COL.COLO4_18197 Corchorus olitorius HOM05D002302 ORTHO05D002728 1.8e-16 89.0 68 64.7
HPP92_008778 Vanilla planifolia HOM05D006545 ORTHO05D007985 2.4e-16 88.6 58 72.4
FAN26G2289 Fragaria x ananassa HOM05D006545 ORTHO05D007985 3.1e-16 88.2 60 68.3
SMO361G0088 Selaginella moellendorffii HOM05D006545 ORTHO05D007985 6.9e-16 87.0 72 59.7
Nitab4.5_0000095g0160 Nicotiana tabacum HOM05D006545 ORTHO05D007985 9.0e-16 86.7 74 59.5
BraA03t14963Z Brassica rapa HOM05D006545 ORTHO05D007985 1.5e-15 85.9 95 53.7
C07p57080 Brassica napus HOM05D006545 ORTHO05D007985 4.5e-15 84.3 63 69.8
BolC7t46179H Brassica oleracea HOM05D006545 ORTHO05D007985 4.5e-15 84.3 99 51.5
HanXRQChr12g0377121 Helianthus annuus HOM05D006545 ORTHO05D007985 1.7e-14 82.4 56 71.4
SalBow5G5008 Salvia bowleyana HOM05D006545 ORTHO05D007985 1.7e-14 82.4 62 64.5
BcaC09g52224 Brassica carinata HOM05D006545 ORTHO05D007985 6.4e-14 80.5 63 66.7
C01p09580 Brassica napus HOM05D000125 ORTHO05D007985 3.2e-13 78.2 63 69.8
C01p09720 Brassica napus HOM05D006545 ORTHO05D007985 3.2e-13 78.2 98 48.0
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 1.9e-10 68.9 47 76.6
C01p09620 Brassica napus HOM05D006545 ORTHO05D007985 1.6e-09 65.9 96 46.9
Lj7C676T8 Lonicera japonica HOM05D006545 ORTHO05D007985 9.0e-08 60.1 37 78.4
A08p19550 Brassica napus HOM05D006545 ORTHO05D007985 1.2e-07 59.7 46 65.2
Pp3c7_2400 Physcomitrium patens HOM05D006545 ORTHO05D007985 2.0e-07 58.9 130 33.8
BcaB03g12615 Brassica carinata HOM05D006545 ORTHO05D007985 7.6e-07 57.0 47 57.4
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 2.9e-06 55.1 36 63.9


User provided reference genes

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