Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3070 Papaver somniferum HOM05D003821 ORTHO05D004449 2.5e-37 158.3 82 100.0
PSO210G2740 Papaver somniferum HOM05D003821 ORTHO05D004449 1.5e-34 149.1 82 93.9
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 3.7e-12 74.7 80 50.0
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 2.4e-11 72.0 78 51.3
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 4.0e-11 71.2 70 52.9
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 5.3e-11 70.9 81 49.4
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 6.9e-11 70.5 70 52.9
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 6.9e-11 70.5 70 52.9
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 1.2e-10 69.7 70 52.9
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 1.2e-10 69.7 88 45.5
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 2.0e-10 68.9 86 44.2
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 2.0e-10 68.9 79 48.1
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 2.0e-10 68.9 68 54.4
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 5.8e-10 67.4 68 52.9
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 5.8e-10 67.4 79 46.8
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 7.6e-10 67.0 63 55.6
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 7.6e-10 67.0 89 47.2
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.3e-09 66.2 83 47.0
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 1.7e-09 65.9 90 43.3
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 2.9e-09 65.1 62 53.2
Os06g0274000 Oryza sativa ssp. japonica HOM05D003821 ORTHO05D004449 3.8e-09 64.7 74 47.3
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 8.4e-09 63.5 81 46.9
TPR.G33980 Trifolium pratense HOM05D003821 ORTHO05D004449 1.9e-08 62.4 103 36.9
QL10p053326 Quercus lobata HOM05D003821 ORTHO05D004449 2.5e-08 62.0 105 38.1
QL10p054532 Quercus lobata HOM05D003821 ORTHO05D004449 2.5e-08 62.0 105 38.1
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 3.2e-08 61.6 93 41.9
TPR.G9594 Trifolium pratense HOM05D003821 ORTHO05D004449 9.3e-08 60.1 112 37.5
Sed0001615 Sechium edule HOM05D003821 ORTHO05D004449 1.2e-07 59.7 81 44.4
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 2.1e-07 58.9 86 41.9
Nn4g25849 Nelumbo nucifera HOM05D003821 ORTHO05D004449 2.1e-07 58.9 86 43.0
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 2.7e-07 58.5 108 37.0
DCAR_002813 Daucus carota HOM05D003821 ORTHO05D004449 6.1e-07 57.4 88 40.9
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 7.9e-07 57.0 88 39.8
Medtr1g088760 Medicago truncatula HOM05D003821 ORTHO05D004449 7.9e-07 57.0 116 35.3
Sc24g0003850 Simmondsia chinensis HOM05D000714 ORTHO05D000544 1.0e-06 56.6 89 43.8
Zm00001eb380410 Zea mays HOM05D003821 ORTHO05D004449 3.0e-06 55.1 71 40.8
Gohir.A10G164000 Gossypium hirsutum HOM05D003821 ORTHO05D004449 3.9e-06 54.7 62 46.8
BcaB04g18333 Brassica carinata HOM05D003821 ORTHO05D004449 6.7e-06 53.9 74 44.6
TWI79G0264 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 8.7e-06 53.5 59 45.8


User provided reference genes

Program Settings