Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2949 Papaver somniferum HOM05D007586 ORTHO05D009554 9.9e-36 152.9 77 100.0
PSO210G0926 Papaver somniferum HOM05D007586 ORTHO05D009554 6.0e-33 143.7 77 93.5
Actinidia00073 Actinidia chinensis HOM05D007586 ORTHO05D009554 4.1e-21 104.4 61 82.0
Nn4g26123 Nelumbo nucifera HOM05D007586 ORTHO05D009554 1.5e-20 102.4 60 80.0
Dinv38351 Davidia involucrata HOM05D007586 ORTHO05D009554 1.0e-19 99.8 58 79.3
Manes.03G188100 Manihot esculenta HOM05D007586 ORTHO05D009554 1.7e-19 99.0 66 71.2
Thecc.04G272400 Theobroma cacao HOM05D007586 ORTHO05D009554 1.7e-19 99.0 79 64.6
COL.COLO4_13963 Corchorus olitorius HOM05D007586 ORTHO05D009554 2.9e-19 98.2 66 68.2
Potri.008G198500 Populus trichocarpa HOM05D007586 ORTHO05D009554 5.0e-19 97.4 81 61.7
Hma1.2p1_2025F.1_g311520 Hydrangea macrophylla HOM05D007586 ORTHO05D009554 1.4e-18 95.9 72 65.3
Ah.04g150810 Amaranthus hybridus HOM05D007586 ORTHO05D009554 3.2e-18 94.7 70 68.6
CSS0032912 Camellia sinensis var. sinensis HOM05D007586 ORTHO05D009554 3.2e-18 94.7 61 73.8
Cc03_g02750 Coffea canephora HOM05D007586 ORTHO05D009554 3.2e-18 94.7 61 72.1
vmacro15289 Vaccinium macrocarpon HOM05D007586 ORTHO05D009554 3.2e-18 94.7 73 63.0
Duzib151G0133 Durio zibethinus HOM05D007586 ORTHO05D009554 4.2e-18 94.4 74 63.5
Gohir.D10G162600 Gossypium hirsutum HOM05D007586 ORTHO05D009554 4.2e-18 94.4 59 71.2
Gorai.011G181700 Gossypium raimondii HOM05D007586 ORTHO05D009554 4.2e-18 94.4 59 71.2
Sabra08G0162000 Salix brachista HOM05D007586 ORTHO05D009554 4.2e-18 94.4 81 61.7
BcaB01g04886 Brassica carinata HOM05D007586 ORTHO05D009554 9.3e-18 93.2 69 66.7
DCAR_027132 Daucus carota HOM05D007586 ORTHO05D009554 9.3e-18 93.2 71 62.0
Sopen01g032230 Solanum pennellii HOM05D007586 ORTHO05D009554 9.3e-18 93.2 61 68.9
Gohir.A10G105800 Gossypium hirsutum HOM05D007586 ORTHO05D009554 1.2e-17 92.8 59 71.2
Lalb_Chr18g0055891 Lupinus albus HOM05D007586 ORTHO05D009554 1.6e-17 92.4 74 60.8
MBI19_g21636_MAGBIO Magnolia biondii HOM05D007586 ORTHO05D009554 2.1e-17 92.0 75 60.0
GSVIVG01017851001 Vitis vinifera HOM05D007586 ORTHO05D009554 2.1e-17 92.0 61 67.2
EL10Ac3g07262 Beta vulgaris HOM05D007586 ORTHO05D009554 4.6e-17 90.9 56 73.2
QL06p006198 Quercus lobata HOM05D007586 ORTHO05D009554 4.6e-17 90.9 70 61.4
unitig_749.g14058 Utricularia gibba HOM05D007586 ORTHO05D009554 4.6e-17 90.9 54 75.9
Atru.chr4.2702 Acer truncatum HOM05D007586 ORTHO05D009554 7.9e-17 90.1 87 54.0
Haze_01009 Corylus avellana HOM05D007586 ORTHO05D009554 7.9e-17 90.1 86 57.0
Thhalv10015193m.g Eutrema salsugineum HOM05D007586 ORTHO05D009554 7.9e-17 90.1 70 61.4
Sed0005131 Sechium edule HOM05D007586 ORTHO05D009554 7.9e-17 90.1 64 68.8
Potri.010G028000 Populus trichocarpa HOM05D007586 ORTHO05D009554 1.0e-16 89.7 77 61.0
TAR636G1069 Trochodendron aralioides HOM05D007586 ORTHO05D009554 1.8e-16 89.0 52 78.8
ATR0626G363 Amborella trichopoda HOM05D007586 ORTHO05D009554 2.3e-16 88.6 74 58.1
Zm00001eb349880 Zea mays HOM05D007586 ORTHO05D009554 3.0e-16 88.2 61 65.6
Cpa.g.sc16.72 Carica papaya HOM05D007586 ORTHO05D009554 3.9e-16 87.8 80 56.2
Sp6g25470 Schrenkiella parvula HOM05D007586 ORTHO05D009554 3.9e-16 87.8 68 63.2
BcaB01g05279 Brassica carinata HOM05D007586 ORTHO05D009554 5.1e-16 87.4 68 61.8
A03p09170 Brassica napus HOM05D007586 ORTHO05D009554 5.1e-16 87.4 60 66.7
C03p10700 Brassica napus HOM05D007586 ORTHO05D009554 5.1e-16 87.4 68 61.8
BraA03t10240Z Brassica rapa HOM05D007586 ORTHO05D009554 5.1e-16 87.4 60 66.7
Medtr2g020920 Medicago truncatula HOM05D007586 ORTHO05D009554 5.1e-16 87.4 80 53.8
arahy.Tifrunner.gnm1.ann1.5VHG73 Arachis hypogaea HOM05D007586 ORTHO05D009554 6.7e-16 87.0 61 67.2
Glyma.15G100600 Glycine max HOM05D007586 ORTHO05D009554 6.7e-16 87.0 79 57.0
arahy.Tifrunner.gnm1.ann1.SH255N Arachis hypogaea HOM05D007586 ORTHO05D009554 8.7e-16 86.7 61 65.6
CARHR194100 Cardamine hirsuta HOM05D007586 ORTHO05D009554 8.7e-16 86.7 69 62.3
BraA10t44138Z Brassica rapa HOM05D007586 ORTHO05D009554 1.1e-15 86.3 53 71.7
CsaV3_6G005530 Cucumis sativus L. HOM05D007586 ORTHO05D009554 1.1e-15 86.3 65 64.6
CiPaw.02G089500 Carya illinoinensis HOM05D007586 ORTHO05D009554 1.9e-15 85.5 66 60.6
SalBow2G2177 Salvia bowleyana HOM05D007586 ORTHO05D009554 1.9e-15 85.5 56 67.9
Prupe.1G146700 Prunus persica HOM05D007586 ORTHO05D009554 3.3e-15 84.7 57 64.9
Lj6g0006659 Lotus japonicus HOM05D007586 ORTHO05D009554 4.3e-15 84.3 68 60.3
TPR.G18017 Trifolium pratense HOM05D007586 ORTHO05D009554 4.3e-15 84.3 59 61.0
Migut.G00284 Erythranthe guttata HOM05D007586 ORTHO05D009554 5.7e-15 84.0 52 73.1
FvH4_4g16650 Fragaria vesca HOM05D007586 ORTHO05D009554 5.7e-15 84.0 73 57.5
FAN12G0362 Fragaria x ananassa HOM05D007586 ORTHO05D009554 5.7e-15 84.0 73 57.5
THA.LOC104802735 Tarenaya hassleriana HOM05D007586 ORTHO05D009554 5.7e-15 84.0 70 55.7
Cfa015540 Carpinus fangiana HOM05D007586 ORTHO05D009554 7.4e-15 83.6 86 53.5
COL.COLO4_25734 Corchorus olitorius HOM05D007586 ORTHO05D009554 9.7e-15 83.2 54 68.5
ClCG06G005620 Citrullus lanatus HOM05D007586 ORTHO05D009554 2.2e-14 82.0 65 61.5
Phvul.006G158200 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 2.2e-14 82.0 73 53.4
MD13G1177700 Malus domestica HOM05D007586 ORTHO05D009554 2.8e-14 81.6 66 59.1
Phvul.006G158400 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 2.8e-14 81.6 84 51.2
RcHm_v2.0_Chr4g0420101 Rosa chinensis HOM05D007586 ORTHO05D009554 3.7e-14 81.3 59 64.4
ECA246G1660 Erigeron canadensis HOM05D007586 ORTHO05D009554 4.8e-14 80.9 59 61.0
Psat1g185520 Pisum sativum HOM05D007586 ORTHO05D009554 6.3e-14 80.5 77 54.5
Glyma.13G212100 Glycine max HOM05D007586 ORTHO05D009554 1.1e-13 79.7 81 53.1
AUR62018376 Chenopodium quinoa HOM05D000949 ORTHO05D001276 3.1e-13 78.2 58 65.5
SEGI_37206 Sequoiadendron giganteum HOM05D007586 ORTHO05D009554 3.1e-13 78.2 54 63.0
TWI09G0380 Tripterygium wilfordii HOM05D007586 ORTHO05D009554 4.1e-13 77.8 85 52.9
Os05g0404300 Oryza sativa ssp. japonica HOM05D007586 ORTHO05D009554 5.3e-13 77.4 52 67.3
PGR031G0345 Punica granatum HOM05D007586 ORTHO05D009554 1.5e-12 75.9 46 71.7
BcaB08g36636 Brassica carinata HOM05D007586 ORTHO05D009554 3.4e-12 74.7 44 72.7
AL6G30270 Arabidopsis lyrata HOM05D007586 ORTHO05D009554 4.5e-12 74.3 44 72.7
AT5G18920 Arabidopsis thaliana HOM05D007586 ORTHO05D009554 4.5e-12 74.3 44 72.7
Carub.0006s1722 Capsella rubella HOM05D007586 ORTHO05D009554 4.5e-12 74.3 44 72.7
Hma1.2p1_0511F.1_g169220 Hydrangea macrophylla HOM05D000488 ORTHO05D000347 1.0e-11 73.2 73 53.4
Ciclev10006319m.g Citrus clementina HOM05D007586 ORTHO05D009554 1.7e-11 72.4 46 69.6
Lj3g0017006 Lotus japonicus HOM05D007586 ORTHO05D009554 2.2e-11 72.0 62 59.7
arahy.Tifrunner.gnm1.ann1.70FWSL Arachis hypogaea HOM05D007586 ORTHO05D009554 5.0e-11 70.9 69 52.2
Nitab4.5_0009518g0010 Nicotiana tabacum HOM05D007586 ORTHO05D009554 5.0e-11 70.9 41 73.2
CANSAT01G2672 Cannabis sativa HOM05D007586 ORTHO05D009554 6.5e-11 70.5 45 66.7
BolC3t13546H Brassica oleracea HOM05D007586 ORTHO05D009554 3.2e-10 68.2 55 60.0
Nitab4.5_0000201g0230 Nicotiana tabacum HOM05D007586 ORTHO05D009554 4.2e-10 67.8 42 66.7
Aa31LG11G10810 Aethionema arabicum HOM05D007586 ORTHO05D009554 7.2e-10 67.0 57 59.6
FAN22G2185 Fragaria x ananassa HOM05D007586 ORTHO05D009554 9.4e-10 66.6 73 52.1
Pp3c2_37920 Physcomitrium patens HOM05D007586 ORTHO05D009554 3.6e-09 64.7 66 45.5
Ca_00589_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 4.6e-09 64.3 37 73.0
Nitab4.5_0000059g0210 Nicotiana tabacum HOM05D007586 ORTHO05D009554 7.9e-09 63.5 46 63.0
A10p20750 Brassica napus HOM05D007586 ORTHO05D009554 3.0e-08 61.6 39 69.2
Medtr2g020940 Medicago truncatula HOM05D007586 ORTHO05D009554 8.8e-08 60.1 63 49.2
Eucgr.B01188 Eucalyptus grandis HOM05D007586 ORTHO05D009554 5.7e-07 57.4 31 77.4


User provided reference genes

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