Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2930 Papaver somniferum HOM05D003718 ORTHO05D004402 0.0e+00 1329.3 696 100.0
PSO210G5136 Papaver somniferum HOM05D003718 ORTHO05D004402 0.0e+00 1309.7 696 98.6
TAR633G0796 Trochodendron aralioides HOM05D003718 ORTHO05D004402 6.9e-261 904.0 694 68.0
TAR362G0778 Trochodendron aralioides HOM05D003718 ORTHO05D004402 4.6e-257 891.3 696 68.0
Cfa013046 Carpinus fangiana HOM05D003718 ORTHO05D004402 3.0e-256 888.6 694 68.0
Dinv34637 Davidia involucrata HOM05D003718 ORTHO05D004402 6.7e-256 887.5 693 65.8
CiPaw.03G266000 Carya illinoinensis HOM05D003718 ORTHO05D004402 1.6e-254 882.9 694 67.0
CSS0049010 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 1.5e-252 876.3 693 66.1
CSS0040480 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 3.4e-252 875.2 693 66.4
QL09p039591 Quercus lobata HOM05D003718 ORTHO05D004402 4.5e-252 874.8 713 65.9
Nn1g02814 Nelumbo nucifera HOM05D003718 ORTHO05D004402 1.3e-251 873.2 695 65.5
Aqoxy1G01842 Aquilegia oxysepala HOM05D003718 ORTHO05D004402 4.9e-251 871.3 688 67.6
CANSAT01G0671 Cannabis sativa HOM05D003718 ORTHO05D004402 1.9e-250 869.4 693 67.1
Prupe.8G221600 Prunus persica HOM05D003718 ORTHO05D004402 1.9e-250 869.4 692 66.5
Actinidia07305 Actinidia chinensis HOM05D003718 ORTHO05D004402 7.1e-250 867.5 693 65.2
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 7.9e-249 864.0 694 65.4
CiPaw.04G187700 Carya illinoinensis HOM05D003718 ORTHO05D004402 1.8e-248 862.8 694 66.1
MD10G1181500 Malus domestica HOM05D003718 ORTHO05D004402 5.1e-248 861.3 698 65.2
Ciclev10019124m.g Citrus clementina HOM05D003718 ORTHO05D004402 6.7e-248 860.9 694 64.6
Potri.002G036600 Populus trichocarpa HOM05D003718 ORTHO05D004402 3.7e-246 855.1 697 65.4
Atru.chr5.1725 Acer truncatum HOM05D003718 ORTHO05D004402 1.1e-245 853.6 694 65.3
Manes.12G033700 Manihot esculenta HOM05D003718 ORTHO05D004402 4.1e-245 851.7 699 64.2
Nn3g19693 Nelumbo nucifera HOM05D003718 ORTHO05D004402 4.1e-245 851.7 695 65.6
MD05G1194900 Malus domestica HOM05D003718 ORTHO05D004402 9.0e-245 850.5 697 64.6
Potri.005G226100 Populus trichocarpa HOM05D003718 ORTHO05D004402 2.6e-244 849.0 697 64.4
MELO3C025537.2 Cucumis melo HOM05D003718 ORTHO05D004402 3.8e-243 845.1 693 64.1
Glyma.03G164400 Glycine max HOM05D003718 ORTHO05D004402 3.8e-243 845.1 693 65.1
Glyma.19G165800 Glycine max HOM05D003718 ORTHO05D004402 5.0e-243 844.7 693 64.5
GSVIVG01028357001 Vitis vinifera HOM05D003718 ORTHO05D004402 6.5e-243 844.3 701 64.9
Duzib211G0290 Durio zibethinus HOM05D003718 ORTHO05D004402 1.4e-242 843.2 694 63.4
Manes.13G035300 Manihot esculenta HOM05D003718 ORTHO05D004402 9.4e-242 840.5 699 63.9
Eucgr.K03255 Eucalyptus grandis HOM05D003718 ORTHO05D004402 1.2e-241 840.1 691 64.3
Thecc.01G255900 Theobroma cacao HOM05D003718 ORTHO05D004402 7.9e-241 837.4 694 62.7
Phvul.001G162000 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 1.8e-240 836.3 693 63.9
TWI12G1081 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 3.0e-240 835.5 695 63.7
AUR62013766 Chenopodium quinoa HOM05D003718 ORTHO05D004402 5.1e-240 834.7 687 64.0
Sabra05G0174600 Salix brachista HOM05D003718 ORTHO05D004402 5.1e-240 834.7 720 62.1
CsaV3_1G015830 Cucumis sativus L. HOM05D003718 ORTHO05D004402 1.1e-239 833.6 693 63.1
TWI75G1389 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 1.9e-239 832.8 696 63.2
Sed0001928 Sechium edule HOM05D003718 ORTHO05D004402 3.3e-239 832.0 693 62.6
Gorai.001G179000 Gossypium raimondii HOM05D003718 ORTHO05D004402 4.3e-239 831.6 694 63.5
Gohir.D07G156100 Gossypium hirsutum HOM05D003718 ORTHO05D004402 7.4e-239 830.9 694 63.5
arahy.Tifrunner.gnm1.ann1.FU7SP6 Arachis hypogaea HOM05D003718 ORTHO05D004402 6.3e-238 827.8 710 62.8
Gohir.A07G149800 Gossypium hirsutum HOM05D003718 ORTHO05D004402 6.3e-238 827.8 694 63.1
RcHm_v2.0_Chr6g0287811 Rosa chinensis HOM05D003718 ORTHO05D004402 1.1e-237 827.0 692 64.0
FvH4_2g21250 Fragaria vesca HOM05D003718 ORTHO05D004402 1.8e-237 826.2 692 64.2
Lj5g0026512 Lotus japonicus HOM05D003718 ORTHO05D004402 3.1e-237 825.5 688 63.1
arahy.Tifrunner.gnm1.ann1.QXN52H Arachis hypogaea HOM05D003718 ORTHO05D004402 6.9e-237 824.3 707 62.8
VMungo1383G2169 Vigna mungo HOM05D003718 ORTHO05D004402 1.5e-236 823.2 693 62.9
vmacro14814 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 2.0e-236 822.8 646 66.4
Duzib133G1085 Durio zibethinus HOM05D003718 ORTHO05D004402 4.5e-236 821.6 694 62.4
Sabra02G0029600 Salix brachista HOM05D003718 ORTHO05D004402 1.3e-235 820.1 729 61.3
Solyc05g046330.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 3.8e-235 818.5 695 63.2
Lalb_Chr02g0152551 Lupinus albus HOM05D003718 ORTHO05D004402 8.5e-235 817.4 697 62.0
FAN15G3248 Fragaria x ananassa HOM05D003718 ORTHO05D004402 5.5e-234 814.7 714 61.9
Gorai.007G147600 Gossypium raimondii HOM05D003718 ORTHO05D004402 4.7e-233 811.6 694 61.8
Duzib138G1036 Durio zibethinus HOM05D003718 ORTHO05D004402 6.1e-233 811.2 694 61.7
Gohir.D11G137575 Gossypium hirsutum HOM05D003718 ORTHO05D004402 6.1e-233 811.2 694 61.8
Sopen05g027610 Solanum pennellii HOM05D003718 ORTHO05D004402 2.3e-232 809.3 693 62.6
FAN24G2691 Fragaria x ananassa HOM05D003718 ORTHO05D004402 1.1e-231 807.0 713 61.7
THA.LOC104812416 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 5.7e-231 804.7 695 62.3
Gohir.A11G131600 Gossypium hirsutum HOM05D003718 ORTHO05D004402 2.2e-230 802.7 694 61.7
Lalb_Chr21g0313961 Lupinus albus HOM05D003718 ORTHO05D004402 4.8e-230 801.6 688 61.8
THA.LOC104806254 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 6.3e-230 801.2 694 60.7
CAN.G106.18 Capsicum annuum HOM05D003718 ORTHO05D004402 8.2e-230 800.8 694 61.7
Psat6g054080 Pisum sativum HOM05D003718 ORTHO05D004402 4.1e-229 798.5 689 62.1
Cc01_g18200 Coffea canephora HOM05D003718 ORTHO05D004402 2.0e-228 796.2 695 60.1
FAN27G0576 Fragaria x ananassa HOM05D003718 ORTHO05D004402 4.5e-228 795.0 746 59.1
Glyma.10G038000 Glycine max HOM05D003718 ORTHO05D004402 5.0e-227 791.6 663 63.5
Medtr1g069780 Medicago truncatula HOM05D003718 ORTHO05D004402 9.4e-226 787.3 673 62.7
MSTRG.21485 Avicennia marina HOM05D003718 ORTHO05D004402 1.6e-225 786.6 693 59.0
Migut.D00439 Erythranthe guttata HOM05D003718 ORTHO05D004402 2.7e-225 785.8 694 59.2
Hund17111 Selenicereus undatus HOM05D003718 ORTHO05D004402 2.7e-225 785.8 671 62.0
Peaxi162Scf00320g00717 Petunia axillaris HOM05D003718 ORTHO05D004402 3.6e-225 785.4 693 60.0
Ca_09672_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 6.7e-224 781.2 691 60.9
EL10Ac1g00739 Beta vulgaris HOM05D003718 ORTHO05D004402 8.8e-224 780.8 720 59.2
CAN.G54.7 Capsicum annuum HOM05D003718 ORTHO05D004402 1.1e-223 780.4 696 59.2
PGR031G0689 Punica granatum HOM05D003718 ORTHO05D004402 1.1e-223 780.4 679 61.0
Sopen07g005600 Solanum pennellii HOM05D003718 ORTHO05D004402 2.6e-223 779.2 693 59.9
Phvul.007G191800 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 3.3e-223 778.9 668 61.8
TPR.G5874 Trifolium pratense HOM05D003718 ORTHO05D004402 3.3e-223 778.9 646 63.0
CARHR227730 Cardamine hirsuta HOM05D003718 ORTHO05D004402 1.3e-222 776.9 685 60.3
Lsat_1_v5_gn_8_92540 Lactuca sativa HOM05D003718 ORTHO05D004402 1.4e-221 773.5 677 60.0
ECA236G3831 Erigeron canadensis HOM05D003718 ORTHO05D004402 1.8e-221 773.1 695 59.9
CDE07G1087 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 4.1e-221 771.9 693 59.6
Rhsim01G0262400 Rhododendron simsii HOM05D003718 ORTHO05D004402 1.3e-219 766.9 634 63.7
AL7G32970 Arabidopsis lyrata HOM05D003718 ORTHO05D004402 5.0e-219 765.0 685 59.6
arahy.Tifrunner.gnm1.ann1.EWE7BX Arachis hypogaea HOM05D003718 ORTHO05D004402 5.0e-219 765.0 730 57.5
DCAR_000921 Daucus carota HOM05D003718 ORTHO05D004402 6.5e-219 764.6 694 59.4
AT4G21150 Arabidopsis thaliana HOM05D003718 ORTHO05D004402 1.1e-218 763.8 691 59.5
Thhalv10024580m.g Eutrema salsugineum HOM05D003718 ORTHO05D004402 1.9e-218 763.1 694 59.2
Sp7g19230 Schrenkiella parvula HOM05D003718 ORTHO05D004402 3.2e-218 762.3 687 59.0
Carub.0007s2028 Capsella rubella HOM05D003718 ORTHO05D004402 9.4e-218 760.8 685 59.1
SalBow4G0483 Salvia bowleyana HOM05D003718 ORTHO05D004402 1.6e-217 760.0 713 57.1
arahy.Tifrunner.gnm1.ann1.B1YDGW Arachis hypogaea HOM05D003718 ORTHO05D004402 4.7e-217 758.4 711 57.9
VMungo0720G0687 Vigna mungo HOM05D003718 ORTHO05D004402 1.0e-216 757.3 668 60.0
CDE04G2599 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 6.7e-216 754.6 693 58.6
Rhsim13G0036100 Rhododendron simsii HOM05D003718 ORTHO05D004402 2.0e-215 753.1 613 64.6
Psat3g056400 Pisum sativum HOM05D003718 ORTHO05D004402 4.4e-215 751.9 693 59.6
ATR0736G006 Amborella trichopoda HOM05D003718 ORTHO05D004402 1.3e-214 750.4 646 60.8
Os01g0911200 Oryza sativa ssp. japonica HOM05D003718 ORTHO05D004402 2.4e-213 746.1 690 58.0
BcaC09g51252 Brassica carinata HOM05D003718 ORTHO05D004402 9.1e-213 744.2 687 57.9
ClCG03G002590 Citrullus lanatus HOM05D003718 ORTHO05D004402 2.7e-212 742.7 693 57.9
BolC1t01458H Brassica oleracea HOM05D003718 ORTHO05D004402 5.9e-212 741.5 687 57.8
Oeu052043.2 Olea europaea HOM05D003718 ORTHO05D004402 1.0e-211 740.7 810 52.3
Zm00001eb143710 Zea mays HOM05D003718 ORTHO05D004402 8.5e-211 737.6 687 57.2
SGA_v2.0_scaffold1G00624 Striga asiatica HOM05D003718 ORTHO05D004402 1.5e-210 736.9 695 57.8
BraA03t14340Z Brassica rapa HOM05D003718 ORTHO05D004402 4.2e-210 735.3 711 57.5
HanXRQChr04g0110491 Helianthus annuus HOM05D003718 ORTHO05D004402 5.5e-210 734.9 646 59.6
Sc02g0003190 Simmondsia chinensis HOM05D003718 ORTHO05D004402 2.1e-209 733.0 620 62.4
Nitab4.5_0001572g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 2.7e-209 732.6 693 57.4
TPR.G9204 Trifolium pratense HOM05D003718 ORTHO05D004402 2.7e-209 732.6 712 57.6
Zm00001eb365020 Zea mays HOM05D003718 ORTHO05D004402 5.2e-208 728.4 685 57.1
Solyc07g014700.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 4.8e-206 721.8 646 59.9
Nitab4.5_0000413g0180 Nicotiana tabacum HOM05D003718 ORTHO05D004402 1.8e-205 719.9 693 57.1
SGA_v2.0_scaffold138G35211 Striga asiatica HOM05D003718 ORTHO05D004402 3.1e-205 719.2 805 51.1
AUR62023389 Chenopodium quinoa HOM05D003718 ORTHO05D004402 5.4e-205 718.4 687 57.5
HPP92_000351 Vanilla planifolia HOM05D003718 ORTHO05D004402 1.6e-204 716.8 686 56.6
BcaNung03839 Brassica carinata HOM05D003718 ORTHO05D004402 3.5e-204 715.7 694 56.1
Lsat_1_v5_gn_5_182920 Lactuca sativa HOM05D003718 ORTHO05D004402 3.8e-203 712.2 697 55.8
Ca_08683_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 1.2e-201 707.2 696 57.0
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 8.0e-201 704.5 645 60.3
BraA01t01195Z Brassica rapa HOM05D003718 ORTHO05D004402 1.0e-200 704.1 656 57.5
C01p15100 Brassica napus HOM05D003718 ORTHO05D004402 1.4e-200 703.7 685 55.5
A01p12510 Brassica napus HOM05D003718 ORTHO05D004402 1.8e-200 703.4 693 55.4
COL.COLO4_04023 Corchorus olitorius HOM05D003718 ORTHO05D004402 1.2e-199 700.7 626 59.9
A03p52670 Brassica napus HOM05D003718 ORTHO05D004402 2.6e-199 699.5 701 55.8
Aa31LG6G3160 Aethionema arabicum HOM05D003718 ORTHO05D004402 9.8e-199 697.6 663 57.9
C07p51100 Brassica napus HOM05D003718 ORTHO05D004402 2.1e-193 679.9 701 54.2
BolC7t45610H Brassica oleracea HOM05D003718 ORTHO05D004402 2.1e-193 679.9 701 54.2
Peaxi162Scf00906g00225 Petunia axillaris HOM05D003718 ORTHO05D004402 6.1e-193 678.3 674 56.7
unitig_22.g5287 Utricularia gibba HOM05D003718 ORTHO05D004402 1.7e-190 670.2 705 52.9
BolC3t20629H Brassica oleracea HOM05D003718 ORTHO05D004402 4.9e-182 642.1 737 51.4
C03p83480 Brassica napus HOM05D003718 ORTHO05D004402 2.9e-174 616.3 748 49.2
unitig_8.g3735 Utricularia gibba HOM05D003718 ORTHO05D004402 7.1e-173 611.7 654 52.6
Nitab4.5_0005411g0050 Nicotiana tabacum HOM05D003718 ORTHO05D004402 3.5e-172 609.4 652 52.9
Ah.05g177770 Amaranthus hybridus HOM05D003718 ORTHO05D004402 2.6e-167 593.2 530 58.1
Cpa.g.sc20.44 Carica papaya HOM05D003718 ORTHO05D004402 2.9e-158 563.1 697 48.1
BcaC01g00710 Brassica carinata HOM05D003718 ORTHO05D004402 9.9e-151 538.1 551 53.7
Nitab4.5_0005095g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 9.9e-143 511.5 504 55.6
Mapoly0028s0115 Marchantia polymorpha HOM05D003718 ORTHO05D004402 3.4e-127 459.9 689 40.2
Actinidia37517 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.7e-126 457.6 587 47.0
CsaV3_UNG055470 Cucumis sativus L. HOM05D003718 ORTHO05D004402 1.1e-120 438.3 454 54.8
AUR62043414 Chenopodium quinoa HOM05D003718 ORTHO05D004402 1.4e-115 421.4 353 63.2
Psat0ss9065g0080 Pisum sativum HOM05D003718 ORTHO05D004402 8.8e-107 392.1 442 51.1
SEGI_27157 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 2.7e-100 370.5 362 53.9
vmacro02673 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 1.2e-92 345.1 346 54.9
EL10Ac1g02094 Beta vulgaris HOM05D003718 ORTHO05D004402 6.8e-91 339.3 353 51.6
HanXRQChr11g0336771 Helianthus annuus HOM05D003718 ORTHO05D004402 8.3e-89 332.4 379 50.7
FAN20G1425 Fragaria x ananassa HOM05D003718 ORTHO05D004402 1.8e-88 331.3 327 57.2
Haze_21407 Corylus avellana HOM05D003718 ORTHO05D004402 1.7e-86 324.7 308 58.8
A08p15230 Brassica napus HOM05D003718 ORTHO05D001664 2.8e-84 317.4 539 39.7
AagrBONN_evm.TU.Sc2ySwM_340.234 Anthoceros agrestis HOM05D003718 ORTHO05D004402 1.1e-72 278.9 420 41.9
CBR_g32152 Chara braunii HOM05D003718 ORTHO05D004402 3.0e-62 244.2 686 32.5
Pp3c7_6480 Physcomitrium patens HOM05D003718 ORTHO05D004402 2.5e-61 241.1 381 42.8
Hma1.2p1_0576F.1_g181950 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 3.6e-60 237.3 294 50.3
Psat7g093680 Pisum sativum HOM05D003718 ORTHO05D004402 3.5e-55 220.7 299 45.2
HPP92_000418 Vanilla planifolia HOM05D003718 ORTHO05D004402 1.8e-51 208.4 659 29.0
SEGI_31370 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 2.9e-49 201.1 228 50.4
Actinidia09538 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.1e-48 199.1 157 66.9
Actinidia09536 Actinidia chinensis HOM05D003718 ORTHO05D004402 2.4e-48 198.0 262 48.1
FAN27G1677 Fragaria x ananassa HOM05D003718 ORTHO05D004402 8.1e-44 183.0 186 54.8
arahy.Tifrunner.gnm1.ann1.S1G2KX Arachis hypogaea HOM05D003718 ORTHO05D004402 6.0e-31 140.2 151 51.7
SHI09762 Sapria himalayana HOM05D003718 ORTHO05D004402 7.9e-31 139.8 189 46.0
CsaV3_UNG055460 Cucumis sativus L. HOM05D003718 ORTHO05D004402 1.3e-30 139.0 198 44.4
Psat6g086960 Pisum sativum HOM05D003718 ORTHO05D004402 2.5e-29 134.8 96 68.8
SMO367G0218 Selaginella moellendorffii HOM05D003718 ORTHO05D004402 1.5e-26 125.6 139 48.9
Actinidia09537 Actinidia chinensis HOM05D003718 ORTHO05D004402 2.0e-26 125.2 163 46.0
Actinidia25800 Actinidia chinensis HOM05D003718 ORTHO05D004402 4.9e-25 120.6 196 39.3
Actinidia30158 Actinidia chinensis HOM05D003718 ORTHO05D004402 2.5e-24 118.2 98 59.2
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 2.5e-24 118.2 92 66.3
arahy.Tifrunner.gnm1.ann1.6B4W14 Arachis hypogaea HOM05D003718 ORTHO05D004402 9.3e-24 116.3 79 73.4
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 2.1e-23 115.2 143 48.3
Cre08.g368450 Chlamydomonas reinhardtii HOM05D003718 ORTHO05D004402 5.3e-19 100.5 307 32.6
Psat6g087000 Pisum sativum HOM05D003718 ORTHO05D004402 1.1e-16 92.8 67 70.1
Lsat_1_v5_gn_4_881 Lactuca sativa HOM05D003718 ORTHO05D004402 1.2e-15 89.4 166 34.3
Lsat_1_v5_gn_3_107020 Lactuca sativa HOM05D003718 ORTHO05D004402 3.9e-14 84.3 107 43.0
Actinidia25801 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.1e-13 82.8 117 43.6
arahy.Tifrunner.gnm1.ann1.LM6F6Z Arachis hypogaea HOM05D003718 ORTHO05D004402 6.3e-12 77.0 115 40.9
Actinidia30157 Actinidia chinensis HOM05D003718 ORTHO05D057597 1.4e-11 75.9 86 47.7
Lsat_1_v5_gn_9_27880 Lactuca sativa HOM05D003718 ORTHO05D004402 1.2e-10 72.8 181 31.5
Gohir.A01G185580 Gossypium hirsutum HOM05D003718 ORTHO05D000087 2.3e-06 58.5 68 50.0


User provided reference genes

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