Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 9.4e-147 523.5 259 100.0
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 7.5e-144 513.8 259 98.5
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 3.6e-106 388.7 257 75.9
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 2.3e-100 369.4 254 71.7
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 1.5e-99 366.7 254 71.3
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.9e-99 366.3 251 72.1
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.9e-99 366.3 251 72.5
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.2e-98 363.6 257 70.0
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.6e-98 362.1 257 70.0
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.1e-97 360.5 249 71.9
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 1.8e-97 359.8 245 72.2
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 3.1e-97 359.0 247 70.4
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 5.2e-97 358.2 258 67.1
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 6.8e-97 357.8 254 66.9
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.5e-96 356.7 254 68.9
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 3.4e-96 355.5 245 71.4
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 7.6e-96 354.4 274 66.1
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 9.9e-96 354.0 254 68.5
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.3e-95 353.6 253 68.0
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 1.7e-95 353.2 257 67.3
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 4.9e-95 351.7 249 69.5
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 4.9e-95 351.7 257 67.3
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 1.1e-94 350.5 272 64.7
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 1.4e-94 350.1 257 67.7
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 1.9e-94 349.7 252 67.9
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 3.2e-94 349.0 257 67.3
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 4.2e-94 348.6 251 70.9
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 9.2e-94 347.4 254 67.7
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 9.2e-94 347.4 257 66.9
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.2e-93 347.1 242 69.0
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 2.7e-93 345.9 257 68.1
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 1.0e-92 344.0 252 68.3
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.3e-92 343.6 241 69.7
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 1.7e-92 343.2 257 65.4
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 2.3e-92 342.8 255 66.7
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 3.9e-92 342.0 255 66.7
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 5.1e-92 341.7 247 68.4
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 6.6e-92 341.3 257 64.6
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 8.7e-92 340.9 258 68.6
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 8.7e-92 340.9 265 66.0
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.3e-91 339.0 239 72.0
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 3.3e-91 339.0 255 67.1
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 4.3e-91 338.6 248 67.3
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 5.6e-91 338.2 257 64.2
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 5.6e-91 338.2 246 71.5
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 7.3e-91 337.8 253 66.0
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 2.8e-90 335.9 256 64.8
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 6.2e-90 334.7 255 65.1
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 8.1e-90 334.3 245 65.7
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 1.8e-89 333.2 260 66.2
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 2.4e-89 332.8 257 65.0
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 4.0e-89 332.0 261 62.8
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 5.3e-89 331.6 243 64.6
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 5.3e-89 331.6 243 64.6
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 5.3e-89 331.6 254 66.5
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 5.3e-89 331.6 243 66.7
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.2e-88 330.5 265 63.0
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 2.0e-88 329.7 236 69.1
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 2.6e-88 329.3 255 64.7
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 4.4e-88 328.6 243 64.2
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 5.8e-88 328.2 243 64.2
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 5.8e-88 328.2 260 62.7
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 9.9e-88 327.4 258 62.4
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 9.9e-88 327.4 249 63.5
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 2.2e-87 326.2 258 62.8
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 2.9e-87 325.9 259 64.5
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 6.4e-87 324.7 246 63.8
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 8.4e-87 324.3 241 66.0
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 8.4e-87 324.3 257 64.6
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 8.4e-87 324.3 252 63.9
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 8.4e-87 324.3 242 67.4
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 1.4e-86 323.6 247 65.2
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 3.2e-86 322.4 242 64.5
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 7.1e-86 321.2 257 64.2
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 9.3e-86 320.9 230 69.1
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 1.2e-85 320.5 234 65.8
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.6e-85 320.1 242 66.1
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.1e-85 319.7 230 68.7
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 2.7e-85 319.3 257 63.8
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 2.7e-85 319.3 243 63.8
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 4.6e-85 318.5 238 64.7
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 6.0e-85 318.2 261 60.2
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 7.8e-85 317.8 255 62.0
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 1.7e-84 316.6 236 65.3
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 3.0e-84 315.8 233 67.4
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 3.0e-84 315.8 245 64.5
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 5.1e-84 315.1 261 60.5
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 6.6e-84 314.7 245 64.1
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 3.3e-83 312.4 245 62.9
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 2.1e-82 309.7 252 61.1
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 1.3e-79 300.4 241 63.1
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 3.8e-79 298.9 272 58.1
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 2.1e-77 293.1 240 59.6
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 3.5e-77 292.4 237 62.0
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 1.3e-76 290.4 270 53.3
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.3e-76 289.7 221 67.9
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.4e-73 280.4 239 57.3
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.4e-70 270.4 234 59.0
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 9.3e-70 267.7 273 49.8
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 1.2e-69 267.3 220 60.5
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.8e-68 263.5 220 60.9
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 1.1e-67 260.8 170 75.3
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.5e-67 259.6 218 58.7
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 7.4e-67 258.1 220 60.0
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 1.3e-66 257.3 243 53.5
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 3.4e-64 249.2 258 51.9
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.9e-62 243.4 170 70.6
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 9.3e-62 241.1 195 63.1
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 7.9e-61 238.0 170 70.6
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 3.9e-60 235.7 170 65.9
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 3.3e-59 232.6 178 66.3
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 2.0e-56 223.4 234 49.1
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.9e-52 209.1 152 67.1
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 8.2e-50 201.4 236 45.3
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 5.9e-48 195.3 219 45.7
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.0e-44 183.0 138 68.1
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.1e-43 181.0 157 59.9
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 7.4e-43 178.3 117 71.8
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 2.0e-40 170.2 129 68.2
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 2.6e-40 169.9 182 50.5
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.8e-36 157.1 129 62.0
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.0e-35 153.7 129 61.2
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 7.4e-35 151.8 107 68.2
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 2.3e-28 130.2 137 48.9
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 1.5e-27 127.5 92 72.8
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 5.7e-27 125.6 138 48.6
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 3.7e-26 122.9 86 66.3
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.2e-23 113.6 83 65.1
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 6.5e-23 112.1 107 51.4
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 1.9e-22 110.5 98 59.2
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 1.9e-22 110.5 98 59.2
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 1.2e-19 101.3 86 55.8
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 3.7e-18 96.3 85 51.8
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 4.8e-18 95.9 241 29.9
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.4e-17 93.6 257 29.6
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 5.0e-07 59.3 73 43.8
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.3e-06 56.6 73 42.5
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.3e-06 56.6 73 42.5


User provided reference genes

Program Settings