Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 6.6e-105 384.0 193 100.0
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 6.6e-105 384.0 193 100.0
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 6.7e-73 277.7 190 71.1
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 2.2e-71 272.7 195 71.3
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 6.3e-71 271.2 190 72.1
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 1.1e-70 270.4 190 71.6
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 1.1e-70 270.4 190 69.5
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 1.8e-70 269.6 190 73.2
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 3.1e-70 268.9 190 71.1
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 4.1e-70 268.5 191 70.7
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 4.1e-70 268.5 192 72.4
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 6.9e-70 267.7 194 71.1
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 9.1e-70 267.3 196 70.9
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 1.2e-69 266.9 190 71.1
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 1.5e-69 266.5 191 72.8
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 2.6e-69 265.8 192 72.9
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 2.6e-69 265.8 190 70.5
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 5.9e-69 264.6 197 69.0
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 7.7e-69 264.2 192 71.9
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 1.0e-68 263.8 198 68.2
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 1.0e-68 263.8 198 68.2
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 1.0e-68 263.8 187 71.7
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 1.0e-68 263.8 190 70.0
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 1.7e-68 263.1 193 69.9
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 3.8e-68 261.9 191 70.7
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 3.8e-68 261.9 190 68.9
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 5.0e-68 261.5 197 68.0
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 5.0e-68 261.5 194 68.6
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 1.1e-67 260.4 191 68.1
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 1.1e-67 260.4 193 68.9
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 1.9e-67 259.6 194 67.5
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 2.5e-67 259.2 191 68.6
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 4.2e-67 258.5 187 69.0
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 7.2e-67 257.7 199 65.3
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 7.2e-67 257.7 197 67.5
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 9.4e-67 257.3 193 69.4
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 2.1e-66 256.1 203 65.0
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 2.1e-66 256.1 203 65.0
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 2.7e-66 255.8 192 68.8
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 2.7e-66 255.8 198 67.2
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 2.7e-66 255.8 198 65.7
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 6.1e-66 254.6 192 68.2
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 1.4e-65 253.4 193 68.9
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 1.8e-65 253.1 192 67.2
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 5.1e-65 251.5 198 66.2
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 6.7e-65 251.1 193 66.8
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 1.1e-64 250.4 186 68.3
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 1.1e-64 250.4 229 60.7
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 1.5e-64 250.0 190 64.7
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 2.6e-64 249.2 197 64.5
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 4.4e-64 248.4 189 69.3
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 1.3e-63 246.9 193 65.3
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 1.7e-63 246.5 189 66.1
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 4.8e-63 245.0 197 65.0
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 8.2e-63 244.2 193 65.3
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 1.4e-62 243.4 196 64.3
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 1.8e-62 243.0 194 64.4
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 3.1e-62 242.3 191 64.4
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 4.1e-62 241.9 196 63.3
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 4.1e-62 241.9 191 62.3
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 5.3e-62 241.5 190 63.2
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 5.3e-62 241.5 190 63.2
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 7.0e-62 241.1 190 63.2
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 1.2e-61 240.4 195 64.1
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 1.5e-61 240.0 190 62.6
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 2.6e-61 239.2 190 62.6
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 2.6e-61 239.2 188 67.0
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 7.7e-61 237.7 186 67.7
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 1.0e-60 237.3 194 59.8
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 1.0e-60 237.3 198 64.1
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 1.7e-60 236.5 190 62.6
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 1.7e-60 236.5 194 62.4
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 3.8e-60 235.3 194 60.3
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 3.8e-60 235.3 190 62.1
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 5.0e-60 235.0 191 62.8
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 6.5e-60 234.6 194 60.8
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 1.9e-59 233.0 209 62.2
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 5.5e-59 231.5 234 54.3
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 9.4e-59 230.7 190 61.1
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 9.4e-59 230.7 191 61.3
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 9.4e-59 230.7 185 64.9
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 1.2e-58 230.3 190 60.0
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 1.0e-57 227.3 193 60.1
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 1.0e-57 227.3 191 60.7
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 2.3e-57 226.1 197 62.4
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 6.7e-57 224.6 197 61.9
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 8.8e-57 224.2 197 61.9
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 1.7e-55 219.9 187 63.1
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 2.2e-55 219.5 192 59.9
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 4.8e-55 218.4 189 60.3
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 4.8e-55 218.4 187 62.0
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 4.8e-55 218.4 183 62.8
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 2.6e-53 212.6 276 46.4
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 1.7e-52 209.9 197 56.3
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 1.2e-50 203.8 198 57.6
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 1.8e-49 199.9 192 56.2
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 1.8e-49 199.9 192 57.8
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 3.0e-49 199.1 193 58.0
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 5.2e-49 198.4 196 57.1
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 6.8e-49 198.0 186 56.5
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 5.7e-48 194.9 193 53.9
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 5.7e-48 194.9 194 55.7
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 7.5e-48 194.5 193 53.9
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 9.7e-48 194.1 155 66.5
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 4.8e-47 191.8 194 54.6
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 1.8e-38 163.3 145 57.2
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 1.7e-31 140.2 182 47.8
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 4.1e-30 135.6 113 61.9
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 7.0e-30 134.8 180 42.8
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 6.6e-28 128.3 116 60.3
Mapoly0043s0113 Marchantia polymorpha HOM05D006871 ORTHO05D008544 1.4e-25 120.6 180 40.0
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 2.0e-24 116.7 113 58.4
MD05G1198200 Malus domestica HOM05D006871 ORTHO05D008544 1.4e-17 94.0 55 76.4
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 6.8e-17 91.7 119 48.7
Nitab4.5_0000119g0320 Nicotiana tabacum HOM05D006871 ORTHO05D008544 3.9e-12 75.9 42 78.6
CBR_g19096 Chara braunii HOM05D006871 ORTHO05D008544 6.6e-12 75.1 75 50.7
MD03G1286500 Malus domestica HOM05D006871 ORTHO05D008544 4.3e-11 72.4 38 89.5
Cre17.g726650 Chlamydomonas reinhardtii HOM05D006871 ORTHO05D008544 1.5e-08 63.9 188 29.8
MCO15G582 Micromonas commoda HOM05D006871 ORTHO05D008544 2.2e-07 60.1 202 28.2


User provided reference genes

Program Settings