Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2682 Papaver somniferum HOM05D004751 ORTHO05D005819 3.2e-164 581.6 286 100.0
PSO210G2464 Papaver somniferum HOM05D004751 ORTHO05D005819 3.9e-37 159.5 423 34.3
PSO210G3406 Papaver somniferum HOM05D004751 ORTHO05D005819 2.0e-36 157.1 423 34.3
COL.COLO4_34728 Corchorus olitorius HOM05D004751 ORTHO05D005819 1.0e-29 134.8 321 34.3
TAR626G1784 Trochodendron aralioides HOM05D004751 ORTHO05D005819 3.7e-27 126.3 406 31.0
TAR639G0003 Trochodendron aralioides HOM05D004751 ORTHO05D005819 3.7e-27 126.3 406 31.0
Dinv36677 Davidia involucrata HOM05D004751 ORTHO05D005819 1.4e-26 124.4 377 32.9
arahy.Tifrunner.gnm1.ann1.11NKIJ Arachis hypogaea HOM05D004751 ORTHO05D005819 3.5e-25 119.8 419 29.8
arahy.Tifrunner.gnm1.ann1.U02M06 Arachis hypogaea HOM05D004751 ORTHO05D005819 3.5e-25 119.8 419 29.8
GSVIVG01015287001 Vitis vinifera HOM05D004751 ORTHO05D005819 7.7e-25 118.6 419 30.5
Lsat_1_v5_gn_7_39580 Lactuca sativa HOM05D004751 ORTHO05D005819 2.9e-24 116.7 419 27.4
Atru.chr7.1477 Acer truncatum HOM05D004751 ORTHO05D005819 6.5e-24 115.5 419 28.6
TAR383G0360 Trochodendron aralioides HOM05D004751 ORTHO05D005819 8.5e-24 115.2 425 29.4
MBI15_g07764_MAGBIO Magnolia biondii HOM05D004751 ORTHO05D005819 2.5e-23 113.6 420 31.2
Prupe.2G065200 Prunus persica HOM05D004751 ORTHO05D005819 4.2e-23 112.8 421 30.2
Dinv42256 Davidia involucrata HOM05D004751 ORTHO05D005819 5.5e-23 112.5 418 29.2
RcHm_v2.0_Chr1g0331571 Rosa chinensis HOM05D004751 ORTHO05D005819 9.4e-23 111.7 419 29.6
Lalb_Chr14g0371941 Lupinus albus HOM05D004751 ORTHO05D005819 1.2e-22 111.3 162 46.9
CSS0000434 Camellia sinensis var. sinensis HOM05D004751 ORTHO05D005819 2.1e-22 110.5 421 29.0
CSS0026223 Camellia sinensis var. sinensis HOM05D004751 ORTHO05D005819 2.1e-22 110.5 421 29.0
Thecc.09G099100 Theobroma cacao HOM05D004751 ORTHO05D005819 2.7e-22 110.2 398 29.9
Lj2g0020264 Lotus japonicus HOM05D004751 ORTHO05D005819 3.6e-22 109.8 208 40.4
Ciclev10007242m.g Citrus clementina HOM05D004751 ORTHO05D005819 6.1e-22 109.0 209 39.2
MD07G1058300 Malus domestica HOM05D004751 ORTHO05D005819 6.1e-22 109.0 419 28.6
FvH4_7g05110 Fragaria vesca HOM05D004751 ORTHO05D005819 8.0e-22 108.6 419 29.6
Phvul.004G175100 Phaseolus vulgaris HOM05D004751 ORTHO05D005819 1.4e-21 107.8 208 39.4
Aqoxy7G03607 Aquilegia oxysepala HOM05D004751 ORTHO05D005819 1.8e-21 107.5 418 28.0
Eucgr.C03719 Eucalyptus grandis HOM05D004751 ORTHO05D005819 1.8e-21 107.5 419 27.2
MD02G1262100 Malus domestica HOM05D004751 ORTHO05D005819 3.0e-21 106.7 417 28.5
FAN06G4551 Fragaria x ananassa HOM05D004751 ORTHO05D005819 4.0e-21 106.3 419 29.4
Gohir.D05G027800 Gossypium hirsutum HOM05D004751 ORTHO05D005819 4.0e-21 106.3 400 30.2
Gorai.009G028000 Gossypium raimondii HOM05D004751 ORTHO05D005819 4.0e-21 106.3 400 30.2
QL02p040907 Quercus lobata HOM05D004751 ORTHO05D005819 4.0e-21 106.3 426 28.6
VMungo0464G0426 Vigna mungo HOM05D004751 ORTHO05D005819 4.0e-21 106.3 209 39.2
Sed0000923 Sechium edule HOM05D004751 ORTHO05D005819 5.2e-21 105.9 425 27.1
Gohir.A05G026300 Gossypium hirsutum HOM05D004751 ORTHO05D005819 6.8e-21 105.5 400 30.0
Nitab4.5_0015727g0010 Nicotiana tabacum HOM05D004751 ORTHO05D005819 6.8e-21 105.5 158 43.0
Solyc04g012170.4 Solanum lycopersicum HOM05D004751 ORTHO05D005819 8.8e-21 105.1 158 43.0
Sopen04g006260 Solanum pennellii HOM05D004751 ORTHO05D005819 8.8e-21 105.1 158 43.0
Actinidia17515 Actinidia chinensis HOM05D004751 ORTHO05D005819 1.2e-20 104.8 427 27.6
Glyma.07G125200 Glycine max HOM05D004751 ORTHO05D005819 1.2e-20 104.8 209 39.2
Hma1.2p1_0012F.1_g007400 Hydrangea macrophylla HOM05D004751 ORTHO05D005819 1.5e-20 104.4 158 43.0
Nitab4.5_0001242g0100 Nicotiana tabacum HOM05D004751 ORTHO05D005819 2.0e-20 104.0 158 42.4
PGSC0003DMG400023589 Solanum tuberosum HOM05D004751 ORTHO05D005819 2.0e-20 104.0 158 43.0
Glyma.01G006600 Glycine max HOM05D004751 ORTHO05D005819 2.6e-20 103.6 162 46.3
TPR.G31000 Trifolium pratense HOM05D004751 ORTHO05D005819 2.6e-20 103.6 209 38.8
HanXRQChr03g0061061 Helianthus annuus HOM05D004751 ORTHO05D005819 3.4e-20 103.2 156 44.2
CAN.G787.12 Capsicum annuum HOM05D004751 ORTHO05D005819 4.4e-20 102.8 158 43.0
Duzib150G1241 Durio zibethinus HOM05D004751 ORTHO05D005819 9.8e-20 101.7 147 46.3
ECA240G2374 Erigeron canadensis HOM05D004751 ORTHO05D005819 9.8e-20 101.7 412 27.9
Psat1g048040 Pisum sativum HOM05D004751 ORTHO05D005819 1.3e-19 101.3 197 40.1
Lj7C667T4 Lonicera japonica HOM05D004751 ORTHO05D005819 1.7e-19 100.9 162 42.6
arahy.Tifrunner.gnm1.ann1.YRLX64 Arachis hypogaea HOM05D004751 ORTHO05D005819 2.2e-19 100.5 158 43.0
SalBow1G2004 Salvia bowleyana HOM05D004751 ORTHO05D005819 2.2e-19 100.5 416 25.2
TWI34G0109 Tripterygium wilfordii HOM05D004751 ORTHO05D005819 2.2e-19 100.5 203 37.9
TWI32G0016 Tripterygium wilfordii HOM05D004751 ORTHO05D005819 2.8e-19 100.1 203 37.4
Migut.K00548 Erythranthe guttata HOM05D004751 ORTHO05D005819 3.7e-19 99.8 427 26.9
Rhsim05G0038900 Rhododendron simsii HOM05D004751 ORTHO05D005819 3.7e-19 99.8 173 41.6
CDE04G1922 Ceratophyllum demersum HOM05D004751 ORTHO05D005819 4.8e-19 99.4 232 38.4
Ah.09g230480 Amaranthus hybridus HOM05D004751 ORTHO05D005819 6.3e-19 99.0 157 42.7
FAN01G0060 Fragaria x ananassa HOM05D004751 ORTHO05D005819 8.3e-19 98.6 203 38.4
SGA_v2.0_scaffold19G08722 Striga asiatica HOM05D004751 ORTHO05D005819 1.1e-18 98.2 395 27.1
Haze_25834 Corylus avellana HOM05D004751 ORTHO05D005819 1.4e-18 97.8 178 41.0
vmacro10847 Vaccinium macrocarpon HOM05D004751 ORTHO05D005819 1.4e-18 97.8 162 43.2
Ca_25582_v3 Cicer arietinum L. HOM05D004751 ORTHO05D005819 1.8e-18 97.4 209 38.3
Ca_25581_v3 Cicer arietinum L. HOM05D004751 ORTHO05D005819 2.4e-18 97.1 317 29.0
Cfa003165 Carpinus fangiana HOM05D004751 ORTHO05D005819 3.1e-18 96.7 178 40.4
Oeu021455.1 Olea europaea HOM05D004751 ORTHO05D005819 3.1e-18 96.7 161 40.4
EL10Ac8g18369 Beta vulgaris HOM05D004751 ORTHO05D005819 4.1e-18 96.3 173 40.5
CiPaw.03G223300 Carya illinoinensis HOM05D004751 ORTHO05D005819 4.1e-18 96.3 163 41.7
Sabra06G0121300 Salix brachista HOM05D004751 ORTHO05D005819 4.1e-18 96.3 316 26.9
DCAR_028653 Daucus carota HOM05D004751 ORTHO05D005819 5.4e-18 95.9 156 40.4
Medtr6g088835 Medicago truncatula HOM05D004751 ORTHO05D005819 5.4e-18 95.9 209 37.8
arahy.Tifrunner.gnm1.ann1.9BR2YY Arachis hypogaea HOM05D004751 ORTHO05D005819 9.1e-18 95.1 158 41.1
Cpa.g.sc78.25 Carica papaya HOM05D004751 ORTHO05D005819 9.1e-18 95.1 156 41.7
PGR102G2506 Punica granatum HOM05D004751 ORTHO05D005819 1.2e-17 94.7 317 27.8
Manes.16G108000 Manihot esculenta HOM05D004751 ORTHO05D005819 2.0e-17 94.0 205 37.1
ClCG03G016070 Citrullus lanatus HOM05D004751 ORTHO05D005819 2.7e-17 93.6 207 36.2
MELO3C015420.2 Cucumis melo HOM05D004751 ORTHO05D005819 2.7e-17 93.6 207 36.2
CsaV3_1G039890 Cucumis sativus L. HOM05D004751 ORTHO05D005819 2.7e-17 93.6 207 36.2
ATR0730G043 Amborella trichopoda HOM05D004751 ORTHO05D005819 7.7e-17 92.0 142 42.3
Cc06_g10590 Coffea canephora HOM05D004751 ORTHO05D005819 7.7e-17 92.0 137 40.9
Hund26286 Selenicereus undatus HOM05D004751 ORTHO05D005819 1.7e-16 90.9 173 38.2
unitig_8.g4485 Utricularia gibba HOM05D004751 ORTHO05D005819 1.7e-16 90.9 417 26.6
AUR62021393 Chenopodium quinoa HOM05D004751 ORTHO05D005819 2.9e-16 90.1 81 54.3
Oeu018580.2 Olea europaea HOM05D004751 ORTHO05D005819 2.9e-16 90.1 164 36.6
Lsat_1_v5_gn_0_39700 Lactuca sativa HOM05D004751 ORTHO05D005819 3.8e-16 89.7 82 52.4
MSTRG.26388 Avicennia marina HOM05D004751 ORTHO05D005819 4.2e-15 86.3 135 38.5
AUR62010880 Chenopodium quinoa HOM05D004751 ORTHO05D005819 4.2e-15 86.3 81 53.1
Sc08g0008060 Simmondsia chinensis HOM05D004751 ORTHO05D005819 5.5e-15 85.9 104 43.3
RcHm_v2.0_Chr1g0332481 Rosa chinensis HOM05D004751 ORTHO05D005819 7.2e-15 85.5 67 56.7
CANSAT56G3494 Cannabis sativa HOM05D004751 ORTHO05D005819 1.2e-14 84.7 145 40.7
Potri.006G153100 Populus trichocarpa HOM05D004751 ORTHO05D005819 1.2e-14 84.7 66 60.6
Hund09091 Selenicereus undatus HOM05D004751 ORTHO05D005819 2.1e-14 84.0 102 46.1
AT4G29380 Arabidopsis thaliana HOM05D004751 ORTHO05D005819 3.6e-14 83.2 146 37.0
AL7G23020 Arabidopsis lyrata HOM05D004751 ORTHO05D005819 8.0e-14 82.0 186 32.8
Thhalv10024212m.g Eutrema salsugineum HOM05D004751 ORTHO05D005819 3.0e-13 80.1 181 37.6
Sp7g27250 Schrenkiella parvula HOM05D004751 ORTHO05D005819 8.8e-13 78.6 146 36.3
Carub.0007s1117 Capsella rubella HOM05D004751 ORTHO05D005819 4.4e-12 76.3 150 36.7
THA.LOC104814595 Tarenaya hassleriana HOM05D004751 ORTHO05D005819 7.5e-12 75.5 99 41.4
Zm00001eb257890 Zea mays HOM05D004751 ORTHO05D005819 1.8e-10 70.9 60 53.3
Aa31LG2G21070 Aethionema arabicum HOM05D004751 ORTHO05D005819 3.1e-10 70.1 68 44.1
BcaC09g51723 Brassica carinata HOM05D004751 ORTHO05D005819 4.1e-10 69.7 146 34.9
C01p10120 Brassica napus HOM05D004751 ORTHO05D005819 4.1e-10 69.7 147 35.4
BolC1t00970H Brassica oleracea HOM05D004751 ORTHO05D005819 4.1e-10 69.7 147 35.4
A01p08650 Brassica napus HOM05D004751 ORTHO05D005819 5.4e-10 69.3 147 35.4
Peaxi162Scf01157g00011 Petunia axillaris HOM05D004751 ORTHO05D005819 5.4e-10 69.3 157 36.9
BraA01t00815Z Brassica rapa HOM05D004751 ORTHO05D005819 1.2e-09 68.2 147 34.7
Os02g0796700 Oryza sativa ssp. japonica HOM05D004751 ORTHO05D005819 5.0e-08 62.8 83 38.6
AagrBONN_evm.TU.Sc2ySwM_228.4976 Anthoceros agrestis HOM05D004751 ORTHO05D005819 2.5e-07 60.5 155 31.0
Zm00001eb192340 Zea mays HOM05D004751 ORTHO05D005819 3.3e-07 60.1 53 52.8
CARHR237190 Cardamine hirsuta HOM05D004751 ORTHO05D005819 9.5e-07 58.5 35 68.6
SEGI_30648 Sequoiadendron giganteum HOM05D004751 ORTHO05D005819 1.2e-06 58.2 55 47.3
SHI02649 Sapria himalayana HOM05D004751 ORTHO05D005819 2.8e-06 57.0 36 63.9
Mapoly0002s0158 Marchantia polymorpha HOM05D004751 ORTHO05D005819 6.1e-06 55.8 150 32.7


User provided reference genes

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