Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 8.0e-106 387.1 197 100.0
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 4.3e-99 364.8 200 95.0
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 2.5e-46 189.5 201 54.7
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 6.7e-44 181.4 204 50.5
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 3.4e-40 169.1 207 46.4
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 4.5e-40 168.7 210 47.6
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 2.9e-39 166.0 201 46.3
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 3.8e-39 165.6 206 48.1
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 1.9e-38 163.3 200 48.0
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 4.2e-38 162.2 205 46.3
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 4.2e-38 162.2 214 45.3
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 9.3e-38 161.0 206 47.6
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 1.6e-37 160.2 221 45.2
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 1.6e-37 160.2 206 46.6
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.7e-37 159.5 207 46.4
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 3.5e-37 159.1 215 47.4
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 1.0e-36 157.5 209 45.0
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 1.0e-36 157.5 208 44.7
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.3e-36 157.1 209 44.5
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.8e-36 156.8 203 45.8
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 2.3e-36 156.4 202 45.0
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 2.3e-36 156.4 208 46.6
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 3.9e-36 155.6 214 44.4
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 5.1e-36 155.2 139 56.1
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 1.5e-35 153.7 200 48.0
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 1.9e-35 153.3 206 44.7
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 3.3e-35 152.5 216 44.9
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 4.3e-35 152.1 206 45.6
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 4.3e-35 152.1 142 54.9
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 5.7e-35 151.8 208 44.7
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 7.4e-35 151.4 212 45.8
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 9.7e-35 151.0 211 44.5
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 1.6e-34 150.2 206 45.1
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 2.8e-34 149.4 188 45.7
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 2.8e-34 149.4 206 44.7
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 3.7e-34 149.1 206 44.2
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 6.3e-34 148.3 180 50.0
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.1e-33 147.5 205 45.4
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.1e-33 147.5 210 44.8
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 1.8e-33 146.7 208 42.3
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 5.3e-33 145.2 207 44.4
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 5.3e-33 145.2 152 56.6
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 1.5e-32 143.7 235 40.9
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 3.4e-32 142.5 211 45.5
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 3.4e-32 142.5 216 43.1
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 5.9e-32 141.7 203 44.3
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 1.3e-31 140.6 221 43.9
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.7e-31 140.2 201 42.8
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.7e-31 140.2 147 51.7
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 2.2e-31 139.8 208 43.8
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 2.9e-31 139.4 229 41.5
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 2.9e-31 139.4 211 41.2
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 2.9e-31 139.4 216 43.1
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 5.0e-31 138.7 217 43.3
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 5.0e-31 138.7 217 43.3
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 6.5e-31 138.3 217 42.9
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 8.5e-31 137.9 222 41.0
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 1.4e-30 137.1 208 42.8
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.4e-30 137.1 158 48.7
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 1.9e-30 136.7 213 42.7
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.5e-30 136.3 212 43.4
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 2.5e-30 136.3 217 37.8
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 3.2e-30 136.0 195 42.1
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 4.2e-30 135.6 212 42.9
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 7.2e-30 134.8 208 43.3
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 7.2e-30 134.8 148 53.4
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 9.4e-30 134.4 203 43.8
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 9.4e-30 134.4 219 43.8
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 1.2e-29 134.0 222 43.7
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.2e-29 134.0 203 43.3
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 1.6e-29 133.7 217 41.9
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 2.1e-29 133.3 217 42.9
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 2.1e-29 133.3 220 39.1
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 6.1e-29 131.7 212 42.9
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 1.4e-28 130.6 217 36.9
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.4e-28 130.6 217 36.9
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 2.3e-28 129.8 220 39.1
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 2.3e-28 129.8 216 41.7
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 3.0e-28 129.4 261 35.6
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 5.1e-28 128.6 235 35.7
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 3.3e-27 125.9 220 41.8
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 4.3e-27 125.6 217 40.1
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 9.7e-27 124.4 216 38.9
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 4.8e-26 122.1 167 46.1
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 6.3e-26 121.7 179 40.8
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 1.4e-25 120.6 208 40.4
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 4.1e-25 119.0 196 40.3
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 9.1e-25 117.9 157 43.3
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 2.0e-24 116.7 211 38.9
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 1.7e-23 113.6 224 35.7
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 2.9e-23 112.8 216 37.0
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 5.0e-23 112.1 226 38.5
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 5.0e-23 112.1 212 39.2
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 1.4e-22 110.5 141 46.1
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 3.2e-22 109.4 153 43.8
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 7.2e-22 108.2 181 44.2
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 2.6e-19 99.8 135 45.2
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.9e-15 86.3 145 40.7
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.5e-14 83.2 131 42.0
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 4.2e-14 82.4 115 46.1
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 7.2e-14 81.6 94 46.8
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 9.7e-11 71.2 88 51.1
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 1.4e-09 67.4 83 44.6
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 1.9e-06 57.0 154 27.9


User provided reference genes

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