Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 0.0e+00 1316.2 715 100.0
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 0.0e+00 1242.6 715 94.3
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 1.8e-200 703.4 721 54.5
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 4.1e-184 649.0 724 50.7
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 4.7e-180 635.6 714 49.3
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 8.6e-174 614.8 698 49.1
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 2.0e-170 603.6 704 48.7
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 4.4e-170 602.4 642 50.8
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 2.9e-169 599.7 684 47.8
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 1.6e-164 583.9 669 48.7
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 1.6e-164 583.9 720 47.1
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 4.7e-164 582.4 696 47.0
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 8.0e-164 581.6 717 46.3
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 4.4e-162 575.9 714 47.5
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 5.8e-162 575.5 714 47.5
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 1.3e-161 574.3 669 48.3
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 1.7e-161 573.9 696 46.0
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 2.9e-161 573.2 700 45.1
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 8.3e-161 571.6 703 45.2
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 5.4e-160 568.9 704 46.3
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 9.2e-160 568.2 662 46.8
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 2.0e-159 567.0 683 48.2
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.7e-158 563.9 682 47.2
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 2.3e-158 563.5 669 46.6
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 3.9e-158 562.8 679 45.9
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 5.6e-157 558.9 700 44.0
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 3.6e-156 556.2 693 45.7
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 2.3e-155 553.5 677 47.0
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 1.2e-154 551.2 660 46.4
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 1.2e-154 551.2 689 44.8
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 1.3e-153 547.7 656 47.0
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 1.7e-153 547.4 719 43.5
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 2.2e-153 547.0 693 44.7
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 2.9e-153 546.6 711 43.7
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 2.4e-152 543.5 670 45.1
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.2e-151 541.2 575 52.3
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 3.5e-151 539.7 683 44.8
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 6.0e-151 538.9 691 45.0
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 2.5e-149 533.5 671 44.3
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 5.6e-149 532.3 685 44.1
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 3.6e-148 529.6 670 44.6
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 4.7e-148 529.3 690 44.2
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 1.4e-147 527.7 694 43.7
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 1.4e-147 527.7 693 43.1
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 2.4e-147 526.9 706 42.2
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 2.0e-146 523.9 674 43.9
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 7.6e-146 521.9 692 43.4
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 1.7e-145 520.8 674 43.9
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 2.2e-145 520.4 675 43.0
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 3.8e-145 519.6 692 42.9
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 4.9e-145 519.2 692 43.4
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 1.9e-144 517.3 696 43.1
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 4.1e-144 516.2 669 43.6
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 5.4e-144 515.8 692 42.6
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 9.2e-144 515.0 523 51.4
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 2.7e-143 513.5 680 43.8
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 4.6e-143 512.7 669 44.2
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 4.6e-143 512.7 715 41.3
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.0e-142 511.5 693 43.1
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 1.7e-142 510.8 686 43.0
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 1.7e-142 510.8 675 43.9
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 2.3e-142 510.4 718 42.1
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 5.1e-142 509.2 676 43.3
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 7.3e-141 505.4 695 41.7
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 7.3e-141 505.4 700 41.7
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 9.6e-141 505.0 676 43.2
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 9.6e-141 505.0 709 42.9
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.6e-140 504.2 698 43.6
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 4.7e-140 502.7 688 43.2
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 2.4e-139 500.4 662 44.3
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 3.1e-139 500.0 663 44.0
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 3.4e-138 496.5 685 42.5
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 4.3e-133 479.6 692 41.9
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 2.1e-132 477.2 763 38.9
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.8e-131 474.2 425 56.7
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 6.9e-131 472.2 663 41.6
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 1.2e-130 471.5 708 39.4
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 4.2e-128 463.0 698 41.3
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 2.1e-127 460.7 542 47.0
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 1.4e-123 448.0 689 39.9
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 1.3e-121 441.4 498 48.2
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 7.4e-117 425.6 421 51.8
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 1.4e-115 421.4 683 40.0
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 1.5e-114 417.9 682 37.7
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 3.4e-114 416.8 412 51.2
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 1.3e-113 414.8 457 49.7
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 1.6e-111 407.9 576 41.3
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 1.3e-110 404.8 508 42.7
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 3.3e-109 400.2 547 43.0
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 1.4e-107 394.8 400 51.5
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 2.4e-107 394.0 402 52.2
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 5.3e-107 392.9 374 53.2
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 1.5e-106 391.3 650 36.6
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 1.1e-104 385.2 673 37.1
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 5.5e-104 382.9 506 42.1
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 5.1e-102 376.3 678 38.3
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 1.3e-100 371.7 667 37.6
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 1.0e-97 362.1 425 47.3
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 2.6e-90 337.4 506 39.7
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 1.3e-89 335.1 645 34.0
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 7.7e-82 309.3 645 33.0
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 1.0e-70 272.3 297 49.8
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 7.0e-59 233.0 657 25.7
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 2.6e-53 214.5 253 48.2
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 9.5e-40 169.5 670 25.7
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 6.6e-33 146.7 302 33.4
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.4e-30 139.0 215 38.1
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 9.2e-27 126.3 288 30.2
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.0e-25 122.9 368 29.6
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.1e-24 119.4 360 28.1
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 8.1e-23 113.2 88 67.0
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 2.2e-20 105.1 303 26.7
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 1.1e-19 102.8 320 26.9
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 1.4e-19 102.4 232 31.9
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.0e-17 96.3 75 61.3
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 6.2e-15 87.0 77 55.8
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 5.3e-14 84.0 84 54.8
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.4e-11 75.9 73 49.3
MBI05_g22668_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.9e-11 75.5 80 47.5
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 3.2e-11 74.7 86 46.5
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 1.9e-08 65.5 49 61.2
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 3.3e-08 64.7 66 43.9


User provided reference genes

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