Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2574 Papaver somniferum HOM05D001890 ORTHO05D003442 2.3e-94 349.0 185 100.0
PSO384G4950 Papaver somniferum HOM05D001890 ORTHO05D003442 8.4e-65 250.8 207 67.6
PSO339G5959 Papaver somniferum HOM05D001890 ORTHO05D003442 1.4e-64 250.0 207 67.1
PSO063G7439 Papaver somniferum HOM05D001890 ORTHO05D003442 6.2e-60 234.6 184 71.7
PSO063G3472 Papaver somniferum HOM05D001890 ORTHO05D003442 3.1e-51 205.7 207 59.4
TAR369G0675 Trochodendron aralioides HOM05D001890 ORTHO05D003442 5.7e-29 131.7 188 46.8
Dinv11882 Davidia involucrata HOM05D001890 ORTHO05D003442 2.8e-28 129.4 207 44.4
Dinv24078 Davidia involucrata HOM05D002807 ORTHO05D003442 4.1e-27 125.6 205 43.4
Hma1.2p1_0969F.1_g242598 Hydrangea macrophylla HOM05D001890 ORTHO05D003442 8.5e-25 117.9 181 43.6
Aqoxy1G00604 Aquilegia oxysepala HOM05D001890 ORTHO05D003442 1.1e-24 117.5 216 42.6
Hma1.2p1_2851F.1_g329440 Hydrangea macrophylla HOM05D001890 ORTHO05D003442 1.1e-24 117.5 181 43.6
CSS0016780 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D003442 1.2e-21 107.5 205 39.0
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 3.3e-21 105.9 208 38.5
QL07p026881 Quercus lobata HOM05D001890 ORTHO05D003442 5.7e-21 105.1 218 36.2
Haze_20107 Corylus avellana HOM05D001890 ORTHO05D003442 1.3e-20 104.0 202 35.6
Peaxi162Scf00203g00101 Petunia axillaris HOM05D001890 ORTHO05D003442 1.3e-20 104.0 189 39.7
Cc01_g02980 Coffea canephora HOM05D001890 ORTHO05D003442 2.8e-20 102.8 202 39.6
Lsat_1_v5_gn_6_34701 Lactuca sativa HOM05D001890 ORTHO05D003442 3.7e-20 102.4 176 41.5
Nn2g14393 Nelumbo nucifera HOM05D001890 ORTHO05D003442 8.2e-20 101.3 208 39.9
DCAR_013449 Daucus carota HOM05D001890 ORTHO05D003442 1.1e-19 100.9 191 40.8
Cc01_g03030 Coffea canephora HOM05D001890 ORTHO05D003442 1.4e-19 100.5 202 40.1
Cfa020085 Carpinus fangiana HOM05D001890 ORTHO05D003442 1.8e-19 100.1 202 35.6
Cc06_g06840 Coffea canephora HOM05D001890 ORTHO05D003442 2.4e-19 99.8 201 39.8
Solyc10g081770.3 Solanum lycopersicum HOM05D001890 ORTHO05D003442 3.1e-19 99.4 171 39.8
CAN.G674.15 Capsicum annuum HOM05D001890 ORTHO05D003442 4.1e-19 99.0 182 39.0
Nn6g34599 Nelumbo nucifera HOM05D001890 ORTHO05D003442 4.1e-19 99.0 209 39.2
Thhalv10013326m.g Eutrema salsugineum HOM05D001890 ORTHO05D003442 7.0e-19 98.2 171 40.9
Prupe.7G091200 Prunus persica HOM05D001890 ORTHO05D003442 7.0e-19 98.2 210 35.7
PGSC0003DMG400028231 Solanum tuberosum HOM05D001890 ORTHO05D003442 1.2e-18 97.4 171 39.8
GSVIVG01022534001 Vitis vinifera HOM05D001890 ORTHO05D003442 1.2e-18 97.4 171 37.4
Thecc.05G108400 Theobroma cacao HOM05D001890 ORTHO05D003442 1.6e-18 97.1 193 37.3
CARHR206750 Cardamine hirsuta HOM05D001890 ORTHO05D003442 2.7e-18 96.3 177 39.0
CANSAT64G0653 Cannabis sativa HOM05D001890 ORTHO05D003442 3.5e-18 95.9 195 36.4
Sopen10g032280 Solanum pennellii HOM05D001890 ORTHO05D003442 3.5e-18 95.9 171 39.2
Aa31LG3G5200 Aethionema arabicum HOM05D001890 ORTHO05D003442 4.5e-18 95.5 176 39.2
Nitab4.5_0000721g0220 Nicotiana tabacum HOM05D001890 ORTHO05D003442 5.9e-18 95.1 190 35.8
Phvul.007G266400 Phaseolus vulgaris HOM05D001890 ORTHO05D003442 5.9e-18 95.1 198 38.9
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 7.7e-18 94.7 217 34.1
Eucgr.A02559 Eucalyptus grandis HOM05D001890 ORTHO05D003442 1.3e-17 94.0 200 37.0
AL6G16530 Arabidopsis lyrata HOM05D001890 ORTHO05D003442 2.9e-17 92.8 169 37.9
Manes.08G036000 Manihot esculenta HOM05D001890 ORTHO05D003442 2.9e-17 92.8 180 40.0
COL.COLO4_29518 Corchorus olitorius HOM05D001890 ORTHO05D003442 3.8e-17 92.4 221 33.5
Duzib128G1367 Durio zibethinus HOM05D001890 ORTHO05D003442 6.5e-17 91.7 193 36.8
PGSC0003DMG400021336 Solanum tuberosum HOM05D001890 ORTHO05D003442 1.1e-16 90.9 223 34.5
CiPaw.09G022800 Carya illinoinensis HOM05D001890 ORTHO05D003442 1.5e-16 90.5 201 35.3
Lj1A1058T56 Lonicera japonica HOM05D001890 ORTHO05D003442 1.5e-16 90.5 211 36.0
Duzib093G1618 Durio zibethinus HOM05D001890 ORTHO05D003442 1.9e-16 90.1 193 36.8
Gohir.D01G122600 Gossypium hirsutum HOM05D001890 ORTHO05D003442 2.5e-16 89.7 194 37.6
Gorai.002G153500 Gossypium raimondii HOM05D001890 ORTHO05D003442 3.2e-16 89.4 194 39.2
Carub.0006s0532 Capsella rubella HOM05D001890 ORTHO05D003442 4.2e-16 89.0 164 36.6
Actinidia06190 Actinidia chinensis HOM05D001890 ORTHO05D003442 7.2e-16 88.2 187 39.0
AT5G06440 Arabidopsis thaliana HOM05D001890 ORTHO05D003442 7.2e-16 88.2 169 35.5
Sp6g36420 Schrenkiella parvula HOM05D001890 ORTHO05D003442 7.2e-16 88.2 164 37.8
EL10Ac5g11825 Beta vulgaris HOM05D001890 ORTHO05D003442 9.4e-16 87.8 207 33.8
AUR62030696 Chenopodium quinoa HOM05D001890 ORTHO05D003442 9.4e-16 87.8 175 38.3
ECA233G4742 Erigeron canadensis HOM05D001890 ORTHO05D003442 9.4e-16 87.8 176 35.2
Os11g0568700 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D003442 1.2e-15 87.4 170 38.8
TAR623G0995 Trochodendron aralioides HOM05D001890 ORTHO05D003442 1.2e-15 87.4 158 38.6
CiPaw.10G019600 Carya illinoinensis HOM05D001890 ORTHO05D003442 2.1e-15 86.7 207 34.3
A10p29950 Brassica napus HOM05D001890 ORTHO05D003442 2.7e-15 86.3 169 40.8
BraA10t45034Z Brassica rapa HOM05D001890 ORTHO05D003442 2.7e-15 86.3 169 40.8
Gorai.006G147700 Gossypium raimondii HOM05D001890 ORTHO05D003442 2.7e-15 86.3 200 34.5
SGA_v2.0_scaffold31G12814 Striga asiatica HOM05D001890 ORTHO05D003442 2.7e-15 86.3 179 33.5
Manes.09G043100 Manihot esculenta HOM05D001890 ORTHO05D003442 3.6e-15 85.9 238 34.0
Gohir.D09G129000 Gossypium hirsutum HOM05D001890 ORTHO05D003442 4.7e-15 85.5 200 34.5
MD14G1042900 Malus domestica HOM05D001890 ORTHO05D003442 4.7e-15 85.5 207 33.8
PGR004G2025 Punica granatum HOM05D001890 ORTHO05D003442 4.7e-15 85.5 196 35.7
Gohir.A09G132700 Gossypium hirsutum HOM05D001890 ORTHO05D003442 6.1e-15 85.1 200 35.0
THA.LOC104826799 Tarenaya hassleriana HOM05D001890 ORTHO05D003442 6.1e-15 85.1 187 34.2
Actinidia07949 Actinidia chinensis HOM05D001890 ORTHO05D003442 8.0e-15 84.7 227 32.2
Solyc01g006870.4 Solanum lycopersicum HOM05D001890 ORTHO05D003442 8.0e-15 84.7 223 30.9
HanXRQChr02g0053331 Helianthus annuus HOM05D001890 ORTHO05D003442 1.0e-14 84.3 171 36.8
Nitab4.5_0001918g0040 Nicotiana tabacum HOM05D001890 ORTHO05D003442 1.0e-14 84.3 182 35.2
Sopen01g002860 Solanum pennellii HOM05D001890 ORTHO05D003442 1.0e-14 84.3 223 30.9
BcaC06g32374 Brassica carinata HOM05D001890 ORTHO05D003442 1.4e-14 84.0 168 39.9
MD12G1043900 Malus domestica HOM05D001890 ORTHO05D003442 1.4e-14 84.0 203 33.0
Lalb_Chr20g0111261 Lupinus albus HOM05D001890 ORTHO05D003442 1.8e-14 83.6 185 34.6
Oeu020167.1 Olea europaea HOM05D001890 ORTHO05D003442 2.3e-14 83.2 197 33.5
BcaC06g32575 Brassica carinata HOM05D001890 ORTHO05D003442 3.0e-14 82.8 170 37.1
CAN.G911.29 Capsicum annuum HOM05D001890 ORTHO05D003442 3.0e-14 82.8 259 30.9
Sed0025654 Sechium edule HOM05D001890 ORTHO05D003442 3.0e-14 82.8 196 36.2
C09p70360 Brassica napus HOM05D001890 ORTHO05D003442 4.0e-14 82.4 168 39.9
Ca_09069_v3 Cicer arietinum L. HOM05D001890 ORTHO05D003442 4.0e-14 82.4 80 53.8
Psat6g097960 Pisum sativum HOM05D001890 ORTHO05D003442 4.0e-14 82.4 179 37.4
ClCG10G018130 Citrullus lanatus HOM05D001890 ORTHO05D003442 5.2e-14 82.0 204 36.3
Psat1g223320 Pisum sativum HOM05D001890 ORTHO05D003442 5.2e-14 82.0 179 37.4
TWI77G0744 Tripterygium wilfordii HOM05D001890 ORTHO05D003442 5.2e-14 82.0 228 32.0
BolC9t59781H Brassica oleracea HOM05D001890 ORTHO05D003442 6.8e-14 81.6 168 39.9
MSTRG.5917 Avicennia marina HOM05D001890 ORTHO05D003442 8.8e-14 81.3 188 36.2
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 8.8e-14 81.3 164 35.4
Nitab4.5_0005218g0020 Nicotiana tabacum HOM05D001890 ORTHO05D003442 8.8e-14 81.3 55 67.3
SalBow5G5266 Salvia bowleyana HOM05D001890 ORTHO05D003442 8.8e-14 81.3 165 37.6
Cpa.g.sc104.3 Carica papaya HOM05D001890 ORTHO05D003442 1.2e-13 80.9 192 33.3
Nitab4.5_0009788g0020 Nicotiana tabacum HOM05D001890 ORTHO05D003442 1.2e-13 80.9 55 65.5
A03p02730 Brassica napus HOM05D001890 ORTHO05D003442 2.0e-13 80.1 164 35.4
Rhsim02G0181100 Rhododendron simsii HOM05D001890 ORTHO05D003442 2.6e-13 79.7 55 67.3
Atru.chr8.1302 Acer truncatum HOM05D001890 ORTHO05D003442 3.4e-13 79.3 57 66.7
Sed0014759 Sechium edule HOM05D001890 ORTHO05D003442 3.4e-13 79.3 204 34.8
arahy.Tifrunner.gnm1.ann1.JU9MFG Arachis hypogaea HOM05D001890 ORTHO05D003442 4.4e-13 79.0 201 35.3
Peaxi162Scf00675g00056 Petunia axillaris HOM05D001890 ORTHO05D003442 4.4e-13 79.0 80 48.8
Medtr1g055315 Medicago truncatula HOM05D001890 ORTHO05D003442 5.7e-13 78.6 199 33.2
Sc07g0006350 Simmondsia chinensis HOM05D001890 ORTHO05D003442 5.7e-13 78.6 122 41.8
arahy.Tifrunner.gnm1.ann1.3V0CBS Arachis hypogaea HOM05D001890 ORTHO05D003442 1.3e-12 77.4 206 33.5
Carub.0003s1106 Capsella rubella HOM05D001890 ORTHO05D003442 1.3e-12 77.4 187 35.3
Sabra16G0068300 Salix brachista HOM05D001890 ORTHO05D003442 1.3e-12 77.4 144 36.1
vmacro09092 Vaccinium macrocarpon HOM05D001890 ORTHO05D003442 1.3e-12 77.4 215 31.2
VMungo0720G1360 Vigna mungo HOM05D001890 ORTHO05D003442 1.3e-12 77.4 182 36.8
AT3G11720 Arabidopsis thaliana HOM05D001890 ORTHO05D003442 1.7e-12 77.0 178 36.0
CARHR086270 Cardamine hirsuta HOM05D001890 ORTHO05D003442 1.7e-12 77.0 167 34.7
Glyma.03G203900 Glycine max HOM05D001890 ORTHO05D003442 1.7e-12 77.0 85 49.4
HanXRQChr13g0398661 Helianthus annuus HOM05D001890 ORTHO05D003442 1.7e-12 77.0 189 32.8
RcHm_v2.0_Chr3g0476671 Rosa chinensis HOM05D001890 ORTHO05D003442 2.2e-12 76.6 215 32.1
MELO3C009560.2 Cucumis melo HOM05D001890 ORTHO05D003442 2.8e-12 76.3 201 36.3
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 2.8e-12 76.3 111 44.1
BraA03t09636Z Brassica rapa HOM05D001890 ORTHO05D003442 4.8e-12 75.5 163 34.4
Zm00001eb200080 Zea mays HOM05D001890 ORTHO05D003442 4.8e-12 75.5 180 36.1
ATR0697G280 Amborella trichopoda HOM05D001890 ORTHO05D003442 6.3e-12 75.1 123 37.4
Hund10836 Selenicereus undatus HOM05D001890 ORTHO05D003442 6.3e-12 75.1 127 40.2
BcaB04g18657 Brassica carinata HOM05D001890 ORTHO05D003442 8.3e-12 74.7 165 35.2
Medtr7g106640 Medicago truncatula HOM05D001890 ORTHO05D003442 8.3e-12 74.7 161 35.4
CsaV3_3G038170 Cucumis sativus L. HOM05D001890 ORTHO05D003442 1.1e-11 74.3 199 34.2
Lj5g0000561 Lotus japonicus HOM05D001890 ORTHO05D003442 1.1e-11 74.3 195 36.4
PSO384G4065 Papaver somniferum HOM05D001890 ORTHO05D003442 1.1e-11 74.3 118 39.0
Psat3g028200 Pisum sativum HOM05D001890 ORTHO05D003442 1.1e-11 74.3 122 41.8
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 1.4e-11 73.9 216 32.9
PSO339G0680 Papaver somniferum HOM05D001890 ORTHO05D003442 1.4e-11 73.9 206 34.0
Potri.016G067000 Populus trichocarpa HOM05D001890 ORTHO05D003442 1.4e-11 73.9 146 38.4
Migut.J00744 Erythranthe guttata HOM05D001890 ORTHO05D003442 1.8e-11 73.6 169 33.1
TPR.G25807 Trifolium pratense HOM05D001890 ORTHO05D003442 1.8e-11 73.6 156 37.2
Aqoxy2G00642 Aquilegia oxysepala HOM05D001890 ORTHO05D003442 2.4e-11 73.2 58 58.6
AL3G23280 Arabidopsis lyrata HOM05D001890 ORTHO05D003442 2.4e-11 73.2 184 34.8
MBI11_g01309_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D003442 2.4e-11 73.2 121 38.0
Aa31sc52G250 Aethionema arabicum HOM05D001890 ORTHO05D003442 3.1e-11 72.8 164 32.9
arahy.Tifrunner.gnm1.ann1.M3JRXW Arachis hypogaea HOM05D001890 ORTHO05D003442 3.1e-11 72.8 168 35.1
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 3.1e-11 72.8 164 34.1
Migut.L01851 Erythranthe guttata HOM05D001890 ORTHO05D003442 3.1e-11 72.8 170 32.4
Ca_11670_v3 Cicer arietinum L. HOM05D001890 ORTHO05D003442 4.1e-11 72.4 198 33.8
Thhalv10020420m.g Eutrema salsugineum HOM05D001890 ORTHO05D003442 4.1e-11 72.4 185 35.7
FvH4_6g20770 Fragaria vesca HOM05D001890 ORTHO05D003442 4.1e-11 72.4 214 30.8
FAN05G0175 Fragaria x ananassa HOM05D001890 ORTHO05D003442 4.1e-11 72.4 218 29.4
FAN14G1848 Fragaria x ananassa HOM05D001890 ORTHO05D003442 4.1e-11 72.4 214 30.8
Glyma.19G201300 Glycine max HOM05D001890 ORTHO05D003442 4.1e-11 72.4 125 40.0
Potri.006G201000 Populus trichocarpa HOM05D001890 ORTHO05D003442 4.1e-11 72.4 55 58.2
THA.LOC104816629 Tarenaya hassleriana HOM05D001890 ORTHO05D003442 4.1e-11 72.4 232 31.0
FAN09G2041 Fragaria x ananassa HOM05D001890 ORTHO05D003442 5.4e-11 72.0 215 30.2
Glyma.02G193200 Glycine max HOM05D001890 ORTHO05D003442 5.4e-11 72.0 56 64.3
BcaB06g25587 Brassica carinata HOM05D001890 ORTHO05D003442 7.0e-11 71.6 170 32.9
Lj1g0026398 Lotus japonicus HOM05D001890 ORTHO05D003442 1.2e-10 70.9 55 61.8
Lalb_Chr01g0017781 Lupinus albus HOM05D001890 ORTHO05D003442 1.2e-10 70.9 193 34.7
FAN05G0573 Fragaria x ananassa HOM05D001890 ORTHO05D003442 2.7e-10 69.7 218 28.9
Phvul.001G197400 Phaseolus vulgaris HOM05D001890 ORTHO05D003442 2.7e-10 69.7 118 43.2
Sabra06G0154700 Salix brachista HOM05D001890 ORTHO05D003442 2.7e-10 69.7 143 37.1
Sp3g09950 Schrenkiella parvula HOM05D001890 ORTHO05D003442 2.7e-10 69.7 183 35.0
C03p45110 Brassica napus HOM05D001890 ORTHO05D003442 3.5e-10 69.3 165 37.0
Gohir.A01G135400 Gossypium hirsutum HOM05D001890 ORTHO05D003442 3.5e-10 69.3 147 38.8
arahy.Tifrunner.gnm1.ann1.AQHB6D Arachis hypogaea HOM05D001890 ORTHO05D003442 4.5e-10 68.9 176 35.2
BcaC01g04089 Brassica carinata HOM05D001890 ORTHO05D003442 4.5e-10 68.9 167 29.9
Ciclev10011250m.g Citrus clementina HOM05D001890 ORTHO05D003442 4.5e-10 68.9 240 28.3
A03p37250 Brassica napus HOM05D001890 ORTHO05D003442 7.7e-10 68.2 167 30.5
BolC3t16775H Brassica oleracea HOM05D001890 ORTHO05D003442 7.7e-10 68.2 165 36.4
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 1.3e-09 67.4 199 32.7
BcaC05g29335 Brassica carinata HOM05D001890 ORTHO05D003442 1.7e-09 67.0 166 34.3
PSO384G0895 Papaver somniferum HOM05D001890 ORTHO05D003442 1.7e-09 67.0 109 39.4
SGA_v2.0_scaffold392G50676 Striga asiatica HOM05D001890 ORTHO05D003442 2.9e-09 66.2 176 30.7
BolC5t34281H Brassica oleracea HOM05D001890 ORTHO05D003442 5.0e-09 65.5 166 34.3
BraA03t12885Z Brassica rapa HOM05D001890 ORTHO05D003442 6.5e-09 65.1 167 30.5
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 8.6e-09 64.7 189 30.7
arahy.Tifrunner.gnm1.ann1.FZJA3R Arachis hypogaea HOM05D001890 ORTHO05D003442 1.9e-08 63.5 124 37.9
A05p37600 Brassica napus HOM05D001890 ORTHO05D003442 1.9e-08 63.5 166 33.7
Glyma.10G083700 Glycine max HOM05D001890 ORTHO05D003442 1.9e-08 63.5 136 34.6
CDE04G0663 Ceratophyllum demersum HOM05D001890 ORTHO05D003442 2.5e-08 63.2 47 61.7
C05p56160 Brassica napus HOM05D001890 ORTHO05D003442 4.2e-08 62.4 165 32.1
BraA05t22558Z Brassica rapa HOM05D001890 ORTHO05D003442 1.6e-07 60.5 165 32.1


User provided reference genes

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