Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 1.6e-126 456.1 224 100.0
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 6.7e-125 450.7 224 97.8
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 9.5e-79 297.4 220 68.6
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 1.1e-74 283.9 229 63.8
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 1.9e-74 283.1 224 63.8
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 3.2e-74 282.3 222 65.8
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 5.4e-74 281.6 223 64.1
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.2e-73 280.4 213 66.7
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 1.6e-73 280.0 222 63.1
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.0e-73 279.6 224 63.8
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 2.0e-73 279.6 221 62.9
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 2.7e-73 279.3 224 63.8
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 2.7e-73 279.3 168 73.8
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 3.5e-73 278.9 173 74.0
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 3.5e-73 278.9 219 64.8
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 4.6e-73 278.5 227 61.7
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 6.0e-73 278.1 226 62.4
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 7.8e-73 277.7 168 73.2
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 7.8e-73 277.7 217 64.5
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.7e-72 276.6 224 63.4
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 2.3e-72 276.2 223 63.2
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 3.0e-72 275.8 219 61.2
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 3.0e-72 275.8 218 62.4
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 8.6e-72 274.2 228 62.7
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 1.1e-71 273.9 219 60.7
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 4.3e-71 271.9 218 62.4
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 5.6e-71 271.6 225 61.8
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 9.5e-71 270.8 220 63.6
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.2e-70 270.4 227 62.1
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.2e-70 270.4 227 62.1
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 1.2e-70 270.4 250 58.0
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 1.6e-70 270.0 208 62.0
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 2.1e-70 269.6 225 61.8
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 4.7e-70 268.5 216 62.5
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 8.1e-70 267.7 210 63.3
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 4.0e-69 265.4 220 60.0
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 5.2e-69 265.0 223 60.1
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 6.8e-69 264.6 225 60.0
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 1.2e-68 263.8 223 62.3
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.5e-68 263.5 220 59.5
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 7.5e-68 261.2 211 60.2
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 7.5e-68 261.2 209 59.3
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 7.5e-68 261.2 223 61.0
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 9.8e-68 260.8 222 59.5
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 9.8e-68 260.8 222 59.5
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 1.3e-67 260.4 211 62.1
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.2e-67 259.6 223 60.1
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 2.2e-67 259.6 221 59.3
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 6.4e-67 258.1 202 65.3
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 1.1e-66 257.3 190 65.3
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 1.1e-66 257.3 221 59.7
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 1.9e-66 256.5 175 66.3
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 1.9e-66 256.5 222 57.2
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 2.4e-66 256.1 174 65.5
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 5.4e-66 255.0 210 59.5
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 7.1e-66 254.6 173 69.4
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 1.2e-65 253.8 219 58.9
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 1.2e-65 253.8 168 67.9
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 2.7e-65 252.7 218 58.7
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 2.7e-65 252.7 166 68.1
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 3.5e-65 252.3 227 58.1
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 1.0e-64 250.8 161 72.7
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 1.7e-64 250.0 176 66.5
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 1.7e-64 250.0 222 57.2
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 2.3e-64 249.6 206 59.2
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 6.6e-64 248.1 222 58.6
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 8.6e-64 247.7 208 60.6
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 1.5e-63 246.9 230 52.6
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 1.5e-63 246.9 222 59.0
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 1.9e-63 246.5 219 53.9
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 1.9e-63 246.5 219 53.9
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 1.9e-63 246.5 219 53.9
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 2.5e-63 246.1 219 53.4
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 2.5e-63 246.1 219 53.9
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 2.5e-63 246.1 219 54.8
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 2.5e-63 246.1 223 56.5
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 3.3e-63 245.7 219 53.9
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 1.2e-62 243.8 219 52.1
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 7.6e-60 234.6 214 52.8
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 2.2e-59 233.0 214 54.7
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 4.9e-59 231.9 214 52.8
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 1.1e-58 230.7 214 52.8
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 9.6e-55 217.6 135 72.6
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 5.2e-53 211.8 165 59.4
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.3e-51 207.2 102 89.2
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 2.9e-51 206.1 226 51.8
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 4.9e-51 205.3 126 73.8
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 6.4e-51 204.9 323 40.6
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 3.2e-50 202.6 102 87.3
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 2.4e-45 186.4 174 52.9
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 1.4e-42 177.2 105 75.2
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 5.4e-42 175.3 118 67.8
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 1.3e-38 164.1 144 54.2
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 1.6e-38 163.7 217 48.4
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 1.7e-27 127.1 75 74.7
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 1.9e-26 123.6 142 49.3
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 4.6e-25 119.0 135 49.6
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 6.7e-24 115.2 135 43.0
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 4.1e-21 105.9 119 44.5
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 4.1e-21 105.9 161 41.0
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 5.5e-18 95.5 131 41.2
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 2.7e-17 93.2 137 43.1
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.8e-13 80.5 40 85.0
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 2.0e-12 77.0 122 38.5


User provided reference genes

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