Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2395 Papaver somniferum HOM05D003565 ORTHO05D003943 1.4e-76 289.7 155 100.0
PSO210G5566 Papaver somniferum HOM05D003565 ORTHO05D003943 2.2e-74 282.3 155 98.1
CiPaw.02G081300 Carya illinoinensis HOM05D003565 ORTHO05D003943 3.0e-39 165.6 148 63.5
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 3.0e-39 165.6 149 63.8
Thecc.04G287000 Theobroma cacao HOM05D003565 ORTHO05D003943 2.8e-37 159.1 153 58.8
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 1.1e-36 157.1 151 61.6
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 1.8e-36 156.4 160 56.9
Gorai.011G191400 Gossypium raimondii HOM05D003565 ORTHO05D003943 1.5e-35 153.3 151 58.9
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 2.0e-35 152.9 149 59.1
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 2.0e-35 152.9 149 57.7
GSVIVG01035140001 Vitis vinifera HOM05D003565 ORTHO05D003943 2.0e-35 152.9 150 60.7
Gohir.A10G165200 Gossypium hirsutum HOM05D003565 ORTHO05D003943 3.4e-35 152.1 151 58.3
Duzib151G1023 Durio zibethinus HOM05D003565 ORTHO05D003943 2.9e-34 149.1 153 57.5
Gohir.D10G171300 Gossypium hirsutum HOM05D003565 ORTHO05D003943 2.9e-34 149.1 151 58.3
Sabra10G0007900 Salix brachista HOM05D003565 ORTHO05D003943 4.9e-34 148.3 149 56.4
SalBow2G2654 Salvia bowleyana HOM05D003565 ORTHO05D003943 1.1e-33 147.1 152 57.2
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 1.1e-33 147.1 149 59.1
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 3.2e-33 145.6 159 57.2
CSS0008161 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 4.2e-33 145.2 149 55.0
MSTRG.10106 Avicennia marina HOM05D003565 ORTHO05D003943 9.3e-33 144.1 147 57.8
Migut.O00777 Erythranthe guttata HOM05D003565 ORTHO05D003943 2.7e-32 142.5 144 56.9
MD00G1127800 Malus domestica HOM05D003565 ORTHO05D003943 3.5e-32 142.1 154 55.2
Actinidia28386 Actinidia chinensis HOM05D003565 ORTHO05D003943 4.6e-32 141.7 140 57.1
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 4.6e-32 141.7 146 57.5
SGA_v2.0_scaffold18G08345 Striga asiatica HOM05D003565 ORTHO05D003943 6.0e-32 141.4 152 53.9
Prupe.1G133700 Prunus persica HOM05D003565 ORTHO05D003943 1.0e-31 140.6 152 57.2
Prupe.1G133600 Prunus persica HOM05D003565 ORTHO05D003943 3.0e-31 139.0 151 55.6
TAR362G0267 Trochodendron aralioides HOM05D003565 ORTHO05D003943 1.1e-30 137.1 150 55.3
Cpa.g.sc16.191 Carica papaya HOM05D003565 ORTHO05D003943 1.5e-30 136.7 154 51.3
Cfa015405 Carpinus fangiana HOM05D003565 ORTHO05D003943 2.5e-30 136.0 150 58.0
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.5e-30 136.0 154 54.5
SalBow2G0621 Salvia bowleyana HOM05D003565 ORTHO05D003943 2.5e-30 136.0 145 53.8
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 5.6e-30 134.8 149 51.7
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 5.6e-30 134.8 152 51.3
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 9.6e-30 134.0 150 54.7
Sed0004032 Sechium edule HOM05D003565 ORTHO05D003943 1.6e-29 133.3 153 52.3
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 3.7e-29 132.1 155 55.5
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 4.8e-29 131.7 155 55.5
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 8.1e-29 131.0 155 55.5
Haze_01182 Corylus avellana HOM05D003565 ORTHO05D003943 1.8e-28 129.8 142 56.3
Peaxi162Scf00246g01219 Petunia axillaris HOM05D003565 ORTHO05D003943 1.8e-28 129.8 156 53.2
Oeu064291.1 Olea europaea HOM05D003565 ORTHO05D003943 6.9e-28 127.9 159 47.8
CANSAT78G1552 Cannabis sativa HOM05D003565 ORTHO05D003943 1.2e-27 127.1 153 51.0
ClCG05G006170 Citrullus lanatus HOM05D003565 ORTHO05D003943 1.2e-27 127.1 152 46.7
CsaV3_3G014750 Cucumis sativus L. HOM05D003565 ORTHO05D003943 1.5e-27 126.7 153 51.6
Solyc01g066680.3 Solanum lycopersicum HOM05D003565 ORTHO05D003943 1.5e-27 126.7 157 51.6
BcaC09g48620 Brassica carinata HOM05D003565 ORTHO05D003943 2.0e-27 126.3 157 51.6
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 2.0e-27 126.3 148 50.7
PGR004G2879 Punica granatum HOM05D003565 ORTHO05D003943 7.6e-27 124.4 149 52.3
CiPaw.02G081400 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.2e-26 122.9 148 52.0
CiPaw.02G081500 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.2e-26 122.9 148 52.0
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 2.9e-26 122.5 149 54.4
Cc03_g01690 Coffea canephora HOM05D003565 ORTHO05D003943 8.4e-26 120.9 152 52.6
TWI09G1223 Tripterygium wilfordii HOM05D003565 ORTHO05D003943 8.4e-26 120.9 147 50.3
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 1.4e-25 120.2 152 52.6
Aa31LG8G3780 Aethionema arabicum HOM05D003565 ORTHO05D003943 5.5e-25 118.2 114 53.5
AL3G29580 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 5.5e-25 118.2 172 43.6
CSS0017850 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 5.5e-25 118.2 149 47.7
Carub.0003s1639 Capsella rubella HOM05D003565 ORTHO05D003943 1.2e-24 117.1 183 42.6
Glyma.09G043500 Glycine max HOM05D003565 ORTHO05D003943 1.2e-24 117.1 149 48.3
MELO3C006673.2 Cucumis melo HOM05D003565 ORTHO05D003943 1.6e-24 116.7 155 49.0
AT3G16660 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 6.0e-24 114.8 162 45.1
PGR004G0277 Punica granatum HOM05D003565 ORTHO05D003943 1.0e-23 114.0 149 47.7
Actinidia14291 Actinidia chinensis HOM05D003565 ORTHO05D003943 1.3e-23 113.6 147 50.3
CARHR091910 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.3e-23 113.6 159 46.5
Cfa015408 Carpinus fangiana HOM05D003565 ORTHO05D003943 1.3e-23 113.6 150 51.3
PGR004G2171 Punica granatum HOM05D003565 ORTHO05D003943 2.3e-23 112.8 147 48.3
Ciclev10006885m.g Citrus clementina HOM05D003565 ORTHO05D003943 3.0e-23 112.5 150 46.7
DCAR_027062 Daucus carota HOM05D003565 ORTHO05D003943 3.9e-23 112.1 147 46.3
DCAR_027064 Daucus carota HOM05D003565 ORTHO05D003943 3.9e-23 112.1 147 46.3
Nitab4.5_0000513g0180 Nicotiana tabacum HOM05D003565 ORTHO05D003943 3.9e-23 112.1 158 48.7
CiPaw.02G059200 Carya illinoinensis HOM05D003565 ORTHO05D003943 5.1e-23 111.7 148 50.0
Cfa021269 Carpinus fangiana HOM05D003565 ORTHO05D003943 1.1e-22 110.5 154 48.7
Lalb_Chr15g0083411 Lupinus albus HOM05D003565 ORTHO05D003943 1.1e-22 110.5 149 47.7
CARHR150150 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.5e-22 110.2 145 44.1
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 1.5e-22 110.2 146 47.3
Psat1g155160 Pisum sativum HOM05D003565 ORTHO05D003943 1.5e-22 110.2 148 47.3
Ciclev10006409m.g Citrus clementina HOM05D003565 ORTHO05D003943 1.9e-22 109.8 149 47.7
Nitab4.5_0005362g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 3.3e-22 109.0 148 47.3
CiPaw.02G058900 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.6e-21 106.7 148 48.0
MELO3C035189.2 Cucumis melo HOM05D003565 ORTHO05D003943 3.7e-21 105.5 145 45.5
Medtr2g436350 Medicago truncatula HOM05D003565 ORTHO05D003943 6.2e-21 104.8 149 45.0
FAN12G0988 Fragaria x ananassa HOM05D003565 ORTHO05D003943 3.1e-20 102.4 150 48.7
QL06p009817 Quercus lobata HOM05D003565 ORTHO05D003943 6.9e-20 101.3 151 43.0
AT3G16670 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 9.0e-20 100.9 148 44.6
CARHR091920 Cardamine hirsuta HOM05D003565 ORTHO05D003943 9.0e-20 100.9 145 43.4
FvH4_4g18430 Fragaria vesca HOM05D003565 ORTHO05D003943 3.4e-19 99.0 139 48.9
Phvul.009G249400 Phaseolus vulgaris HOM05D003565 ORTHO05D003943 4.5e-19 98.6 144 43.8
Lj6g0014140 Lotus japonicus HOM05D003565 ORTHO05D003943 5.8e-19 98.2 150 44.7
Nitab4.5_0000194g0060 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.8e-19 98.2 148 44.6
ATR0796G036 Amborella trichopoda HOM05D003565 ORTHO05D003943 7.6e-19 97.8 112 54.5
Eucgr.H03941 Eucalyptus grandis HOM05D003565 ORTHO05D003943 2.2e-18 96.3 152 42.8
FAN12G2280 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.9e-18 95.9 150 47.3
Carub.0003s1640 Capsella rubella HOM05D003565 ORTHO05D003943 5.0e-18 95.1 148 41.9
AL3G29590 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 6.5e-18 94.7 145 44.8
Carub.0002s1293 Capsella rubella HOM05D003565 ORTHO05D003943 6.5e-18 94.7 148 40.5
CARHR091930 Cardamine hirsuta HOM05D003565 ORTHO05D003943 6.5e-18 94.7 147 42.9
VMungo1309G1767 Vigna mungo HOM05D003565 ORTHO05D003943 6.5e-18 94.7 136 41.9
CARHR150160 Cardamine hirsuta HOM05D003565 ORTHO05D003943 8.4e-18 94.4 147 42.9
PGR004G2038 Punica granatum HOM05D003565 ORTHO05D003943 1.1e-17 94.0 152 44.1
CsaV3_UNG044240 Cucumis sativus L. HOM05D003565 ORTHO05D003943 4.2e-17 92.0 127 44.9
Oeu027151.1 Olea europaea HOM05D003565 ORTHO05D003943 4.2e-17 92.0 149 43.6
Oeu027152.1 Olea europaea HOM05D003565 ORTHO05D003943 4.2e-17 92.0 148 43.9
Sed0026730 Sechium edule HOM05D003565 ORTHO05D003943 4.2e-17 92.0 127 43.3
CiPaw.02G059300 Carya illinoinensis HOM05D003565 ORTHO05D003943 5.5e-17 91.7 118 50.8
CsaV3_6G023960 Cucumis sativus L. HOM05D000549 ORTHO05D001527 9.3e-17 90.9 127 44.1
A01p37210 Brassica napus HOM05D003565 ORTHO05D003943 2.1e-16 89.7 166 39.8
BcaB04g20866 Brassica carinata HOM05D003565 ORTHO05D003943 3.5e-16 89.0 170 39.4
A01p37230 Brassica napus HOM05D003565 ORTHO05D003943 6.1e-16 88.2 166 39.2
CsaV3_6G024110 Cucumis sativus L. HOM05D000549 ORTHO05D003943 6.1e-16 88.2 127 43.3
Thhalv10021613m.g Eutrema salsugineum HOM05D003565 ORTHO05D003943 1.0e-15 87.4 116 44.8
HanXRQChr03g0089351 Helianthus annuus HOM05D003565 ORTHO05D003943 1.3e-15 87.0 154 41.6
Nitab4.5_0003949g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.3e-15 87.0 155 45.2
TPR.G31280 Trifolium pratense HOM05D003565 ORTHO05D003943 1.3e-15 87.0 121 43.8
FAN17G0998 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.8e-15 86.7 156 39.1
RcHm_v2.0_Chr4g0422901 Rosa chinensis HOM05D003565 ORTHO05D003943 1.8e-15 86.7 146 45.9
Nitab4.5_0003949g0040 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.3e-15 86.3 155 43.9
CiPaw.02G081600 Carya illinoinensis HOM05D003565 ORTHO05D003943 3.9e-15 85.5 121 46.3
Thhalv10021522m.g Eutrema salsugineum HOM05D003565 ORTHO05D003943 3.9e-15 85.5 158 37.3
HanXRQChr03g0088811 Helianthus annuus HOM05D003565 ORTHO05D003943 5.1e-15 85.1 133 45.9
Nitab4.5_0000493g0100 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.1e-15 85.1 147 42.9
HPP92_006917 Vanilla planifolia HOM05D003565 ORTHO05D003943 1.5e-14 83.6 144 41.7
Sp3g14950 Schrenkiella parvula HOM05D003565 ORTHO05D003943 1.9e-14 83.2 187 36.9
HanXRQChr08g0214541 Helianthus annuus HOM05D003565 ORTHO05D003943 2.5e-14 82.8 143 43.4
C01p47670 Brassica napus HOM05D003565 ORTHO05D003943 7.4e-14 81.3 171 36.8
CiPaw.02G059100 Carya illinoinensis HOM05D003565 ORTHO05D003943 7.4e-14 81.3 104 51.9
HanXRQChr03g0088801 Helianthus annuus HOM05D003565 ORTHO05D003943 1.6e-13 80.1 151 40.4
HanXRQChr05g0130321 Helianthus annuus HOM05D003565 ORTHO05D003943 1.6e-13 80.1 142 39.4
Migut.N02472 Erythranthe guttata HOM05D003565 ORTHO05D003943 6.3e-13 78.2 153 38.6
BraA01t03783Z Brassica rapa HOM05D003565 ORTHO05D003943 8.2e-13 77.8 171 37.4
HanXRQChr01g0002181 Helianthus annuus HOM05D003565 ORTHO05D003943 8.2e-13 77.8 142 38.7
BcaB04g18928 Brassica carinata HOM05D003565 ORTHO05D003943 1.1e-12 77.4 146 37.0
BraA01t03781Z Brassica rapa HOM05D003565 ORTHO05D003943 1.1e-12 77.4 171 37.4
BraA01t03825Z Brassica rapa HOM05D003565 ORTHO05D003943 1.4e-12 77.0 180 34.4
BraA03t13156Z Brassica rapa HOM05D003565 ORTHO05D003943 1.4e-12 77.0 155 37.4
Nitab4.5_0000194g0050 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.4e-12 77.0 130 43.8
BolC1t04739H Brassica oleracea HOM05D003565 ORTHO05D003943 1.8e-12 76.6 193 33.7
DCAR_027061 Daucus carota HOM05D003565 ORTHO05D003943 1.8e-12 76.6 118 45.8
A03p40060 Brassica napus HOM05D003565 ORTHO05D003943 2.4e-12 76.3 147 38.1
QL06p009754 Quercus lobata HOM05D003565 ORTHO05D003943 2.4e-12 76.3 151 42.4
A01p37640 Brassica napus HOM05D003565 ORTHO05D003943 5.3e-12 75.1 195 32.8
BcaC09g48665 Brassica carinata HOM05D003565 ORTHO05D003943 1.5e-11 73.6 171 36.8
C01p47150 Brassica napus HOM05D003565 ORTHO05D003943 1.5e-11 73.6 171 36.8
BolC1t04684H Brassica oleracea HOM05D003565 ORTHO05D003943 2.0e-11 73.2 172 36.6
DCAR_002472 Daucus carota HOM05D003565 ORTHO05D003943 2.0e-11 73.2 144 41.0
QL06p009790 Quercus lobata HOM05D003565 ORTHO05D003943 2.0e-11 73.2 151 41.7
QL93p0060_0027 Quercus lobata HOM05D003565 ORTHO05D003943 2.0e-11 73.2 154 41.6
QL06p009701 Quercus lobata HOM05D003565 ORTHO05D003943 5.9e-11 71.6 151 41.7
QL93p0060_0003 Quercus lobata HOM05D003565 ORTHO05D003943 5.9e-11 71.6 154 40.9
QL93p0060_0019 Quercus lobata HOM05D003565 ORTHO05D003943 5.9e-11 71.6 151 41.7
QL06p009717 Quercus lobata HOM05D003565 ORTHO05D003943 7.7e-11 71.2 154 40.3
QL06p009778 Quercus lobata HOM05D003565 ORTHO05D003943 7.7e-11 71.2 154 40.9
SGA_v2.0_scaffold177G39437 Striga asiatica HOM05D003565 ORTHO05D003943 1.3e-10 70.5 147 34.0
HanXRQChr08g0214531 Helianthus annuus HOM05D003565 ORTHO05D003943 1.7e-10 70.1 150 36.7
QL06p009725 Quercus lobata HOM05D003565 ORTHO05D003943 2.9e-10 69.3 103 45.6
QL93p0060_0047 Quercus lobata HOM05D003565 ORTHO05D003943 2.9e-10 69.3 151 41.1
QL06p009664 Quercus lobata HOM05D003565 ORTHO05D003943 5.0e-10 68.6 121 45.5
QL06p009739 Quercus lobata HOM05D003565 ORTHO05D003943 8.5e-10 67.8 154 40.3
CsaV3_3G014770 Cucumis sativus L. HOM05D003565 ORTHO05D003943 1.1e-09 67.4 156 35.9
QL06p009796 Quercus lobata HOM05D003565 ORTHO05D003943 1.1e-09 67.4 108 45.4
C03p48610 Brassica napus HOM05D003565 ORTHO05D003943 1.4e-09 67.0 147 36.1
HanXRQChr03g0089401 Helianthus annuus HOM05D003565 ORTHO05D003943 1.4e-09 67.0 155 35.5
HanXRQChr03g0089391 Helianthus annuus HOM05D003565 ORTHO05D003943 2.5e-09 66.2 122 39.3
DCAR_030515 Daucus carota HOM05D003565 ORTHO05D003943 4.2e-09 65.5 125 38.4
DCAR_022430 Daucus carota HOM05D003565 ORTHO05D003943 1.2e-08 63.9 160 38.1
ECA247G1649 Erigeron canadensis HOM05D023078 ORTHO05D003943 2.1e-08 63.2 148 35.8
Oeu026321.1 Olea europaea HOM05D003565 ORTHO05D003943 2.1e-08 63.2 145 35.2
Zm00001eb111390 Zea mays HOM05D003565 ORTHO05D003943 2.1e-08 63.2 131 39.7
Nitab4.5_0000930g0010 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.7e-08 62.8 149 37.6
arahy.Tifrunner.gnm1.ann1.Q570SP Arachis hypogaea HOM05D003565 ORTHO05D003943 3.6e-08 62.4 153 35.3
BcaC01g03788 Brassica carinata HOM05D003565 ORTHO05D003943 3.6e-08 62.4 147 35.4
A02p14820 Brassica napus HOM05D008071 ORTHO05D009954 4.6e-08 62.0 115 34.8
C02p24260 Brassica napus HOM05D008071 ORTHO05D009954 4.6e-08 62.0 115 34.8
BraA02t06549Z Brassica rapa HOM05D008071 ORTHO05D009954 4.6e-08 62.0 115 34.8
arahy.Tifrunner.gnm1.ann1.VE1P60 Arachis hypogaea HOM05D003565 ORTHO05D003943 6.1e-08 61.6 94 43.6
BcaC03g14931 Brassica carinata HOM05D008071 ORTHO05D009954 6.1e-08 61.6 115 34.8
BolC2t08535H Brassica oleracea HOM05D008071 ORTHO05D009954 6.1e-08 61.6 115 34.8
Nitab4.5_0000493g0090 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.8e-07 60.1 97 43.3
QL06p009884 Quercus lobata HOM05D003565 ORTHO05D003943 2.3e-07 59.7 143 35.7
Nitab4.5_0000493g0080 Nicotiana tabacum HOM05D003565 ORTHO05D003943 3.0e-07 59.3 148 35.8
Os07g0674400 Oryza sativa ssp. japonica HOM05D003565 ORTHO05D003943 5.1e-07 58.5 144 36.8
BcaB04g18929 Brassica carinata HOM05D021100 ORTHO05D021772 2.0e-06 56.6 126 38.1
BcaB05g24356 Brassica carinata HOM05D008071 ORTHO05D009954 2.0e-06 56.6 139 33.1
CsaV3_3G014760 Cucumis sativus L. HOM05D003565 ORTHO05D003943 2.0e-06 56.6 107 37.4
Zm00001eb016410 Zea mays HOM05D003565 ORTHO05D003943 3.3e-06 55.8 133 38.3
Hma1.2p1_0078F.1_g040470 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 9.7e-06 54.3 158 36.1


User provided reference genes

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