Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 3.1e-105 385.2 202 100.0
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 1.6e-101 372.9 202 97.0
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 8.9e-68 260.8 200 74.5
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 1.5e-67 260.0 200 73.0
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 7.5e-67 257.7 206 70.9
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 4.3e-62 241.9 202 67.3
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 1.2e-61 240.4 209 66.5
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 2.1e-61 239.6 210 67.6
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 2.8e-61 239.2 202 67.3
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 6.2e-61 238.0 175 72.6
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 6.2e-61 238.0 201 67.7
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 3.1e-60 235.7 202 65.3
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 3.1e-60 235.7 215 64.2
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 5.2e-60 235.0 200 66.5
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 2.0e-59 233.0 207 65.7
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 2.6e-59 232.6 178 72.5
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 3.4e-59 232.3 166 72.9
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 3.4e-59 232.3 207 65.2
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 5.8e-59 231.5 208 65.4
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 7.5e-59 231.1 172 73.3
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 9.8e-59 230.7 203 65.5
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 1.7e-58 229.9 203 65.5
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 2.2e-58 229.6 170 71.8
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 2.9e-58 229.2 207 65.2
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 2.9e-58 229.2 203 65.5
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 3.7e-58 228.8 169 72.2
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 4.9e-58 228.4 202 65.3
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 6.4e-58 228.0 200 64.0
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 6.4e-58 228.0 201 67.7
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 8.3e-58 227.6 205 63.4
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 8.3e-58 227.6 202 64.4
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 1.1e-57 227.3 202 63.4
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 1.1e-57 227.3 205 64.4
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 1.4e-57 226.9 162 75.9
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 2.4e-57 226.1 206 64.6
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 2.4e-57 226.1 202 65.3
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 2.4e-57 226.1 207 64.3
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 4.1e-57 225.3 202 63.9
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 4.1e-57 225.3 198 64.6
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 9.2e-57 224.2 202 66.8
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 9.2e-57 224.2 202 66.8
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 9.2e-57 224.2 197 65.0
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 9.2e-57 224.2 163 75.5
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 1.2e-56 223.8 188 67.6
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.2e-56 223.8 157 75.2
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 1.6e-56 223.4 201 61.7
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 2.1e-56 223.0 206 64.6
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 2.7e-56 222.6 211 62.6
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 2.7e-56 222.6 200 63.0
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 3.5e-56 222.2 205 63.9
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 3.5e-56 222.2 209 65.1
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 4.6e-56 221.9 208 61.5
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 6.0e-56 221.5 207 64.3
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 6.0e-56 221.5 201 65.2
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 6.0e-56 221.5 203 65.0
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 6.0e-56 221.5 176 69.3
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 7.8e-56 221.1 209 62.2
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 7.8e-56 221.1 201 63.2
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 1.0e-55 220.7 201 64.7
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 1.3e-55 220.3 182 68.7
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 1.7e-55 219.9 196 65.3
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 1.7e-55 219.9 202 63.4
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 2.3e-55 219.5 196 64.3
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 2.3e-55 219.5 204 62.7
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 3.0e-55 219.2 165 70.9
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 3.0e-55 219.2 159 71.7
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 3.0e-55 219.2 159 71.7
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 3.9e-55 218.8 201 64.2
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 6.6e-55 218.0 205 62.9
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 1.1e-54 217.2 206 63.6
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 3.3e-54 215.7 204 63.7
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 5.6e-54 214.9 189 65.6
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 5.6e-54 214.9 209 66.0
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 7.3e-54 214.5 161 72.0
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 9.5e-54 214.2 130 81.5
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 1.2e-53 213.8 206 62.6
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 2.1e-53 213.0 206 61.7
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 2.8e-53 212.6 201 64.7
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 2.8e-53 212.6 171 67.3
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 6.2e-53 211.5 171 69.6
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 6.2e-53 211.5 198 61.6
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 8.1e-53 211.1 169 67.5
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 1.8e-52 209.9 200 62.0
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 3.1e-52 209.1 174 65.5
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 5.2e-52 208.4 195 61.5
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 6.8e-52 208.0 212 58.0
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 6.8e-52 208.0 197 61.9
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 6.8e-52 208.0 202 60.9
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 8.9e-52 207.6 196 61.7
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 4.4e-51 205.3 202 58.9
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 5.8e-51 204.9 199 59.8
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 1.7e-50 203.4 118 82.2
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 3.2e-49 199.1 134 73.1
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 5.1e-47 191.8 123 78.9
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 1.6e-45 186.8 131 67.2
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 1.6e-45 186.8 133 69.2
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.1e-44 184.1 191 53.9
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 2.4e-44 183.0 124 71.8
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 4.0e-44 182.2 188 53.7
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 2.0e-43 179.9 122 69.7
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 9.9e-43 177.6 171 56.7
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 1.7e-42 176.8 115 72.2
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 6.4e-42 174.9 192 57.8
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 1.1e-41 174.1 113 74.3
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 1.2e-40 170.6 200 56.5
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 9.9e-35 151.0 109 61.5
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 9.3e-33 144.4 161 54.0
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 5.1e-31 138.7 201 46.8
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.5e-22 110.5 170 34.1
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 2.4e-20 103.2 134 38.8
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 3.9e-15 85.9 104 42.3
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 8.2e-13 78.2 163 27.0
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 1.8e-12 77.0 48 75.0


User provided reference genes

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