Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2303 Papaver somniferum HOM05D005736 ORTHO05D007215 9.3e-178 626.7 305 100.0
PSO210G0197 Papaver somniferum HOM05D005736 ORTHO05D007215 3.5e-177 624.8 305 99.7
Aqoxy5G00736 Aquilegia oxysepala HOM05D005736 ORTHO05D007215 3.2e-146 521.9 298 79.9
GSVIVG01031141001 Vitis vinifera HOM05D005736 ORTHO05D007215 9.7e-143 510.4 294 79.6
PGR031G0613 Punica granatum HOM05D005736 ORTHO05D007215 2.2e-142 509.2 304 78.3
Glyma.03G235500 Glycine max HOM05D005736 ORTHO05D007215 8.2e-142 507.3 303 77.2
Phvul.006G089500 Phaseolus vulgaris HOM05D005736 ORTHO05D007215 7.0e-141 504.2 303 76.2
TAR633G1366 Trochodendron aralioides HOM05D005736 ORTHO05D007215 3.5e-140 501.9 306 77.5
Glyma.19G233300 Glycine max HOM05D005736 ORTHO05D007215 4.5e-140 501.5 301 77.1
Hma1.2p1_1292F.1_g273760 Hydrangea macrophylla HOM05D005736 ORTHO05D007215 4.5e-140 501.5 302 75.2
Thecc.05G313100 Theobroma cacao HOM05D005736 ORTHO05D007215 4.5e-140 501.5 299 76.6
Duzib106G0969 Durio zibethinus HOM05D005736 ORTHO05D007215 1.7e-139 499.6 299 75.6
CiPaw.07G021500 Carya illinoinensis HOM05D005736 ORTHO05D007215 5.0e-139 498.0 303 75.9
Potri.013G017000 Populus trichocarpa HOM05D005736 ORTHO05D007215 6.5e-139 497.7 299 76.3
Lj1g0012360 Lotus japonicus HOM05D005736 ORTHO05D007215 1.1e-138 496.9 301 76.1
Lalb_Chr15g0077351 Lupinus albus HOM05D005736 ORTHO05D007215 1.1e-138 496.9 295 77.3
Haze_04138 Corylus avellana HOM05D005736 ORTHO05D007215 1.5e-138 496.5 303 75.2
arahy.Tifrunner.gnm1.ann1.7HV2PX Arachis hypogaea HOM05D005736 ORTHO05D007215 2.5e-138 495.7 305 74.4
Sc09g0002940 Simmondsia chinensis HOM05D005736 ORTHO05D007215 2.5e-138 495.7 302 76.2
Sabra13G0020000 Salix brachista HOM05D005736 ORTHO05D007215 4.2e-138 495.0 299 75.9
COL.COLO4_10521 Corchorus olitorius HOM05D005736 ORTHO05D007215 5.5e-138 494.6 299 75.9
CSS0016231 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 7.2e-138 494.2 301 75.4
TAR362G0909 Trochodendron aralioides HOM05D005736 ORTHO05D007215 7.2e-138 494.2 303 76.6
Lsat_1_v5_gn_7_69261 Lactuca sativa HOM05D005736 ORTHO05D007215 1.2e-137 493.4 306 74.5
Medtr7g112700 Medicago truncatula HOM05D005736 ORTHO05D007215 1.2e-137 493.4 303 74.9
TWI36G0679 Tripterygium wilfordii HOM05D005736 ORTHO05D007215 1.2e-137 493.4 295 76.9
Sabra13G0015800 Salix brachista HOM05D005736 ORTHO05D007215 1.6e-137 493.0 299 75.6
CSS0007199 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 4.7e-137 491.5 301 75.1
arahy.Tifrunner.gnm1.ann1.B5Q7D5 Arachis hypogaea HOM05D005736 ORTHO05D007215 6.1e-137 491.1 306 74.2
MD12G1212900 Malus domestica HOM05D005736 ORTHO05D007215 6.1e-137 491.1 303 75.9
CANSAT54G0716 Cannabis sativa HOM05D005736 ORTHO05D007215 2.3e-136 489.2 303 73.9
Potri.005G025300 Populus trichocarpa HOM05D005736 ORTHO05D007215 2.3e-136 489.2 299 74.9
Atru.chr2.31 Acer truncatum HOM05D005736 ORTHO05D007215 3.0e-136 488.8 296 77.4
QL03p020205 Quercus lobata HOM05D005736 ORTHO05D007215 3.0e-136 488.8 303 74.6
TPR.G33191 Trifolium pratense HOM05D005736 ORTHO05D007215 3.0e-136 488.8 303 74.6
VMungo0540G0827 Vigna mungo HOM05D005736 ORTHO05D007215 2.0e-135 486.1 303 73.3
DCAR_003356 Daucus carota HOM05D005736 ORTHO05D007215 2.6e-135 485.7 303 73.3
Prupe.6G320500 Prunus persica HOM05D005736 ORTHO05D007215 2.6e-135 485.7 303 76.6
Gohir.D11G277900 Gossypium hirsutum HOM05D005736 ORTHO05D007215 7.5e-135 484.2 299 73.6
Nn3g21454 Nelumbo nucifera HOM05D005736 ORTHO05D007215 9.7e-135 483.8 306 74.5
Gorai.007G300100 Gossypium raimondii HOM05D005736 ORTHO05D007215 1.3e-134 483.4 299 73.6
FvH4_6g06571 Fragaria vesca HOM05D005736 ORTHO05D007215 1.7e-134 483.0 303 74.6
RcHm_v2.0_Chr3g0455751 Rosa chinensis HOM05D005736 ORTHO05D007215 2.2e-134 482.6 303 75.2
SGA_v2.0_scaffold196G40952 Striga asiatica HOM05D005736 ORTHO05D007215 2.2e-134 482.6 304 72.4
Hund07098 Selenicereus undatus HOM05D005736 ORTHO05D007215 2.8e-134 482.3 304 73.7
Ah.06g189800 Amaranthus hybridus HOM05D005736 ORTHO05D007215 3.7e-134 481.9 302 72.8
MD04G1200300 Malus domestica HOM05D005736 ORTHO05D007215 3.7e-134 481.9 305 74.8
PGSC0003DMG400024712 Solanum tuberosum HOM05D005736 ORTHO05D007215 3.7e-134 481.9 299 73.9
Nitab4.5_0003844g0030 Nicotiana tabacum HOM05D005736 ORTHO05D007215 6.3e-134 481.1 299 73.6
CAN.G1459.12 Capsicum annuum HOM05D005736 ORTHO05D007215 8.2e-134 480.7 309 72.2
Gohir.A11G268000 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.1e-133 480.3 299 72.9
AUR62005207 Chenopodium quinoa HOM05D005736 ORTHO05D007215 1.8e-133 479.6 304 72.7
ClCG02G015270 Citrullus lanatus HOM05D005736 ORTHO05D007215 4.1e-133 478.4 303 73.3
Cc02_g34150 Coffea canephora HOM05D005736 ORTHO05D007215 4.1e-133 478.4 308 72.4
Peaxi162Scf00037g01216 Petunia axillaris HOM05D005736 ORTHO05D007215 4.1e-133 478.4 300 74.0
Ciclev10001982m.g Citrus clementina HOM05D005736 ORTHO05D007215 9.1e-133 477.2 295 74.6
Sopen01g043240 Solanum pennellii HOM05D005736 ORTHO05D007215 9.1e-133 477.2 299 73.6
Oeu043344.1 Olea europaea HOM05D005736 ORTHO05D007215 1.6e-132 476.5 304 71.7
Solyc09g065950.3 Solanum lycopersicum HOM05D005736 ORTHO05D007215 2.7e-132 475.7 299 72.9
EL10Ac4g09914 Beta vulgaris HOM05D005736 ORTHO05D007215 5.9e-132 474.6 308 71.8
Manes.09G170200 Manihot esculenta HOM05D005736 ORTHO05D007215 5.9e-132 474.6 304 74.3
ECA234G1428 Erigeron canadensis HOM05D005736 ORTHO05D007215 1.0e-131 473.8 295 73.6
HanXRQChr16g0513361 Helianthus annuus HOM05D005736 ORTHO05D007215 1.3e-131 473.4 306 71.9
HanXRQChr10g0296691 Helianthus annuus HOM05D005736 ORTHO05D007215 1.7e-131 473.0 304 73.0
Cfa006630 Carpinus fangiana HOM05D005736 ORTHO05D007215 2.5e-130 469.2 303 71.9
CsaV3_2G006740 Cucumis sativus L. HOM05D005736 ORTHO05D007215 3.2e-130 468.8 303 71.9
Migut.N02084 Erythranthe guttata HOM05D005736 ORTHO05D007215 5.5e-130 468.0 305 71.8
THA.LOC104818718 Tarenaya hassleriana HOM05D005736 ORTHO05D007215 5.5e-130 468.0 301 70.4
ATR0796G081 Amborella trichopoda HOM05D005736 ORTHO05D007215 1.2e-129 466.8 300 71.3
CDE02G3291 Ceratophyllum demersum HOM05D005736 ORTHO05D007215 1.2e-129 466.8 304 73.4
Migut.O00559 Erythranthe guttata HOM05D005736 ORTHO05D007215 1.6e-129 466.5 305 71.5
Sed0015517 Sechium edule HOM05D005736 ORTHO05D007215 2.3e-128 462.6 302 70.5
FAN09G2204 Fragaria x ananassa HOM05D001134 ORTHO05D007215 6.8e-128 461.1 303 72.9
Gohir.A11G294600 Gossypium hirsutum HOM05D005736 ORTHO05D007215 8.8e-128 460.7 300 70.7
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 2.0e-127 459.5 303 72.6
Aa31LG5G15870 Aethionema arabicum HOM05D005736 ORTHO05D007215 2.6e-127 459.1 306 68.3
MSTRG.20415 Avicennia marina HOM05D005736 ORTHO05D007215 7.5e-127 457.6 305 70.5
vmacro04813 Vaccinium macrocarpon HOM05D005736 ORTHO05D007215 9.8e-127 457.2 372 61.0
BNapus_Darmor_BZH_scaffold_114p00020 Brassica napus HOM05D005736 ORTHO05D007215 8.3e-126 454.1 306 67.0
BraSC132t45500Z Brassica rapa HOM05D005736 ORTHO05D007215 8.3e-126 454.1 306 66.7
Rhsim07G0188500 Rhododendron simsii HOM05D002832 ORTHO05D008667 1.8e-125 453.0 380 58.9
FAN02G0934 Fragaria x ananassa HOM05D005736 ORTHO05D007215 2.4e-125 452.6 340 65.6
AL3G16120 Arabidopsis lyrata HOM05D005736 ORTHO05D007215 4.1e-125 451.8 306 67.0
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 5.4e-125 451.4 313 70.9
BraA03t12591Z Brassica rapa HOM05D005736 ORTHO05D007215 1.6e-124 449.9 306 67.0
Sp3g04350 Schrenkiella parvula HOM05D005736 ORTHO05D007215 3.5e-124 448.7 306 67.0
Dinv30811 Davidia involucrata HOM05D005736 ORTHO05D007215 5.9e-124 448.0 305 70.8
BcaB04g19260 Brassica carinata HOM05D005736 ORTHO05D007215 1.3e-123 446.8 301 67.1
BolC3t16437H Brassica oleracea HOM05D005736 ORTHO05D007215 2.9e-123 445.7 301 66.8
Thhalv10021069m.g Eutrema salsugineum HOM05D005736 ORTHO05D007215 6.5e-123 444.5 311 65.9
AT3G05520 Arabidopsis thaliana HOM05D005736 ORTHO05D007215 1.1e-122 443.7 306 66.3
BcaB04g19261 Brassica carinata HOM05D005736 ORTHO05D007215 1.5e-122 443.4 306 66.3
Gorai.007G341300 Gossypium raimondii HOM05D005736 ORTHO05D007215 1.5e-122 443.4 324 65.1
A03p34170 Brassica napus HOM05D005736 ORTHO05D007215 2.5e-122 442.6 306 66.3
C03p41560 Brassica napus HOM05D005736 ORTHO05D007215 2.5e-122 442.6 301 67.1
CARHR079910 Cardamine hirsuta HOM05D005736 ORTHO05D007215 5.5e-122 441.4 301 66.1
Carub.0003s0481 Capsella rubella HOM05D005736 ORTHO05D007215 9.5e-122 440.7 307 65.1
HPP92_002147 Vanilla planifolia HOM05D005736 ORTHO05D007215 8.0e-121 437.6 302 65.6
BolC1t05691H Brassica oleracea HOM05D005736 ORTHO05D007215 3.0e-120 435.6 314 64.3
Zm00001eb330450 Zea mays HOM05D005736 ORTHO05D007215 4.1e-117 425.2 304 65.5
Eucgr.H04534 Eucalyptus grandis HOM05D005736 ORTHO05D007215 2.9e-115 419.1 271 72.0
Zm00001eb111300 Zea mays HOM05D005736 ORTHO05D007215 2.9e-115 419.1 304 64.8
MELO3C004216.2 Cucumis melo HOM05D005736 ORTHO05D007215 1.9e-114 416.4 303 65.7
Psat3g011440 Pisum sativum HOM05D005736 ORTHO05D007215 1.2e-113 413.7 258 73.3
Cpa.g.sc48.100 Carica papaya HOM05D005736 ORTHO05D007215 2.0e-111 406.4 304 65.1
AUR62000762 Chenopodium quinoa HOM05D005736 ORTHO05D007215 7.8e-108 394.4 258 70.2
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 5.4e-101 371.7 260 66.2
Mapoly0002s0253 Marchantia polymorpha HOM05D005736 ORTHO05D007215 1.1e-98 364.0 301 55.5
Gohir.D11G309300 Gossypium hirsutum HOM05D005736 ORTHO05D007215 5.6e-98 361.7 235 70.6
Os07g0414800 Oryza sativa ssp. japonica HOM05D005736 ORTHO05D007215 4.1e-93 345.5 213 74.2
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 6.6e-91 338.2 301 54.5
RcHm_v2.0_Chr1g0327431 Rosa chinensis HOM05D005736 ORTHO05D007215 8.6e-91 337.8 198 80.3
SMO196G0013 Selaginella moellendorffii HOM05D005736 ORTHO05D007215 2.8e-89 332.8 291 55.0
AagrBONN_evm.TU.Sc2ySwM_344.5036 Anthoceros agrestis HOM05D005736 ORTHO05D007215 3.6e-89 332.4 302 53.3
Actinidia35560 Actinidia chinensis HOM05D002832 ORTHO05D008667 8.9e-88 327.8 264 61.4
unitig_48.g30289 Utricularia gibba HOM05D005736 ORTHO05D007215 1.7e-83 313.5 301 52.2
Nitab4.5_0018629g0010 Nicotiana tabacum HOM05D005736 ORTHO05D007215 9.6e-82 307.8 174 80.5
BcaC09g47830 Brassica carinata HOM05D005736 ORTHO05D007215 6.9e-80 301.6 210 63.8
Sopen09g027740 Solanum pennellii HOM05D005736 ORTHO05D007215 1.5e-79 300.4 174 77.6
Pp3c10_25170 Physcomitrium patens HOM05D005736 ORTHO05D007215 9.3e-69 264.6 237 53.6
Lj5A420T26 Lonicera japonica HOM05D005736 ORTHO05D007215 1.6e-68 263.8 176 72.2
RcHm_v2.0_Chr1g0322221 Rosa chinensis HOM05D005736 ORTHO05D007215 2.1e-68 263.5 186 71.0
RcHm_v2.0_Chr3g0465741 Rosa chinensis HOM05D005736 ORTHO05D007215 2.6e-63 246.5 143 79.7
Pp3c20_23130 Physcomitrium patens HOM05D005736 ORTHO05D007215 3.5e-52 209.5 187 52.9
MBI18_g08112_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 3.3e-50 203.0 130 74.6
BcaB05g23235 Brassica carinata HOM05D005736 ORTHO05D007215 5.7e-50 202.2 170 53.5
Actinidia16814 Actinidia chinensis HOM05D005736 ORTHO05D007215 9.3e-45 184.9 104 80.8
Actinidia16813 Actinidia chinensis HOM05D005736 ORTHO05D007215 1.0e-43 181.4 125 66.4
BcaB04g21446 Brassica carinata HOM05D005736 ORTHO05D007215 3.0e-43 179.9 130 63.8
RcHm_v2.0_Chr1g0322051 Rosa chinensis HOM05D005736 ORTHO05D007215 3.7e-41 172.9 139 59.0
MBI18_g44147_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 1.4e-40 171.0 145 61.4
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 4.6e-36 156.0 101 69.3
RcHm_v2.0_Chr1g0322151 Rosa chinensis HOM05D005736 ORTHO05D007215 9.1e-32 141.7 106 62.3
TAR636G3309 Trochodendron aralioides HOM05D005736 ORTHO05D007215 4.5e-31 139.4 103 60.2
TAR629G2822 Trochodendron aralioides HOM05D005736 ORTHO05D007215 7.7e-31 138.7 103 62.1
MBI18_g08111_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 3.0e-19 100.1 52 82.7
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 1.5e-18 97.8 76 55.3


User provided reference genes

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