Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 1.3e-276 955.7 459 100.0
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 6.0e-245 850.5 422 97.2
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 2.8e-141 506.1 427 60.0
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 5.2e-140 501.9 424 59.4
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 2.1e-133 479.9 428 57.0
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 8.9e-132 474.6 424 54.5
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 1.9e-129 466.8 462 51.3
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 1.2e-128 464.2 426 55.2
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 2.0e-128 463.4 432 56.2
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 3.9e-127 459.1 432 55.6
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 1.1e-126 457.6 428 55.4
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 7.3e-126 454.9 426 53.8
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 1.2e-125 454.1 430 53.3
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 3.6e-125 452.6 427 53.2
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 1.4e-124 450.7 430 55.3
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 1.8e-124 450.3 425 53.6
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 4.0e-124 449.1 428 53.3
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 5.2e-124 448.7 427 53.6
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 5.4e-121 438.7 426 52.8
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 2.1e-120 436.8 427 51.8
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 2.3e-119 433.3 426 52.1
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.5e-118 429.9 425 52.2
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 1.6e-117 427.2 430 52.1
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.4e-116 424.1 425 51.5
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 2.3e-116 423.3 431 52.9
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 6.8e-116 421.8 427 49.6
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 8.9e-116 421.4 425 50.8
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 7.6e-115 418.3 425 51.1
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 9.9e-115 417.9 433 49.4
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 1.3e-114 417.5 428 50.0
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 1.1e-113 414.5 399 54.6
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 1.9e-113 413.7 431 51.0
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 5.4e-113 412.1 426 50.9
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 5.4e-113 412.1 426 50.5
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 6.0e-112 408.7 425 48.5
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 1.3e-111 407.5 432 50.7
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 8.6e-111 404.8 427 49.9
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.5e-110 404.1 502 44.2
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 1.2e-109 401.0 422 50.5
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 3.6e-109 399.4 502 44.4
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 4.7e-109 399.1 413 51.3
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 8.1e-109 398.3 468 46.6
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 1.4e-108 397.5 436 50.9
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 1.8e-108 397.1 410 50.7
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 1.8e-108 397.1 434 50.0
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.8e-108 397.1 434 49.8
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 2.0e-107 393.7 421 48.2
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 2.6e-107 393.3 435 48.3
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 7.6e-107 391.7 418 48.1
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 3.8e-106 389.4 343 56.9
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 5.4e-105 385.6 434 47.5
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 7.1e-105 385.2 434 48.8
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 6.0e-104 382.1 412 50.5
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 7.8e-104 381.7 434 48.4
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 1.9e-102 377.1 433 47.8
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 2.5e-102 376.7 413 47.7
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 1.6e-101 374.0 429 47.3
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 3.6e-101 372.9 431 49.0
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 3.6e-101 372.9 408 48.3
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 3.1e-100 369.8 434 47.2
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 3.1e-100 369.8 446 47.5
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 3.4e-99 366.3 518 41.9
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 1.3e-98 364.4 427 44.5
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 2.9e-98 363.2 378 52.4
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 2.4e-97 360.1 425 44.9
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 9.3e-97 358.2 355 54.6
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 9.3e-97 358.2 446 47.1
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 3.5e-96 356.3 417 47.7
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 1.0e-95 354.8 336 54.5
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 5.1e-95 352.4 427 44.5
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 8.7e-95 351.7 427 45.0
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 2.5e-94 350.1 416 48.1
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 2.1e-93 347.1 351 52.1
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.1e-93 347.1 410 47.3
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 6.2e-93 345.5 393 48.6
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 6.2e-93 345.5 410 47.1
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 5.3e-92 342.4 294 57.1
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 6.9e-92 342.0 303 56.4
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 5.8e-91 339.0 429 44.3
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 1.3e-87 327.8 425 44.2
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 6.2e-85 318.9 433 42.3
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 1.3e-82 311.2 310 51.0
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 2.2e-82 310.5 412 45.4
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 4.2e-81 306.2 348 47.7
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 1.9e-73 280.8 441 39.0
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 9.3e-73 278.5 476 38.9
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 3.3e-70 270.0 495 37.8
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 3.4e-67 260.0 278 48.2
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 5.7e-54 216.1 364 36.3
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 2.0e-51 207.6 207 51.7
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 3.6e-48 196.8 190 51.6
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.1e-44 185.3 223 46.2
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 1.2e-30 138.7 168 43.5
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 5.6e-25 119.8 136 47.1
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 1.2e-19 102.1 153 39.2
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 5.0e-18 96.7 74 59.5
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 3.3e-17 94.0 130 39.2
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 4.7e-16 90.1 63 65.1
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 8.9e-15 85.9 90 45.6
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 1.2e-14 85.5 72 50.0
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 3.4e-14 84.0 113 40.7
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 2.4e-12 77.8 67 53.7
Gohir.D09G009000 Gossypium hirsutum HOM05D005508 ORTHO05D006882 1.9e-09 68.2 305 26.6
Gorai.006G010700 Gossypium raimondii HOM05D005508 ORTHO05D006882 1.9e-09 68.2 305 26.6
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 2.5e-09 67.8 161 32.3
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 2.5e-09 67.8 161 32.3
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 7.3e-09 66.2 235 26.4
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 1.2e-08 65.5 62 51.6
Gohir.A09G009900 Gossypium hirsutum HOM05D005508 ORTHO05D006882 2.1e-08 64.7 302 26.2
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 1.1e-07 62.4 51 52.9
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 1.1e-07 62.4 290 26.2
PSO063G1271 Papaver somniferum HOM05D004758 ORTHO05D006063 1.8e-07 61.6 154 27.3
PSO782G4173 Papaver somniferum HOM05D004758 ORTHO05D006063 3.1e-07 60.8 154 27.3
RcHm_v2.0_Chr5g0074871 Rosa chinensis HOM05D005961 ORTHO05D007391 3.1e-07 60.8 200 26.0
FvH4_3g41780 Fragaria vesca HOM05D005961 ORTHO05D007391 6.8e-07 59.7 226 24.8
FAN16G0538 Fragaria x ananassa HOM05D005961 ORTHO05D007391 6.8e-07 59.7 226 24.8
Zm00001eb121510 Zea mays HOM05D001335 ORTHO05D001184 6.8e-07 59.7 162 29.0
FAN21G0779 Fragaria x ananassa HOM05D005961 ORTHO05D007391 1.5e-06 58.5 201 25.9
FAN11G3665 Fragaria x ananassa HOM05D005961 ORTHO05D007391 2.0e-06 58.2 201 25.4
Ah.05g168380 Amaranthus hybridus HOM05D004758 ORTHO05D006063 2.6e-06 57.8 157 26.1
TAR375G0794 Trochodendron aralioides HOM05D004758 ORTHO05D006063 2.6e-06 57.8 116 31.9
Thecc.05G217400 Theobroma cacao HOM05D004758 ORTHO05D006063 3.4e-06 57.4 157 30.6
AUR62034925 Chenopodium quinoa HOM05D004758 ORTHO05D006063 4.4e-06 57.0 157 27.4
Cfa022606 Carpinus fangiana HOM05D005544 ORTHO05D007303 7.5e-06 56.2 205 26.8
HanXRQChr17g0551711 Helianthus annuus HOM05D005508 ORTHO05D006882 9.9e-06 55.8 116 29.3


User provided reference genes

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