Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 1.1e-201 706.4 363 100.0
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 4.5e-195 684.5 363 97.0
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 8.4e-101 371.3 365 56.2
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 6.9e-95 351.7 352 56.0
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 4.5e-94 349.0 365 55.1
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 7.6e-94 348.2 342 57.0
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 1.3e-93 347.4 326 56.4
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 2.9e-93 346.3 299 61.9
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 3.8e-93 345.9 366 52.5
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 8.4e-93 344.7 369 53.1
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 3.2e-92 342.8 369 52.8
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 5.4e-92 342.0 295 60.7
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 2.7e-91 339.7 367 53.1
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 3.5e-91 339.3 308 59.7
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 4.6e-91 339.0 291 59.8
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 6.0e-91 338.6 366 52.7
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 6.0e-91 338.6 296 59.1
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 6.0e-91 338.6 292 59.6
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 1.0e-90 337.8 328 56.1
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.3e-90 337.4 308 58.4
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.8e-90 337.0 364 51.1
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 3.0e-90 336.3 328 54.3
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 3.9e-90 335.9 326 56.7
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 5.1e-90 335.5 366 53.3
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 8.7e-90 334.7 331 55.6
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 8.7e-90 334.7 348 54.0
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 1.9e-89 333.6 328 55.2
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 2.5e-89 333.2 292 58.9
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 2.5e-89 333.2 296 59.5
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 9.6e-89 331.3 368 51.1
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 9.6e-89 331.3 304 58.6
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.1e-88 330.1 299 59.2
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 4.8e-88 328.9 305 57.7
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 6.2e-88 328.6 330 55.5
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.4e-87 327.4 299 59.2
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 5.3e-87 325.5 311 56.9
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 2.0e-86 323.6 294 58.8
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 4.5e-86 322.4 369 50.4
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 5.8e-86 322.0 366 50.8
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 5.8e-86 322.0 366 50.5
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 5.8e-86 322.0 259 62.2
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 9.9e-86 321.2 367 53.4
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 9.9e-86 321.2 331 52.6
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 9.9e-86 321.2 366 49.5
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.3e-85 320.9 366 49.5
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 2.2e-85 320.1 272 61.0
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 3.2e-84 316.2 305 57.4
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.2e-83 314.3 316 53.8
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 2.7e-83 313.2 272 60.3
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.6e-83 312.4 276 59.4
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 1.0e-82 311.2 259 58.7
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.3e-82 310.8 315 52.1
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 1.8e-82 310.5 290 54.1
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 2.3e-82 310.1 297 56.9
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 3.0e-82 309.7 371 49.1
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 3.0e-82 309.7 288 54.2
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 3.9e-82 309.3 259 60.2
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 2.5e-81 306.6 298 56.7
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 1.3e-80 304.3 288 55.6
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 2.1e-80 303.5 292 54.1
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 6.2e-80 302.0 273 57.5
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 1.1e-79 301.2 284 57.0
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.4e-79 300.8 349 49.0
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 1.4e-79 300.8 335 51.9
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 1.8e-79 300.4 367 47.1
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 2.4e-79 300.1 297 54.5
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 2.4e-79 300.1 270 57.0
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 3.1e-79 299.7 316 51.6
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 5.3e-79 298.9 297 54.2
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 6.9e-79 298.5 299 54.8
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 1.5e-78 297.4 283 56.5
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 1.5e-78 297.4 307 54.1
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 1.5e-78 297.4 304 54.9
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 1.5e-78 297.4 304 53.0
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 2.6e-78 296.6 304 54.6
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 3.4e-78 296.2 297 53.2
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 5.8e-78 295.4 345 47.0
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.7e-77 293.9 284 54.9
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 1.7e-77 293.9 296 52.7
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 1.7e-77 293.9 305 53.4
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 2.9e-77 293.1 272 57.0
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 8.4e-77 291.6 269 58.4
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 2.5e-76 290.0 315 51.7
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 2.5e-76 290.0 283 55.5
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 4.2e-76 289.3 276 55.8
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 4.2e-76 289.3 297 50.5
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 5.5e-76 288.9 280 56.1
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 7.1e-76 288.5 280 56.1
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 2.7e-75 286.6 272 55.1
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 3.0e-74 283.1 306 52.9
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 3.9e-74 282.7 274 54.7
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 6.7e-74 282.0 266 53.0
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 3.3e-73 279.6 307 52.1
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 3.7e-72 276.2 270 54.8
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 1.4e-71 274.2 313 49.5
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 2.0e-70 270.4 330 48.5
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 4.5e-70 269.2 334 47.9
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 3.8e-69 266.2 261 54.4
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 3.8e-69 266.2 235 57.9
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.2e-67 261.2 215 60.0
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 1.6e-67 260.8 271 52.4
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 4.3e-65 252.7 235 57.4
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.4e-60 237.7 261 51.0
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 1.2e-59 234.6 240 53.3
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.3e-45 188.0 176 58.0
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 2.7e-38 163.7 162 54.9
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 1.6e-30 137.9 139 54.0
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.7e-29 134.4 311 33.4
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.5e-17 94.7 199 36.2
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 1.7e-16 91.3 133 45.1
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 2.4e-15 87.4 79 58.2
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 2.3e-13 80.9 294 26.2
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 4.0e-10 70.1 83 50.6
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 1.9e-07 61.2 260 25.4
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 1.6e-06 58.2 76 50.0


User provided reference genes

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