Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 0.0e+00 1407.5 727 100.0
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 0.0e+00 1374.8 727 97.5
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 5.4e-216 755.0 688 58.9
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 1.0e-214 750.7 681 60.2
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 6.2e-212 741.5 688 57.1
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 1.1e-208 730.7 616 61.9
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 5.4e-208 728.4 688 57.6
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 2.3e-206 723.0 696 56.9
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 1.8e-203 713.4 677 57.2
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 2.4e-203 713.0 699 55.5
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 6.8e-203 711.4 677 56.9
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 1.5e-202 710.3 681 57.6
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 4.4e-202 708.8 684 56.1
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 5.8e-202 708.4 673 56.9
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 1.1e-200 704.1 705 56.2
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 4.2e-200 702.2 680 55.9
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 7.1e-200 701.4 691 55.4
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 1.2e-199 700.7 653 58.2
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 1.6e-199 700.3 666 56.8
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 6.0e-199 698.4 696 54.6
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 7.8e-199 698.0 696 55.6
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 1.0e-198 697.6 695 55.5
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 3.0e-198 696.0 652 57.7
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 3.9e-198 695.7 698 55.6
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 6.6e-198 694.9 668 54.3
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 1.9e-197 693.3 657 56.0
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 4.3e-197 692.2 666 56.3
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 5.6e-197 691.8 696 55.6
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 1.2e-196 690.6 696 54.3
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 1.2e-194 684.1 649 57.2
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 1.7e-193 680.2 702 53.3
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 2.9e-193 679.5 704 52.1
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 1.9e-192 676.8 646 57.6
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 7.1e-192 674.9 667 56.5
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 9.3e-192 674.5 705 53.9
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 2.1e-191 673.3 672 56.1
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 2.7e-191 672.9 672 55.8
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 1.0e-190 671.0 685 53.6
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.0e-190 671.0 660 54.4
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 1.7e-190 670.2 681 55.4
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 1.7e-190 670.2 672 55.8
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 2.3e-190 669.8 664 53.3
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 6.6e-190 668.3 679 54.9
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 7.3e-189 664.8 695 51.1
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 2.8e-188 662.9 667 54.6
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 6.2e-188 661.8 679 53.0
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 1.1e-187 661.0 656 55.3
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 5.3e-187 658.7 674 53.6
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 1.2e-186 657.5 673 53.8
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 1.5e-186 657.1 691 51.8
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 2.0e-186 656.8 700 51.1
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 5.8e-186 655.2 696 51.9
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 7.6e-186 654.8 690 54.5
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 9.9e-186 654.4 703 53.1
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 3.8e-185 652.5 729 52.9
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 4.9e-185 652.1 652 56.1
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 8.4e-185 651.4 646 56.5
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 1.4e-184 650.6 651 55.0
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 4.2e-184 649.0 731 53.2
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 4.2e-184 649.0 703 52.8
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 4.2e-184 649.0 702 52.1
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 1.2e-183 647.5 659 54.2
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 4.6e-183 645.6 672 51.9
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 6.0e-183 645.2 773 49.4
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 3.0e-182 642.9 731 52.4
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 3.0e-182 642.9 702 53.7
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 8.7e-182 641.3 683 50.7
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.9e-181 640.2 671 54.8
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 4.3e-181 639.0 653 55.0
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 5.6e-181 638.6 683 50.5
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 7.4e-181 638.3 673 52.0
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 1.3e-180 637.5 626 54.6
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 1.3e-180 637.5 661 51.7
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 1.6e-180 637.1 721 50.8
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 4.8e-180 635.6 671 50.8
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 6.2e-180 635.2 682 50.1
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 1.4e-179 634.0 681 50.1
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.2e-178 630.9 738 51.1
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 9.9e-178 627.9 671 50.8
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 9.9e-178 627.9 695 51.7
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 9.9e-178 627.9 617 55.8
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 8.4e-177 624.8 615 54.3
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.4e-176 624.0 747 49.9
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 5.5e-176 622.1 747 50.1
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 9.3e-176 621.3 694 50.0
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 4.6e-175 619.0 618 54.2
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.0e-174 617.8 644 51.9
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 1.8e-174 617.1 677 51.1
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 1.5e-173 614.0 696 47.8
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 9.6e-173 611.3 682 49.4
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 1.3e-172 610.9 709 48.4
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 3.7e-172 609.4 556 59.7
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 6.2e-172 608.6 672 49.9
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 6.2e-172 608.6 589 55.3
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.1e-171 607.8 621 53.0
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 1.1e-171 607.8 699 48.1
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 4.0e-171 605.9 756 48.8
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 1.2e-170 604.4 654 52.6
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 1.0e-169 601.3 684 48.2
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 3.8e-169 599.4 664 52.0
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 3.5e-167 592.8 591 54.8
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 4.6e-167 592.4 665 49.3
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 3.9e-166 589.3 677 50.7
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 3.3e-165 586.3 644 49.2
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 1.3e-164 584.3 722 48.1
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 4.8e-164 582.4 683 48.9
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 1.2e-162 577.8 669 48.6
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 1.2e-162 577.8 638 50.0
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 1.5e-162 577.4 691 46.9
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 2.0e-162 577.0 672 49.0
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 2.6e-162 576.6 658 48.5
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 3.4e-162 576.2 640 50.8
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 1.0e-161 574.7 682 48.2
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 1.4e-158 564.3 683 46.3
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 1.4e-158 564.3 710 46.8
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 3.3e-157 559.7 663 47.2
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 4.3e-157 559.3 663 47.2
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 9.7e-157 558.1 708 45.6
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 3.1e-155 553.1 673 46.8
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 2.6e-154 550.1 696 45.7
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 7.7e-154 548.5 741 45.1
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 6.5e-153 545.4 671 48.6
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 4.2e-152 542.7 616 50.3
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 7.2e-152 542.0 662 45.8
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 7.0e-147 525.4 655 46.3
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 5.9e-146 522.3 668 47.9
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 6.5e-145 518.8 639 47.3
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 5.9e-138 495.7 476 56.9
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 1.7e-137 494.2 513 52.8
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 2.9e-137 493.4 702 44.6
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.7e-132 477.6 519 53.0
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 4.2e-128 463.0 657 42.9
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 3.4e-117 426.8 503 48.3
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 8.3e-116 422.2 735 38.8
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 2.5e-112 410.6 484 47.7
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 3.4e-109 400.2 665 40.0
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 5.8e-109 399.4 382 57.1
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 3.2e-107 393.7 661 38.0
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 4.3e-104 383.3 651 38.2
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 7.3e-104 382.5 682 37.0
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 4.0e-102 376.7 665 36.8
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 6.0e-98 362.8 651 37.0
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 7.3e-96 355.9 650 36.5
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.1e-94 352.1 374 51.9
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 3.7e-92 343.6 747 34.0
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.9e-91 341.3 665 36.5
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 1.2e-90 338.6 798 32.3
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 2.5e-88 330.9 813 33.2
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 5.2e-86 323.2 691 35.7
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 6.8e-86 322.8 519 38.3
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 1.1e-78 298.9 710 32.8
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 5.4e-75 286.6 612 33.0
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 6.0e-74 283.1 526 35.7
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 6.6e-73 279.6 216 65.7
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 2.5e-72 277.7 343 44.0
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 7.3e-72 276.2 291 54.0
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 1.4e-70 271.9 525 36.6
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 2.2e-68 264.6 220 61.4
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 4.0e-62 243.8 498 34.1
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 7.9e-50 203.0 353 36.5
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 5.3e-30 137.1 280 34.3
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.5e-27 129.0 102 64.7
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 1.5e-24 119.0 193 39.4
Hund15378 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.7e-20 105.5 111 53.2
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.4e-17 95.9 116 48.3
CiPaw.04G110700 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.8e-17 95.5 66 72.7
C09p40870 Brassica napus HOM05D003996 ORTHO05D004665 7.5e-16 90.1 70 64.3
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 1.4e-14 85.9 165 36.4
unitig_26.g9925 Utricularia gibba HOM05D003996 ORTHO05D004665 2.2e-12 78.6 52 71.2
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 2.5e-11 75.1 148 35.1
Os05g0597400 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 4.0e-09 67.8 53 56.6
BcaC09g50171 Brassica carinata HOM05D003996 ORTHO05D092235 1.4e-06 59.3 48 56.2


User provided reference genes

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